RNA–Protein interactions for RNA: ENST00000370206.8

CNN3-201, Transcript of calponin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-201ENST00000370206 A0A1B0GU33 70 aa11.38□□□□□ -0.59
CNN3-201ENST00000370206 RBM12B-AS1Q9P1G2 102 aa11.38□□□□□ -0.59
CNN3-201ENST00000370206 H1FX-AS1Q4G0G2 97 aa11.37□□□□□ -0.59
CNN3-201ENST00000370206 KIAA1109Q2LD37 5005 aa11.28□□□□□ -0.6
CNN3-201ENST00000370206 KRTAP3-3Q9BYR6 98 aa11.27□□□□□ -0.6
CNN3-201ENST00000370206 ADM2Q7Z4H4 148 aa11.26□□□□□ -0.61
CNN3-201ENST00000370206 PRAC1Q96KF2 57 aa11.26□□□□□ -0.61
CNN3-201ENST00000370206 MYCBP2O75592 4640 aa11.24□□□□□ -0.61
CNN3-201ENST00000370206 S4R3F8 94 aa11.19□□□□□ -0.62
CNN3-201ENST00000370206 TPRXLQ17RH7 258 aa11.14□□□□□ -0.63
CNN3-201ENST00000370206 KRTAP10-6P60371 365 aaPredicted RBP11.12□□□□□ -0.63
CNN3-201ENST00000370206 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
CNN3-201ENST00000370206 EPPK1P58107 5090 aaKnown RBP11.01□□□□□ -0.65
CNN3-201ENST00000370206 K7ERS5 55 aa10.97□□□□□ -0.65
CNN3-201ENST00000370206 CSAG1Q6PB30 78 aa10.97□□□□□ -0.65
CNN3-201ENST00000370206 KRTAP4-5Q9BYR2 181 aa10.96□□□□□ -0.65
CNN3-201ENST00000370206 KRTAP13-4Q3LI77 160 aa10.96□□□□□ -0.66
CNN3-201ENST00000370206 LRP2P98164 4655 aa10.93□□□□□ -0.66
CNN3-201ENST00000370206 P0C880 135 aa10.91□□□□□ -0.66
CNN3-201ENST00000370206 LPAP08519 4548 aa10.89□□□□□ -0.67
CNN3-201ENST00000370206 LINC01554Q52M75 96 aa10.85□□□□□ -0.67
CNN3-201ENST00000370206 A0A0D9SG42 100 aa10.82□□□□□ -0.68
CNN3-201ENST00000370206 KRTAP25-1Q3LHN0 102 aa10.74□□□□□ -0.69
CNN3-201ENST00000370206 ABCA13Q86UQ4 5058 aa10.74□□□□□ -0.69
CNN3-201ENST00000370206 SEC61BP60468 96 aaKnown RBP10.72□□□□□ -0.69
CNN3-201ENST00000370206 ROMO1P60602 79 aa10.7□□□□□ -0.7
CNN3-201ENST00000370206 J3QL48 77 aa10.64□□□□□ -0.71
CNN3-201ENST00000370206 M0QZ58 72 aa10.61□□□□□ -0.71
CNN3-201ENST00000370206 KRTAP12-2P59991 146 aa10.59□□□□□ -0.71
CNN3-201ENST00000370206 CRIPTQ9P021 101 aa10.56□□□□□ -0.72
CNN3-201ENST00000370206 KRTAP12-1P59990 96 aa10.55□□□□□ -0.72
CNN3-201ENST00000370206 KRTAP4-1Q9BYQ7 146 aa10.55□□□□□ -0.72
CNN3-201ENST00000370206 MUC17Q685J3 4493 aa10.51□□□□□ -0.73
CNN3-201ENST00000370206 SPINT4Q6UDR6 99 aa10.48□□□□□ -0.73
CNN3-201ENST00000370206 HERC2O95714 4834 aa10.45□□□□□ -0.74
CNN3-201ENST00000370206 KRTAP19-2Q3LHN2 52 aa10.39□□□□□ -0.75
CNN3-201ENST00000370206 R4GN34 69 aa10.35□□□□□ -0.75
CNN3-201ENST00000370206 BIRC6Q9NR09 4857 aa10.26□□□□□ -0.77
CNN3-201ENST00000370206 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
CNN3-201ENST00000370206 C10orf95Q9H7T3 257 aa10.25□□□□□ -0.77
CNN3-201ENST00000370206 FLGP20930 4061 aaPredicted RBP9.98□□□□□ -0.81
CNN3-201ENST00000370206 MUC2Q02817 5179 aa9.92□□□□□ -0.82
CNN3-201ENST00000370206 HMCN2Q8NDA2 5059 aa9.89□□□□□ -0.83
CNN3-201ENST00000370206 HERC1Q15751 4861 aa9.88□□□□□ -0.83
CNN3-201ENST00000370206 PCLOQ9Y6V0 5065 aa9.84□□□□□ -0.83
CNN3-201ENST00000370206 LCE2CQ5TA81 110 aa9.82□□□□□ -0.84
CNN3-201ENST00000370206 CAMK2N1Q7Z7J9 78 aa9.8□□□□□ -0.84
CNN3-201ENST00000370206 KRTAP15-1Q3LI76 137 aa9.75□□□□□ -0.85
CNN3-201ENST00000370206 PP632Q6XCG6 107 aa9.57□□□□□ -0.88
CNN3-201ENST00000370206 MT1HP80294 61 aa9.56□□□□□ -0.88
CNN3-201ENST00000370206 H3BS24 57 aa9.55□□□□□ -0.88
CNN3-201ENST00000370206 SPRR2GQ9BYE4 73 aa9.55□□□□□ -0.88
CNN3-201ENST00000370206 FAT4Q6V0I7 4981 aa9.52□□□□□ -0.88
CNN3-201ENST00000370206 M0R2T5 61 aa9.52□□□□□ -0.89
CNN3-201ENST00000370206 KRTAP19-1Q8IUB9 90 aa9.48□□□□□ -0.89
CNN3-201ENST00000370206 TNP1P09430 55 aa9.44□□□□□ -0.9
CNN3-201ENST00000370206 PLAC4Q8WY50 150 aa9.42□□□□□ -0.9
CNN3-201ENST00000370206 RNF213Q63HN8 5207 aa9.39□□□□□ -0.91
CNN3-201ENST00000370206 NDUFAF8A1L188 74 aa9.37□□□□□ -0.91
CNN3-201ENST00000370206 MT2AP02795 61 aa9.37□□□□□ -0.91
CNN3-201ENST00000370206 MT1FP04733 61 aa9.36□□□□□ -0.91
CNN3-201ENST00000370206 KRTAP23-1A1A580 65 aa9.34□□□□□ -0.91
CNN3-201ENST00000370206 UBR4Q5T4S7 5183 aa9.34□□□□□ -0.91
CNN3-201ENST00000370206 KRTAP10-10P60014 251 aa9.32□□□□□ -0.92
CNN3-201ENST00000370206 KRTAP9-8Q9BYQ0 159 aa9.32□□□□□ -0.92
CNN3-201ENST00000370206 KRTAP19-8Q3LI54 63 aa9.17□□□□□ -0.94
CNN3-201ENST00000370206 MT1BP07438 61 aa9.03□□□□□ -0.96
CNN3-201ENST00000370206 LCE3AQ5TA76 89 aa8.96□□□□□ -0.98
CNN3-201ENST00000370206 KRTAP9-3Q9BYQ3 159 aa8.94□□□□□ -0.98
CNN3-201ENST00000370206 KRTAP10-5P60370 271 aa8.92□□□□□ -0.98
CNN3-201ENST00000370206 LUZP6Q538Z0 58 aa8.92□□□□□ -0.98
CNN3-201ENST00000370206 MT1XP80297 61 aa8.92□□□□□ -0.98
CNN3-201ENST00000370206 SPRR5A0A1B0GTR4 108 aa8.86□□□□□ -0.99
CNN3-201ENST00000370206 KRTAP8-1Q8IUC2 63 aa8.77□□□□□ -1.01
CNN3-201ENST00000370206 KRTAP10-12P60413 245 aa8.69□□□□□ -1.02
CNN3-201ENST00000370206 PRO2289Q9P1D8 64 aa8.63□□□□□ -1.03
CNN3-201ENST00000370206 KRTAP10-7P60409 375 aaPredicted RBP8.62□□□□□ -1.03
CNN3-201ENST00000370206 LCE2BO14633 110 aa8.59□□□□□ -1.03
CNN3-201ENST00000370206 LCE2AQ5TA79 106 aaPredicted RBP8.58□□□□□ -1.04
CNN3-201ENST00000370206 KRTAP12-3P60328 96 aa8.55□□□□□ -1.04
CNN3-201ENST00000370206 A0A0A0MQY5 61 aa8.33□□□□□ -1.08
CNN3-201ENST00000370206 KRTAP19-5Q3LI72 72 aa8.24□□□□□ -1.09
CNN3-201ENST00000370206 USH2AO75445 5202 aa8.16□□□□□ -1.1
CNN3-201ENST00000370206 KRTAP4-8A0A0G2JLE6 195 aa8.1□□□□□ -1.11
CNN3-201ENST00000370206 KRTAP4-8Q9BYQ9 185 aa8.1□□□□□ -1.11
CNN3-201ENST00000370206 LCE3CQ5T5A8 94 aa8.04□□□□□ -1.12
CNN3-201ENST00000370206 KMT2DO14686 5537 aa7.95□□□□□ -1.14
CNN3-201ENST00000370206 KRTAP19-7Q3SYF9 63 aa7.94□□□□□ -1.14
CNN3-201ENST00000370206 SSPOA2VEC9 5147 aa7.82□□□□□ -1.16
CNN3-201ENST00000370206 KRTAP19-6Q3LI70 58 aa7.81□□□□□ -1.16
CNN3-201ENST00000370206 KRTAP19-4Q3LI73 84 aa7.75□□□□□ -1.17
CNN3-201ENST00000370206 MT1EP04732 61 aa7.74□□□□□ -1.17
CNN3-201ENST00000370206 KRTAP9-6A8MVA2 160 aa7.71□□□□□ -1.18
CNN3-201ENST00000370206 MT1LQ93083 61 aa7.71□□□□□ -1.18
CNN3-201ENST00000370206 KRTAP4-7Q9BYR0 210 aa7.66□□□□□ -1.18
CNN3-201ENST00000370206 INE1O15225 51 aa7.63□□□□□ -1.19
CNN3-201ENST00000370206 LCE2DQ5TA82 110 aaPredicted RBP7.44□□□□□ -1.22
CNN3-201ENST00000370206 KRTAP2-3P0C7H8 128 aa7.42□□□□□ -1.22
CNN3-201ENST00000370206 KRTAP2-4Q9BYR9 128 aa7.42□□□□□ -1.22
CNN3-201ENST00000370206 KRTAP2-1Q9BYU5 128 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms