RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 LORP23490 312 aaPredicted RBP5.13□□□□□ -1.59
PLXNA3-201ENST00000369682 DNAH7Q8WXX0 4024 aa5.12□□□□□ -1.59
PLXNA3-201ENST00000369682 KRTAP4-5Q9BYR2 181 aa5.12□□□□□ -1.59
PLXNA3-201ENST00000369682 KMT2AQ03164 3969 aa5.09□□□□□ -1.59
PLXNA3-201ENST00000369682 DNAH2Q9P225 4427 aa5.08□□□□□ -1.6
PLXNA3-201ENST00000369682 ANK2Q01484 3957 aa5.08□□□□□ -1.6
PLXNA3-201ENST00000369682 KRTAP10-4P60372 401 aaPredicted RBP5.07□□□□□ -1.6
PLXNA3-201ENST00000369682 KRTAP10-12P60413 245 aa5.06□□□□□ -1.6
PLXNA3-201ENST00000369682 LCE3AQ5TA76 89 aa5.03□□□□□ -1.6
PLXNA3-201ENST00000369682 VPS13BQ7Z7G8 4022 aa4.98□□□□□ -1.61
PLXNA3-201ENST00000369682 INE1O15225 51 aa4.97□□□□□ -1.61
PLXNA3-201ENST00000369682 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
PLXNA3-201ENST00000369682 PRKDCP78527 4128 aaKnown RBP4.91□□□□□ -1.62
PLXNA3-201ENST00000369682 FRAS1Q86XX4 4008 aa4.9□□□□□ -1.62
PLXNA3-201ENST00000369682 DNAH10Q8IVF4 4471 aa4.9□□□□□ -1.63
PLXNA3-201ENST00000369682 DNAH1Q9P2D7 4330 aa4.89□□□□□ -1.63
PLXNA3-201ENST00000369682 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
PLXNA3-201ENST00000369682 DNAH9Q9NYC9 4486 aa4.78□□□□□ -1.64
PLXNA3-201ENST00000369682 KRTAP4-1Q9BYQ7 146 aa4.77□□□□□ -1.65
PLXNA3-201ENST00000369682 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
PLXNA3-201ENST00000369682 STARD9Q9P2P6 4700 aa4.73□□□□□ -1.65
PLXNA3-201ENST00000369682 DNAH11Q96DT5 4516 aa4.68□□□□□ -1.66
PLXNA3-201ENST00000369682 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
PLXNA3-201ENST00000369682 PLECQ15149 4684 aaKnown RBP4.63□□□□□ -1.67
PLXNA3-201ENST00000369682 FAT2Q9NYQ8 4349 aa4.62□□□□□ -1.67
PLXNA3-201ENST00000369682 DNAH17Q9UFH2 4485 aa4.59□□□□□ -1.68
PLXNA3-201ENST00000369682 VPS13DQ5THJ4 4388 aa4.58□□□□□ -1.68
PLXNA3-201ENST00000369682 DYNC2H1Q8NCM8 4307 aaKnown RBP4.57□□□□□ -1.68
PLXNA3-201ENST00000369682 DNAH5Q8TE73 4624 aa4.53□□□□□ -1.68
PLXNA3-201ENST00000369682 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
PLXNA3-201ENST00000369682 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
PLXNA3-201ENST00000369682 DNAH8Q96JB1 4490 aa4.49□□□□□ -1.69
PLXNA3-201ENST00000369682 MT1HP80294 61 aa4.48□□□□□ -1.69
PLXNA3-201ENST00000369682 MT1FP04733 61 aa4.44□□□□□ -1.7
PLXNA3-201ENST00000369682 MT2AP02795 61 aa4.44□□□□□ -1.7
PLXNA3-201ENST00000369682 PKHD1P08F94 4074 aa4.42□□□□□ -1.7
PLXNA3-201ENST00000369682 SPRR2GQ9BYE4 73 aa4.39□□□□□ -1.71
PLXNA3-201ENST00000369682 KRTAP17-1Q9BYP8 105 aa4.36□□□□□ -1.71
PLXNA3-201ENST00000369682 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
PLXNA3-201ENST00000369682 DNHD1Q96M86 4753 aa4.35□□□□□ -1.71
PLXNA3-201ENST00000369682 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
PLXNA3-201ENST00000369682 FLGP20930 4061 aaPredicted RBP4.32□□□□□ -1.72
PLXNA3-201ENST00000369682 LRP1BQ9NZR2 4599 aa4.31□□□□□ -1.72
PLXNA3-201ENST00000369682 FAT1Q14517 4588 aa4.31□□□□□ -1.72
PLXNA3-201ENST00000369682 PKD1P98161 4303 aa4.25□□□□□ -1.73
PLXNA3-201ENST00000369682 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
PLXNA3-201ENST00000369682 LCE3BQ5TA77 95 aa4.24□□□□□ -1.73
PLXNA3-201ENST00000369682 MYCBP2O75592 4640 aa4.24□□□□□ -1.73
PLXNA3-201ENST00000369682 PKHD1L1Q86WI1 4243 aa4.23□□□□□ -1.73
PLXNA3-201ENST00000369682 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
PLXNA3-201ENST00000369682 APOBP04114 4563 aaKnown RBP4.21□□□□□ -1.74
PLXNA3-201ENST00000369682 SACSQ9NZJ4 4579 aa4.2□□□□□ -1.74
PLXNA3-201ENST00000369682 DYNC1H1Q14204 4646 aaKnown RBP4.16□□□□□ -1.74
PLXNA3-201ENST00000369682 LRP1Q07954 4544 aaKnown RBP4.15□□□□□ -1.75
PLXNA3-201ENST00000369682 MT1XP80297 61 aa4.14□□□□□ -1.75
PLXNA3-201ENST00000369682 MT1GP13640 62 aa4.13□□□□□ -1.75
PLXNA3-201ENST00000369682 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
PLXNA3-201ENST00000369682 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
PLXNA3-201ENST00000369682 KRTAP4-8A0A0G2JLE6 195 aa4.07□□□□□ -1.76
PLXNA3-201ENST00000369682 KRTAP4-8Q9BYQ9 185 aa4.07□□□□□ -1.76
PLXNA3-201ENST00000369682 RYR1P21817 5038 aa4.06□□□□□ -1.76
PLXNA3-201ENST00000369682 TNXBP22105 4242 aa4.06□□□□□ -1.76
PLXNA3-201ENST00000369682 RYR3Q15413 4870 aa4.06□□□□□ -1.76
PLXNA3-201ENST00000369682 HSPG2P98160 4391 aa4.04□□□□□ -1.76
PLXNA3-201ENST00000369682 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
PLXNA3-201ENST00000369682 FAT3Q8TDW7 4589 aa4.03□□□□□ -1.76
PLXNA3-201ENST00000369682 KRTAP19-8Q3LI54 63 aa4.01□□□□□ -1.77
PLXNA3-201ENST00000369682 MT1BP07438 61 aa3.97□□□□□ -1.77
PLXNA3-201ENST00000369682 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
PLXNA3-201ENST00000369682 KRTAP9-8Q9BYQ0 159 aa3.93□□□□□ -1.78
PLXNA3-201ENST00000369682 SPRR2EP22531 72 aa3.89□□□□□ -1.79
PLXNA3-201ENST00000369682 SPRR2BP35325 72 aa3.89□□□□□ -1.79
PLXNA3-201ENST00000369682 SPRR2AP35326 72 aa3.89□□□□□ -1.79
PLXNA3-201ENST00000369682 LCE2CQ5TA81 110 aa3.89□□□□□ -1.79
PLXNA3-201ENST00000369682 LRP2P98164 4655 aa3.89□□□□□ -1.79
PLXNA3-201ENST00000369682 LPAP08519 4548 aa3.88□□□□□ -1.79
PLXNA3-201ENST00000369682 HYDINQ4G0P3 5121 aa3.86□□□□□ -1.79
PLXNA3-201ENST00000369682 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
PLXNA3-201ENST00000369682 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
PLXNA3-201ENST00000369682 PCLOQ9Y6V0 5065 aa3.79□□□□□ -1.8
PLXNA3-201ENST00000369682 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
PLXNA3-201ENST00000369682 SPRR2DP22532 72 aa3.76□□□□□ -1.81
PLXNA3-201ENST00000369682 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
PLXNA3-201ENST00000369682 LCE2BO14633 110 aa3.74□□□□□ -1.81
PLXNA3-201ENST00000369682 KRTAP19-2Q3LHN2 52 aa3.74□□□□□ -1.81
PLXNA3-201ENST00000369682 KIAA1109Q2LD37 5005 aa3.74□□□□□ -1.81
PLXNA3-201ENST00000369682 MT1LQ93083 61 aa3.74□□□□□ -1.81
PLXNA3-201ENST00000369682 PRM1P04553 51 aa3.7□□□□□ -1.82
PLXNA3-201ENST00000369682 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
PLXNA3-201ENST00000369682 KMT2CQ8NEZ4 4911 aaKnown RBP3.67□□□□□ -1.82
PLXNA3-201ENST00000369682 RYR2Q92736 4967 aa3.67□□□□□ -1.82
PLXNA3-201ENST00000369682 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
PLXNA3-201ENST00000369682 MT1EP04732 61 aa3.65□□□□□ -1.83
PLXNA3-201ENST00000369682 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
PLXNA3-201ENST00000369682 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
PLXNA3-201ENST00000369682 HERC2O95714 4834 aa3.56□□□□□ -1.84
PLXNA3-201ENST00000369682 MT1MQ8N339 61 aa3.55□□□□□ -1.84
PLXNA3-201ENST00000369682 MT4P47944 62 aa3.53□□□□□ -1.84
PLXNA3-201ENST00000369682 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
PLXNA3-201ENST00000369682 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms