RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 BSNQ9UPA5 3926 aa4.11□□□□□ -1.75
SCAF11-202ENST00000369367 DNAH10Q8IVF4 4471 aa4.11□□□□□ -1.75
SCAF11-202ENST00000369367 DNAH5Q8TE73 4624 aa4.1□□□□□ -1.75
SCAF11-202ENST00000369367 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
SCAF11-202ENST00000369367 INE1O15225 51 aa4.07□□□□□ -1.76
SCAF11-202ENST00000369367 PLECQ15149 4684 aaKnown RBP4.06□□□□□ -1.76
SCAF11-202ENST00000369367 MT2AP02795 61 aa4.05□□□□□ -1.76
SCAF11-202ENST00000369367 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
SCAF11-202ENST00000369367 SPRR2GQ9BYE4 73 aa4.04□□□□□ -1.76
SCAF11-202ENST00000369367 LORP23490 312 aaPredicted RBP4.03□□□□□ -1.76
SCAF11-202ENST00000369367 SVEP1Q4LDE5 3571 aa4.01□□□□□ -1.77
SCAF11-202ENST00000369367 DNHD1Q96M86 4753 aa3.99□□□□□ -1.77
SCAF11-202ENST00000369367 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
SCAF11-202ENST00000369367 AKAP9Q99996 3911 aa3.98□□□□□ -1.77
SCAF11-202ENST00000369367 DNAH2Q9P225 4427 aa3.97□□□□□ -1.77
SCAF11-202ENST00000369367 VPS13DQ5THJ4 4388 aa3.94□□□□□ -1.78
SCAF11-202ENST00000369367 VPS13CQ709C8 3753 aa3.92□□□□□ -1.78
SCAF11-202ENST00000369367 MT1FP04733 61 aa3.92□□□□□ -1.78
SCAF11-202ENST00000369367 DYNC1H1Q14204 4646 aaKnown RBP3.9□□□□□ -1.79
SCAF11-202ENST00000369367 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
SCAF11-202ENST00000369367 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-202ENST00000369367 FAT2Q9NYQ8 4349 aa3.88□□□□□ -1.79
SCAF11-202ENST00000369367 DNAH17Q9UFH2 4485 aa3.88□□□□□ -1.79
SCAF11-202ENST00000369367 ZNF469Q96JG9 3925 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-202ENST00000369367 DYNC2H1Q8NCM8 4307 aaKnown RBP3.85□□□□□ -1.79
SCAF11-202ENST00000369367 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
SCAF11-202ENST00000369367 RYR1P21817 5038 aa3.82□□□□□ -1.8
SCAF11-202ENST00000369367 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
SCAF11-202ENST00000369367 KRTAP19-8Q3LI54 63 aa3.79□□□□□ -1.8
SCAF11-202ENST00000369367 SACSQ9NZJ4 4579 aa3.78□□□□□ -1.8
SCAF11-202ENST00000369367 FAT1Q14517 4588 aa3.78□□□□□ -1.81
SCAF11-202ENST00000369367 ANK2Q01484 3957 aa3.77□□□□□ -1.81
SCAF11-202ENST00000369367 DNAH3Q8TD57 4116 aa3.76□□□□□ -1.81
SCAF11-202ENST00000369367 STARD9Q9P2P6 4700 aa3.74□□□□□ -1.81
SCAF11-202ENST00000369367 DNAH6Q9C0G6 4158 aa3.74□□□□□ -1.81
SCAF11-202ENST00000369367 PRKDCP78527 4128 aaKnown RBP3.74□□□□□ -1.81
SCAF11-202ENST00000369367 CSMD3Q7Z407 3707 aa3.74□□□□□ -1.81
SCAF11-202ENST00000369367 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
SCAF11-202ENST00000369367 SPRR2EP22531 72 aa3.71□□□□□ -1.82
SCAF11-202ENST00000369367 SPRR2BP35325 72 aa3.71□□□□□ -1.82
SCAF11-202ENST00000369367 SPRR2AP35326 72 aa3.71□□□□□ -1.82
SCAF11-202ENST00000369367 DNAH8Q96JB1 4490 aa3.69□□□□□ -1.82
SCAF11-202ENST00000369367 RYR3Q15413 4870 aa3.69□□□□□ -1.82
SCAF11-202ENST00000369367 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
SCAF11-202ENST00000369367 KRTAP19-1Q8IUB9 90 aa3.67□□□□□ -1.82
SCAF11-202ENST00000369367 LRP1Q07954 4544 aaKnown RBP3.66□□□□□ -1.82
SCAF11-202ENST00000369367 KRTAP17-1Q9BYP8 105 aa3.63□□□□□ -1.83
SCAF11-202ENST00000369367 RYR2Q92736 4967 aa3.63□□□□□ -1.83
SCAF11-202ENST00000369367 FAT3Q8TDW7 4589 aa3.62□□□□□ -1.83
SCAF11-202ENST00000369367 KRTAP9-8Q9BYQ0 159 aa3.62□□□□□ -1.83
SCAF11-202ENST00000369367 DNAH7Q8WXX0 4024 aa3.61□□□□□ -1.83
SCAF11-202ENST00000369367 SPRR2DP22532 72 aa3.61□□□□□ -1.83
SCAF11-202ENST00000369367 VPS13BQ7Z7G8 4022 aa3.61□□□□□ -1.83
SCAF11-202ENST00000369367 APOBP04114 4563 aaKnown RBP3.61□□□□□ -1.83
SCAF11-202ENST00000369367 LCE2BO14633 110 aa3.6□□□□□ -1.83
SCAF11-202ENST00000369367 KIAA1109Q2LD37 5005 aa3.6□□□□□ -1.83
SCAF11-202ENST00000369367 BIRC6Q9NR09 4857 aa3.58□□□□□ -1.84
SCAF11-202ENST00000369367 HERC1Q15751 4861 aa3.57□□□□□ -1.84
SCAF11-202ENST00000369367 KMT2AQ03164 3969 aa3.56□□□□□ -1.84
SCAF11-202ENST00000369367 MT1BP07438 61 aa3.56□□□□□ -1.84
SCAF11-202ENST00000369367 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
SCAF11-202ENST00000369367 MT1XP80297 61 aa3.56□□□□□ -1.84
SCAF11-202ENST00000369367 KRTAP9-3Q9BYQ3 159 aa3.56□□□□□ -1.84
SCAF11-202ENST00000369367 MT1GP13640 62 aa3.55□□□□□ -1.84
SCAF11-202ENST00000369367 LCE2CQ5TA81 110 aa3.54□□□□□ -1.84
SCAF11-202ENST00000369367 HSPG2P98160 4391 aa3.53□□□□□ -1.84
SCAF11-202ENST00000369367 PKHD1L1Q86WI1 4243 aa3.5□□□□□ -1.85
SCAF11-202ENST00000369367 HERC2O95714 4834 aa3.49□□□□□ -1.85
SCAF11-202ENST00000369367 LYSTQ99698 3801 aa3.49□□□□□ -1.85
SCAF11-202ENST00000369367 PKD1P98161 4303 aa3.47□□□□□ -1.85
SCAF11-202ENST00000369367 FRAS1Q86XX4 4008 aa3.46□□□□□ -1.86
SCAF11-202ENST00000369367 CMYA5Q8N3K9 4069 aa3.45□□□□□ -1.86
SCAF11-202ENST00000369367 PCLOQ9Y6V0 5065 aa3.44□□□□□ -1.86
SCAF11-202ENST00000369367 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
SCAF11-202ENST00000369367 KRTAP9-2Q9BYQ4 174 aa3.41□□□□□ -1.86
SCAF11-202ENST00000369367 LCE2DQ5TA82 110 aaPredicted RBP3.4□□□□□ -1.86
SCAF11-202ENST00000369367 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
SCAF11-202ENST00000369367 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
SCAF11-202ENST00000369367 HECTD4Q9Y4D8 3996 aa3.36□□□□□ -1.87
SCAF11-202ENST00000369367 KRTAP19-2Q3LHN2 52 aa3.34□□□□□ -1.87
SCAF11-202ENST00000369367 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
SCAF11-202ENST00000369367 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
SCAF11-202ENST00000369367 KRTAP4-8Q9BYQ9 185 aa3.33□□□□□ -1.88
SCAF11-202ENST00000369367 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
SCAF11-202ENST00000369367 MT1LQ93083 61 aa3.29□□□□□ -1.88
SCAF11-202ENST00000369367 LCE2AQ5TA79 106 aaPredicted RBP3.27□□□□□ -1.89
SCAF11-202ENST00000369367 MT1EP04732 61 aa3.26□□□□□ -1.89
SCAF11-202ENST00000369367 EPPK1P58107 5090 aaKnown RBP3.25□□□□□ -1.89
SCAF11-202ENST00000369367 LRP2P98164 4655 aa3.25□□□□□ -1.89
SCAF11-202ENST00000369367 PKHD1P08F94 4074 aa3.23□□□□□ -1.89
SCAF11-202ENST00000369367 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
SCAF11-202ENST00000369367 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
SCAF11-202ENST00000369367 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
SCAF11-202ENST00000369367 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
SCAF11-202ENST00000369367 MT3P25713 68 aa3.17□□□□□ -1.9
SCAF11-202ENST00000369367 MT1MQ8N339 61 aa3.17□□□□□ -1.9
SCAF11-202ENST00000369367 HYDINQ4G0P3 5121 aa3.13□□□□□ -1.91
SCAF11-202ENST00000369367 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
SCAF11-202ENST00000369367 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
SCAF11-202ENST00000369367 ABCA13Q86UQ4 5058 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms