RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 C20orf166-AS1Q96NR2 134 aa5.67□□□□□ -1.5
LYSMD1-201ENST00000368908 HSPG2P98160 4391 aa5.66□□□□□ -1.5
LYSMD1-201ENST00000368908 RYR1P21817 5038 aa5.63□□□□□ -1.51
LYSMD1-201ENST00000368908 COX6B2Q6YFQ2 88 aa5.62□□□□□ -1.51
LYSMD1-201ENST00000368908 LRP1Q07954 4544 aaKnown RBP5.61□□□□□ -1.51
LYSMD1-201ENST00000368908 MYCBP2O75592 4640 aa5.59□□□□□ -1.51
LYSMD1-201ENST00000368908 PKHD1L1Q86WI1 4243 aa5.57□□□□□ -1.52
LYSMD1-201ENST00000368908 P0C880 135 aa5.57□□□□□ -1.52
LYSMD1-201ENST00000368908 HERC2O95714 4834 aa5.57□□□□□ -1.52
LYSMD1-201ENST00000368908 KRTAP17-1Q9BYP8 105 aa5.56□□□□□ -1.52
LYSMD1-201ENST00000368908 SMR3BP02814 79 aaPredicted RBP5.55□□□□□ -1.52
LYSMD1-201ENST00000368908 RPL37P61927 97 aaKnown RBP5.54□□□□□ -1.52
LYSMD1-201ENST00000368908 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
LYSMD1-201ENST00000368908 FLG2Q5D862 2391 aaPredicted RBP5.54□□□□□ -1.52
LYSMD1-201ENST00000368908 C9orf92A6NGG3 77 aa5.53□□□□□ -1.52
LYSMD1-201ENST00000368908 Q5VSD8 79 aa5.53□□□□□ -1.52
LYSMD1-201ENST00000368908 KRTAP10-4P60372 401 aaPredicted RBP5.5□□□□□ -1.53
LYSMD1-201ENST00000368908 ABCA13Q86UQ4 5058 aa5.48□□□□□ -1.53
LYSMD1-201ENST00000368908 KRTAP10-6P60371 365 aaPredicted RBP5.48□□□□□ -1.53
LYSMD1-201ENST00000368908 TPRXLQ17RH7 258 aa5.47□□□□□ -1.53
LYSMD1-201ENST00000368908 KRTAP4-5Q9BYR2 181 aa5.46□□□□□ -1.54
LYSMD1-201ENST00000368908 KRTAP13-4Q3LI77 160 aa5.44□□□□□ -1.54
LYSMD1-201ENST00000368908 SPINT4Q6UDR6 99 aa5.44□□□□□ -1.54
LYSMD1-201ENST00000368908 TNXBP22105 4242 aa5.44□□□□□ -1.54
LYSMD1-201ENST00000368908 FAT3Q8TDW7 4589 aa5.44□□□□□ -1.54
LYSMD1-201ENST00000368908 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.55
LYSMD1-201ENST00000368908 PCLOQ9Y6V0 5065 aa5.38□□□□□ -1.55
LYSMD1-201ENST00000368908 A0A0D9SG42 100 aa5.38□□□□□ -1.55
LYSMD1-201ENST00000368908 LCE2CQ5TA81 110 aa5.36□□□□□ -1.55
LYSMD1-201ENST00000368908 S4R3F8 94 aa5.35□□□□□ -1.55
LYSMD1-201ENST00000368908 DMBT1Q9UGM3 2413 aaPredicted RBP5.35□□□□□ -1.55
LYSMD1-201ENST00000368908 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.56
LYSMD1-201ENST00000368908 LCE2BO14633 110 aa5.33□□□□□ -1.56
LYSMD1-201ENST00000368908 NDUFAF8A1L188 74 aa5.31□□□□□ -1.56
LYSMD1-201ENST00000368908 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
LYSMD1-201ENST00000368908 KRTAP12-2P59991 146 aa5.29□□□□□ -1.56
LYSMD1-201ENST00000368908 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
LYSMD1-201ENST00000368908 KRTAP10-8P60410 259 aa5.28□□□□□ -1.56
LYSMD1-201ENST00000368908 XP32Q5T750 250 aa5.27□□□□□ -1.57
LYSMD1-201ENST00000368908 HERC1Q15751 4861 aa5.27□□□□□ -1.57
LYSMD1-201ENST00000368908 KRTAP12-1P59990 96 aa5.26□□□□□ -1.57
LYSMD1-201ENST00000368908 LPAP08519 4548 aa5.24□□□□□ -1.57
LYSMD1-201ENST00000368908 M0QZ58 72 aa5.2□□□□□ -1.58
LYSMD1-201ENST00000368908 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
LYSMD1-201ENST00000368908 LRP2P98164 4655 aa5.17□□□□□ -1.58
LYSMD1-201ENST00000368908 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
LYSMD1-201ENST00000368908 MUC2Q02817 5179 aa5.06□□□□□ -1.6
LYSMD1-201ENST00000368908 HMCN2Q8NDA2 5059 aa5.02□□□□□ -1.61
LYSMD1-201ENST00000368908 LORP23490 312 aaPredicted RBP5.01□□□□□ -1.61
LYSMD1-201ENST00000368908 PLAC4Q8WY50 150 aa5.01□□□□□ -1.61
LYSMD1-201ENST00000368908 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
LYSMD1-201ENST00000368908 UBR4Q5T4S7 5183 aa4.98□□□□□ -1.61
LYSMD1-201ENST00000368908 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
LYSMD1-201ENST00000368908 R4GN34 69 aa4.95□□□□□ -1.62
LYSMD1-201ENST00000368908 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
LYSMD1-201ENST00000368908 MUC17Q685J3 4493 aa4.87□□□□□ -1.63
LYSMD1-201ENST00000368908 FAT4Q6V0I7 4981 aa4.83□□□□□ -1.64
LYSMD1-201ENST00000368908 KRTAP4-1Q9BYQ7 146 aa4.75□□□□□ -1.65
LYSMD1-201ENST00000368908 CAMK2N1Q7Z7J9 78 aa4.73□□□□□ -1.65
LYSMD1-201ENST00000368908 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
LYSMD1-201ENST00000368908 FLGP20930 4061 aaPredicted RBP4.63□□□□□ -1.67
LYSMD1-201ENST00000368908 TNP1P09430 55 aa4.63□□□□□ -1.67
LYSMD1-201ENST00000368908 KRTAP19-2Q3LHN2 52 aa4.62□□□□□ -1.67
LYSMD1-201ENST00000368908 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
LYSMD1-201ENST00000368908 MT1HP80294 61 aa4.46□□□□□ -1.7
LYSMD1-201ENST00000368908 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
LYSMD1-201ENST00000368908 M0R2T5 61 aa4.37□□□□□ -1.71
LYSMD1-201ENST00000368908 INE1O15225 51 aa4.37□□□□□ -1.71
LYSMD1-201ENST00000368908 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
LYSMD1-201ENST00000368908 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
LYSMD1-201ENST00000368908 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
LYSMD1-201ENST00000368908 KRTAP19-1Q8IUB9 90 aa4.28□□□□□ -1.72
LYSMD1-201ENST00000368908 USH2AO75445 5202 aa4.27□□□□□ -1.73
LYSMD1-201ENST00000368908 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
LYSMD1-201ENST00000368908 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
LYSMD1-201ENST00000368908 FSIP2Q5CZC0 6907 aa4.24□□□□□ -1.73
LYSMD1-201ENST00000368908 MT2AP02795 61 aa4.21□□□□□ -1.73
LYSMD1-201ENST00000368908 MT1FP04733 61 aa4.17□□□□□ -1.74
LYSMD1-201ENST00000368908 KRTAP10-10P60014 251 aa4.15□□□□□ -1.74
LYSMD1-201ENST00000368908 KRTAP19-8Q3LI54 63 aa4.13□□□□□ -1.75
LYSMD1-201ENST00000368908 KRTAP9-3Q9BYQ3 159 aa4.12□□□□□ -1.75
LYSMD1-201ENST00000368908 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
LYSMD1-201ENST00000368908 KRTAP10-12P60413 245 aa4.09□□□□□ -1.75
LYSMD1-201ENST00000368908 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
LYSMD1-201ENST00000368908 MT1XP80297 61 aa4.06□□□□□ -1.76
LYSMD1-201ENST00000368908 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
LYSMD1-201ENST00000368908 MT1BP07438 61 aa4.02□□□□□ -1.77
LYSMD1-201ENST00000368908 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
LYSMD1-201ENST00000368908 KMT2DO14686 5537 aa3.97□□□□□ -1.77
LYSMD1-201ENST00000368908 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
LYSMD1-201ENST00000368908 KRTAP19-6Q3LI70 58 aa3.9□□□□□ -1.78
LYSMD1-201ENST00000368908 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
LYSMD1-201ENST00000368908 KRTAP9-7A8MTY7 169 aa3.86□□□□□ -1.79
LYSMD1-201ENST00000368908 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
LYSMD1-201ENST00000368908 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
LYSMD1-201ENST00000368908 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.8□□□□□ -1.8
LYSMD1-201ENST00000368908 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
LYSMD1-201ENST00000368908 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
LYSMD1-201ENST00000368908 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
LYSMD1-201ENST00000368908 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms