RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 KRTAP3-1Q9BYR8 98 aa7.25□□□□□ -1.25
SHC1-202ENST00000368445 MIR22HGQ0VDD5 57 aa7.25□□□□□ -1.25
SHC1-202ENST00000368445 TNXBP22105 4242 aa7.19□□□□□ -1.26
SHC1-202ENST00000368445 A0A1B0GU33 70 aa7.12□□□□□ -1.27
SHC1-202ENST00000368445 S4R3F8 94 aa7.1□□□□□ -1.27
SHC1-202ENST00000368445 KTN1-AS1Q86SY8 53 aa7.09□□□□□ -1.27
SHC1-202ENST00000368445 SPATA8Q6RVD6 105 aa7.08□□□□□ -1.28
SHC1-202ENST00000368445 LRP2P98164 4655 aa7.08□□□□□ -1.28
SHC1-202ENST00000368445 TPRXLQ17RH7 258 aa7.06□□□□□ -1.28
SHC1-202ENST00000368445 A0A0D9SG42 100 aa7.02□□□□□ -1.29
SHC1-202ENST00000368445 A6NN06 94 aa7.02□□□□□ -1.29
SHC1-202ENST00000368445 LPAP08519 4548 aa7.02□□□□□ -1.29
SHC1-202ENST00000368445 H1FX-AS1Q4G0G2 97 aa7.02□□□□□ -1.29
SHC1-202ENST00000368445 A0A0A0MQY5 61 aa7□□□□□ -1.29
SHC1-202ENST00000368445 ABCA13Q86UQ4 5058 aa7□□□□□ -1.29
SHC1-202ENST00000368445 HERC2O95714 4834 aa6.97□□□□□ -1.29
SHC1-202ENST00000368445 H0YAA0 97 aa6.97□□□□□ -1.29
SHC1-202ENST00000368445 SEC61BP60468 96 aaKnown RBP6.97□□□□□ -1.29
SHC1-202ENST00000368445 PRAC1Q96KF2 57 aa6.96□□□□□ -1.3
SHC1-202ENST00000368445 K7ERS5 55 aa6.95□□□□□ -1.3
SHC1-202ENST00000368445 CSAG1Q6PB30 78 aa6.94□□□□□ -1.3
SHC1-202ENST00000368445 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
SHC1-202ENST00000368445 ADM2Q7Z4H4 148 aa6.92□□□□□ -1.3
SHC1-202ENST00000368445 P0C880 135 aa6.88□□□□□ -1.31
SHC1-202ENST00000368445 LINC01554Q52M75 96 aa6.84□□□□□ -1.31
SHC1-202ENST00000368445 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
SHC1-202ENST00000368445 SPINT4Q6UDR6 99 aa6.81□□□□□ -1.32
SHC1-202ENST00000368445 CRIPTQ9P021 101 aa6.79□□□□□ -1.32
SHC1-202ENST00000368445 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
SHC1-202ENST00000368445 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
SHC1-202ENST00000368445 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
SHC1-202ENST00000368445 BIRC6Q9NR09 4857 aa6.73□□□□□ -1.33
SHC1-202ENST00000368445 MUC2Q02817 5179 aa6.71□□□□□ -1.34
SHC1-202ENST00000368445 R4GN34 69 aa6.7□□□□□ -1.34
SHC1-202ENST00000368445 M0QZ58 72 aa6.7□□□□□ -1.34
SHC1-202ENST00000368445 HERC1Q15751 4861 aa6.68□□□□□ -1.34
SHC1-202ENST00000368445 PCLOQ9Y6V0 5065 aa6.59□□□□□ -1.35
SHC1-202ENST00000368445 ROMO1P60602 79 aa6.58□□□□□ -1.36
SHC1-202ENST00000368445 KRTAP12-2P59991 146 aa6.57□□□□□ -1.36
SHC1-202ENST00000368445 M0R2T5 61 aa6.55□□□□□ -1.36
SHC1-202ENST00000368445 LORP23490 312 aaPredicted RBP6.49□□□□□ -1.37
SHC1-202ENST00000368445 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
SHC1-202ENST00000368445 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
SHC1-202ENST00000368445 MUC17Q685J3 4493 aa6.46□□□□□ -1.38
SHC1-202ENST00000368445 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
SHC1-202ENST00000368445 RNF213Q63HN8 5207 aa6.42□□□□□ -1.38
SHC1-202ENST00000368445 CAMK2N1Q7Z7J9 78 aa6.41□□□□□ -1.38
SHC1-202ENST00000368445 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
SHC1-202ENST00000368445 HMCN2Q8NDA2 5059 aa6.37□□□□□ -1.39
SHC1-202ENST00000368445 KRTAP19-2Q3LHN2 52 aa6.34□□□□□ -1.39
SHC1-202ENST00000368445 UBR4Q5T4S7 5183 aa6.32□□□□□ -1.4
SHC1-202ENST00000368445 FLGP20930 4061 aaPredicted RBP6.27□□□□□ -1.41
SHC1-202ENST00000368445 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
SHC1-202ENST00000368445 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
SHC1-202ENST00000368445 NDUFAF8A1L188 74 aa6.16□□□□□ -1.42
SHC1-202ENST00000368445 PLAC4Q8WY50 150 aa6.13□□□□□ -1.43
SHC1-202ENST00000368445 MT1HP80294 61 aa6.12□□□□□ -1.43
SHC1-202ENST00000368445 TNP1P09430 55 aa5.99□□□□□ -1.45
SHC1-202ENST00000368445 MT1FP04733 61 aa5.98□□□□□ -1.45
SHC1-202ENST00000368445 MT2AP02795 61 aa5.98□□□□□ -1.45
SHC1-202ENST00000368445 LUZP6Q538Z0 58 aa5.97□□□□□ -1.45
SHC1-202ENST00000368445 KRTAP19-1Q8IUB9 90 aa5.93□□□□□ -1.46
SHC1-202ENST00000368445 SPRR2GQ9BYE4 73 aa5.9□□□□□ -1.46
SHC1-202ENST00000368445 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
SHC1-202ENST00000368445 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
SHC1-202ENST00000368445 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
SHC1-202ENST00000368445 MT1BP07438 61 aa5.65□□□□□ -1.5
SHC1-202ENST00000368445 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
SHC1-202ENST00000368445 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
SHC1-202ENST00000368445 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
SHC1-202ENST00000368445 USH2AO75445 5202 aa5.63□□□□□ -1.51
SHC1-202ENST00000368445 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
SHC1-202ENST00000368445 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
SHC1-202ENST00000368445 MT1XP80297 61 aa5.57□□□□□ -1.52
SHC1-202ENST00000368445 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
SHC1-202ENST00000368445 LCE2BO14633 110 aa5.52□□□□□ -1.53
SHC1-202ENST00000368445 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
SHC1-202ENST00000368445 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
SHC1-202ENST00000368445 LCE2AQ5TA79 106 aaPredicted RBP5.49□□□□□ -1.53
SHC1-202ENST00000368445 KRTAP10-7P60409 375 aaPredicted RBP5.48□□□□□ -1.53
SHC1-202ENST00000368445 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
SHC1-202ENST00000368445 KMT2DO14686 5537 aa5.38□□□□□ -1.55
SHC1-202ENST00000368445 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.55
SHC1-202ENST00000368445 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
SHC1-202ENST00000368445 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
SHC1-202ENST00000368445 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
SHC1-202ENST00000368445 SSPOA2VEC9 5147 aa5.12□□□□□ -1.59
SHC1-202ENST00000368445 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
SHC1-202ENST00000368445 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
SHC1-202ENST00000368445 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
SHC1-202ENST00000368445 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
SHC1-202ENST00000368445 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
SHC1-202ENST00000368445 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
SHC1-202ENST00000368445 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
SHC1-202ENST00000368445 DSTQ03001 7570 aaKnown RBP4.84□□□□□ -1.63
SHC1-202ENST00000368445 MT1EP04732 61 aa4.84□□□□□ -1.63
SHC1-202ENST00000368445 MT1LQ93083 61 aa4.81□□□□□ -1.64
SHC1-202ENST00000368445 CRCT1Q9UGL9 99 aa4.79□□□□□ -1.64
SHC1-202ENST00000368445 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
SHC1-202ENST00000368445 LCE2DQ5TA82 110 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms