RNA–Protein interactions for RNA: ENST00000368408.3

EFNA3-201, Transcript of ephrin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3-201ENST00000368408 XP32Q5T750 250 aa13.88□□□□□ -0.19
EFNA3-201ENST00000368408 SPINK7P58062 85 aa13.87□□□□□ -0.19
EFNA3-201ENST00000368408 J3QL48 77 aa13.85□□□□□ -0.19
EFNA3-201ENST00000368408 HERC1Q15751 4861 aa13.78□□□□□ -0.2
EFNA3-201ENST00000368408 TPRXLQ17RH7 258 aa13.75□□□□□ -0.21
EFNA3-201ENST00000368408 KRTAP3-1Q9BYR8 98 aa13.67□□□□□ -0.22
EFNA3-201ENST00000368408 COX6B2Q6YFQ2 88 aa13.62□□□□□ -0.23
EFNA3-201ENST00000368408 LINC01554Q52M75 96 aa13.61□□□□□ -0.23
EFNA3-201ENST00000368408 H3BS24 57 aa13.55□□□□□ -0.24
EFNA3-201ENST00000368408 A0A1B0GU69 56 aa13.38□□□□□ -0.27
EFNA3-201ENST00000368408 LRP2P98164 4655 aa13.38□□□□□ -0.27
EFNA3-201ENST00000368408 PRAC1Q96KF2 57 aa13.37□□□□□ -0.27
EFNA3-201ENST00000368408 HMCN2Q8NDA2 5059 aa13.37□□□□□ -0.27
EFNA3-201ENST00000368408 SPATA8Q6RVD6 105 aa13.33□□□□□ -0.28
EFNA3-201ENST00000368408 LPAP08519 4548 aa13.33□□□□□ -0.28
EFNA3-201ENST00000368408 SEC61BP60468 96 aaKnown RBP13.23□□□□□ -0.29
EFNA3-201ENST00000368408 ADM2Q7Z4H4 148 aa13.2□□□□□ -0.3
EFNA3-201ENST00000368408 H1FX-AS1Q4G0G2 97 aa13.16□□□□□ -0.3
EFNA3-201ENST00000368408 KRTAP3-3Q9BYR6 98 aa13.16□□□□□ -0.3
EFNA3-201ENST00000368408 S4R3F8 94 aa13.12□□□□□ -0.31
EFNA3-201ENST00000368408 MUC17Q685J3 4493 aa13.09□□□□□ -0.31
EFNA3-201ENST00000368408 UQCR11O14957 56 aa13.08□□□□□ -0.32
EFNA3-201ENST00000368408 MIR22HGQ0VDD5 57 aa13.06□□□□□ -0.32
EFNA3-201ENST00000368408 CSAG1Q6PB30 78 aa12.98□□□□□ -0.33
EFNA3-201ENST00000368408 UBR4Q5T4S7 5183 aa12.95□□□□□ -0.34
EFNA3-201ENST00000368408 KRTAP4-1Q9BYQ7 146 aa12.94□□□□□ -0.34
EFNA3-201ENST00000368408 A0A1B0GU33 70 aa12.89□□□□□ -0.35
EFNA3-201ENST00000368408 KRTAP10-6P60371 365 aaPredicted RBP12.82□□□□□ -0.36
EFNA3-201ENST00000368408 KRTAP3-2Q9BYR7 98 aa12.81□□□□□ -0.36
EFNA3-201ENST00000368408 H0YAA0 97 aa12.76□□□□□ -0.37
EFNA3-201ENST00000368408 KRTAP19-2Q3LHN2 52 aa12.74□□□□□ -0.37
EFNA3-201ENST00000368408 ROMO1P60602 79 aa12.71□□□□□ -0.38
EFNA3-201ENST00000368408 KRTAP25-1Q3LHN0 102 aa12.69□□□□□ -0.38
EFNA3-201ENST00000368408 RNF213Q63HN8 5207 aa12.64□□□□□ -0.39
EFNA3-201ENST00000368408 P0C880 135 aa12.6□□□□□ -0.39
EFNA3-201ENST00000368408 MUC2Q02817 5179 aa12.52□□□□□ -0.41
EFNA3-201ENST00000368408 KRTAP13-4Q3LI77 160 aa12.5□□□□□ -0.41
EFNA3-201ENST00000368408 FLGP20930 4061 aaPredicted RBP12.42□□□□□ -0.42
EFNA3-201ENST00000368408 M0QZ58 72 aa12.35□□□□□ -0.43
EFNA3-201ENST00000368408 K7ERS5 55 aa12.28□□□□□ -0.44
EFNA3-201ENST00000368408 LCE2CQ5TA81 110 aa12.24□□□□□ -0.45
EFNA3-201ENST00000368408 A0A0D9SG42 100 aa12.23□□□□□ -0.45
EFNA3-201ENST00000368408 R4GN34 69 aa12.1□□□□□ -0.47
EFNA3-201ENST00000368408 FAT4Q6V0I7 4981 aa12.09□□□□□ -0.47
EFNA3-201ENST00000368408 LORP23490 312 aaPredicted RBP12.06□□□□□ -0.48
EFNA3-201ENST00000368408 KRTAP12-1P59990 96 aa12.05□□□□□ -0.48
EFNA3-201ENST00000368408 KRTAP12-2P59991 146 aa12.02□□□□□ -0.49
EFNA3-201ENST00000368408 MT1HP80294 61 aa11.92□□□□□ -0.5
EFNA3-201ENST00000368408 CRIPTQ9P021 101 aa11.92□□□□□ -0.5
EFNA3-201ENST00000368408 SPINT4Q6UDR6 99 aa11.91□□□□□ -0.5
EFNA3-201ENST00000368408 LCE2AQ5TA79 106 aaPredicted RBP11.87□□□□□ -0.51
EFNA3-201ENST00000368408 KRTAP15-1Q3LI76 137 aa11.82□□□□□ -0.52
EFNA3-201ENST00000368408 M0R2T5 61 aa11.76□□□□□ -0.53
EFNA3-201ENST00000368408 NDUFAF8A1L188 74 aa11.68□□□□□ -0.54
EFNA3-201ENST00000368408 A0A0A0MQY5 61 aa11.64□□□□□ -0.55
EFNA3-201ENST00000368408 SPRR2GQ9BYE4 73 aa11.57□□□□□ -0.56
EFNA3-201ENST00000368408 KRTAP9-8Q9BYQ0 159 aa11.57□□□□□ -0.56
EFNA3-201ENST00000368408 MT2AP02795 61 aa11.56□□□□□ -0.56
EFNA3-201ENST00000368408 MT1FP04733 61 aa11.5□□□□□ -0.57
EFNA3-201ENST00000368408 KRTAP19-1Q8IUB9 90 aa11.49□□□□□ -0.57
EFNA3-201ENST00000368408 KRTAP10-10P60014 251 aa11.44□□□□□ -0.58
EFNA3-201ENST00000368408 C10orf95Q9H7T3 257 aa11.39□□□□□ -0.59
EFNA3-201ENST00000368408 CAMK2N1Q7Z7J9 78 aa11.36□□□□□ -0.59
EFNA3-201ENST00000368408 KRTAP19-8Q3LI54 63 aa11.22□□□□□ -0.61
EFNA3-201ENST00000368408 PLAC4Q8WY50 150 aa11.21□□□□□ -0.61
EFNA3-201ENST00000368408 KRTAP9-2Q9BYQ4 174 aa11.17□□□□□ -0.62
EFNA3-201ENST00000368408 LUZP6Q538Z0 58 aa11.16□□□□□ -0.62
EFNA3-201ENST00000368408 KRTAP9-3Q9BYQ3 159 aa11.15□□□□□ -0.62
EFNA3-201ENST00000368408 LCE2DQ5TA82 110 aaPredicted RBP11.08□□□□□ -0.64
EFNA3-201ENST00000368408 MT1BP07438 61 aa11.01□□□□□ -0.65
EFNA3-201ENST00000368408 TNP1P09430 55 aa10.93□□□□□ -0.66
EFNA3-201ENST00000368408 PP632Q6XCG6 107 aa10.88□□□□□ -0.67
EFNA3-201ENST00000368408 FSIP2Q5CZC0 6907 aa10.83□□□□□ -0.68
EFNA3-201ENST00000368408 KRTAP23-1A1A580 65 aa10.82□□□□□ -0.68
EFNA3-201ENST00000368408 LCE2BO14633 110 aa10.75□□□□□ -0.69
EFNA3-201ENST00000368408 MT1XP80297 61 aa10.74□□□□□ -0.69
EFNA3-201ENST00000368408 KRTAP10-5P60370 271 aa10.73□□□□□ -0.69
EFNA3-201ENST00000368408 KRTAP9-6A0A140TA67 174 aa10.62□□□□□ -0.71
EFNA3-201ENST00000368408 CRCT1Q9UGL9 99 aa10.62□□□□□ -0.71
EFNA3-201ENST00000368408 USH2AO75445 5202 aa10.59□□□□□ -0.71
EFNA3-201ENST00000368408 PRO2289Q9P1D8 64 aa10.53□□□□□ -0.72
EFNA3-201ENST00000368408 SSPOA2VEC9 5147 aa10.43□□□□□ -0.74
EFNA3-201ENST00000368408 LCE3AQ5TA76 89 aa10.39□□□□□ -0.75
EFNA3-201ENST00000368408 KRTAP10-7P60409 375 aaPredicted RBP10.31□□□□□ -0.76
EFNA3-201ENST00000368408 KRTAP10-12P60413 245 aa10.29□□□□□ -0.76
EFNA3-201ENST00000368408 KRTAP8-1Q8IUC2 63 aa10.26□□□□□ -0.77
EFNA3-201ENST00000368408 KRTAP19-6Q3LI70 58 aa10.16□□□□□ -0.78
EFNA3-201ENST00000368408 FCGBPQ9Y6R7 5405 aaPredicted RBP10.12□□□□□ -0.79
EFNA3-201ENST00000368408 SPRR5A0A1B0GTR4 108 aa10.1□□□□□ -0.79
EFNA3-201ENST00000368408 KRTAP12-3P60328 96 aa9.98□□□□□ -0.81
EFNA3-201ENST00000368408 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.87□□□□□ -0.83
EFNA3-201ENST00000368408 INE1O15225 51 aa9.79□□□□□ -0.84
EFNA3-201ENST00000368408 KRTAP19-5Q3LI72 72 aa9.78□□□□□ -0.84
EFNA3-201ENST00000368408 MACF1Q9UPN3 7388 aaKnown RBP9.77□□□□□ -0.84
EFNA3-201ENST00000368408 KRTAP4-8A0A0G2JLE6 195 aa9.77□□□□□ -0.85
EFNA3-201ENST00000368408 KRTAP4-8Q9BYQ9 185 aa9.77□□□□□ -0.85
EFNA3-201ENST00000368408 KMT2DO14686 5537 aa9.62□□□□□ -0.87
EFNA3-201ENST00000368408 KRTAP9-7A8MTY7 169 aa9.61□□□□□ -0.87
EFNA3-201ENST00000368408 SYNE2Q8WXH0 6885 aaKnown RBP9.61□□□□□ -0.87
EFNA3-201ENST00000368408 KRTAP19-7Q3SYF9 63 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms