RNA–Protein interactions for RNA: ENST00000368262.7

CCT3-206, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 2,048 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-206ENST00000368262 KRTAP13-4Q3LI77 160 aa7.25□□□□□ -1.25
CCT3-206ENST00000368262 PKHD1P08F94 4074 aa7.24□□□□□ -1.25
CCT3-206ENST00000368262 TPRXLQ17RH7 258 aa7.23□□□□□ -1.25
CCT3-206ENST00000368262 APOBP04114 4563 aaKnown RBP7.23□□□□□ -1.25
CCT3-206ENST00000368262 BIRC6Q9NR09 4857 aa7.21□□□□□ -1.25
CCT3-206ENST00000368262 SMR3BP02814 79 aaPredicted RBP7.19□□□□□ -1.26
CCT3-206ENST00000368262 A0A0D9SG42 100 aa7.14□□□□□ -1.27
CCT3-206ENST00000368262 DYNC1H1Q14204 4646 aaKnown RBP7.13□□□□□ -1.27
CCT3-206ENST00000368262 S4R3F8 94 aa7.13□□□□□ -1.27
CCT3-206ENST00000368262 SPINT4Q6UDR6 99 aa7.1□□□□□ -1.27
CCT3-206ENST00000368262 A0A1B0GVY2 172 aa7.1□□□□□ -1.27
CCT3-206ENST00000368262 EPPK1P58107 5090 aaKnown RBP7.08□□□□□ -1.28
CCT3-206ENST00000368262 KRTAP15-1Q3LI76 137 aa7.08□□□□□ -1.28
CCT3-206ENST00000368262 KRTAP10-8P60410 259 aa7.06□□□□□ -1.28
CCT3-206ENST00000368262 C10orf95Q9H7T3 257 aa7.06□□□□□ -1.28
CCT3-206ENST00000368262 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
CCT3-206ENST00000368262 FAT3Q8TDW7 4589 aa7.02□□□□□ -1.29
CCT3-206ENST00000368262 TNXBP22105 4242 aa7.01□□□□□ -1.29
CCT3-206ENST00000368262 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
CCT3-206ENST00000368262 DMBT1Q9UGM3 2413 aaPredicted RBP7□□□□□ -1.29
CCT3-206ENST00000368262 XP32Q5T750 250 aa7□□□□□ -1.29
CCT3-206ENST00000368262 LRP1Q07954 4544 aaKnown RBP7□□□□□ -1.29
CCT3-206ENST00000368262 FAT1Q14517 4588 aa6.99□□□□□ -1.29
CCT3-206ENST00000368262 HSPG2P98160 4391 aa6.92□□□□□ -1.3
CCT3-206ENST00000368262 NDUFAF8A1L188 74 aa6.91□□□□□ -1.3
CCT3-206ENST00000368262 M0QZ58 72 aa6.91□□□□□ -1.3
CCT3-206ENST00000368262 PCLOQ9Y6V0 5065 aa6.88□□□□□ -1.31
CCT3-206ENST00000368262 RYR1P21817 5038 aa6.86□□□□□ -1.31
CCT3-206ENST00000368262 RYR2Q92736 4967 aa6.86□□□□□ -1.31
CCT3-206ENST00000368262 HERC2O95714 4834 aa6.78□□□□□ -1.32
CCT3-206ENST00000368262 Q5VSD8 79 aa6.74□□□□□ -1.33
CCT3-206ENST00000368262 MT1HL1P0DM35 61 aa6.67□□□□□ -1.34
CCT3-206ENST00000368262 MYCBP2O75592 4640 aa6.6□□□□□ -1.35
CCT3-206ENST00000368262 R4GN34 69 aa6.59□□□□□ -1.36
CCT3-206ENST00000368262 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
CCT3-206ENST00000368262 UBR4Q5T4S7 5183 aa6.5□□□□□ -1.37
CCT3-206ENST00000368262 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
CCT3-206ENST00000368262 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
CCT3-206ENST00000368262 LRP2P98164 4655 aa6.45□□□□□ -1.38
CCT3-206ENST00000368262 ABCA13Q86UQ4 5058 aa6.44□□□□□ -1.38
CCT3-206ENST00000368262 LPAP08519 4548 aa6.44□□□□□ -1.38
CCT3-206ENST00000368262 KIAA1109Q2LD37 5005 aa6.43□□□□□ -1.38
CCT3-206ENST00000368262 SEC61BP60468 96 aaKnown RBP6.35□□□□□ -1.39
CCT3-206ENST00000368262 HERC1Q15751 4861 aa6.34□□□□□ -1.39
CCT3-206ENST00000368262 LUZP6Q538Z0 58 aa6.32□□□□□ -1.4
CCT3-206ENST00000368262 MUC17Q685J3 4493 aa6.3□□□□□ -1.4
CCT3-206ENST00000368262 KRTAP19-2Q3LHN2 52 aa6.3□□□□□ -1.4
CCT3-206ENST00000368262 KRTAP4-1Q9BYQ7 146 aa6.28□□□□□ -1.4
CCT3-206ENST00000368262 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
CCT3-206ENST00000368262 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
CCT3-206ENST00000368262 A0A0A0MQY5 61 aa6.23□□□□□ -1.41
CCT3-206ENST00000368262 KRTAP4-5Q9BYR2 181 aa6.21□□□□□ -1.42
CCT3-206ENST00000368262 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
CCT3-206ENST00000368262 TNP1P09430 55 aa6.13□□□□□ -1.43
CCT3-206ENST00000368262 FLGP20930 4061 aaPredicted RBP6.01□□□□□ -1.45
CCT3-206ENST00000368262 J3QL48 77 aa5.89□□□□□ -1.47
CCT3-206ENST00000368262 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
CCT3-206ENST00000368262 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
CCT3-206ENST00000368262 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
CCT3-206ENST00000368262 KRTAP9-2Q9BYQ4 174 aa5.82□□□□□ -1.48
CCT3-206ENST00000368262 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
CCT3-206ENST00000368262 RNF213Q63HN8 5207 aa5.78□□□□□ -1.48
CCT3-206ENST00000368262 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
CCT3-206ENST00000368262 LCE2CQ5TA81 110 aa5.75□□□□□ -1.49
CCT3-206ENST00000368262 LCE2DQ5TA82 110 aaPredicted RBP5.73□□□□□ -1.49
CCT3-206ENST00000368262 PRO2289Q9P1D8 64 aa5.73□□□□□ -1.49
CCT3-206ENST00000368262 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
CCT3-206ENST00000368262 INE1O15225 51 aa5.66□□□□□ -1.5
CCT3-206ENST00000368262 MUC2Q02817 5179 aa5.6□□□□□ -1.51
CCT3-206ENST00000368262 KRTAP19-8Q3LI54 63 aa5.59□□□□□ -1.51
CCT3-206ENST00000368262 FAT4Q6V0I7 4981 aa5.58□□□□□ -1.52
CCT3-206ENST00000368262 MT2AP02795 61 aa5.55□□□□□ -1.52
CCT3-206ENST00000368262 MT1FP04733 61 aa5.55□□□□□ -1.52
CCT3-206ENST00000368262 MT1HP80294 61 aa5.53□□□□□ -1.52
CCT3-206ENST00000368262 KRTAP10-5P60370 271 aa5.5□□□□□ -1.53
CCT3-206ENST00000368262 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
CCT3-206ENST00000368262 MT1XP80297 61 aa5.49□□□□□ -1.53
CCT3-206ENST00000368262 KRTAP10-10P60014 251 aa5.48□□□□□ -1.53
CCT3-206ENST00000368262 M0R2T5 61 aa5.48□□□□□ -1.53
CCT3-206ENST00000368262 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
CCT3-206ENST00000368262 MT1BP07438 61 aa5.47□□□□□ -1.53
CCT3-206ENST00000368262 KRTAP10-12P60413 245 aa5.46□□□□□ -1.54
CCT3-206ENST00000368262 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
CCT3-206ENST00000368262 FSIP2Q5CZC0 6907 aa5.34□□□□□ -1.55
CCT3-206ENST00000368262 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
CCT3-206ENST00000368262 KRTAP9-3Q9BYQ3 159 aa5.24□□□□□ -1.57
CCT3-206ENST00000368262 KRTAP9-7A8MTY7 169 aa5.21□□□□□ -1.58
CCT3-206ENST00000368262 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
CCT3-206ENST00000368262 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
CCT3-206ENST00000368262 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
CCT3-206ENST00000368262 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
CCT3-206ENST00000368262 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
CCT3-206ENST00000368262 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
CCT3-206ENST00000368262 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
CCT3-206ENST00000368262 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.02□□□□□ -1.61
CCT3-206ENST00000368262 LCE2BO14633 110 aa4.96□□□□□ -1.62
CCT3-206ENST00000368262 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
CCT3-206ENST00000368262 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
CCT3-206ENST00000368262 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
CCT3-206ENST00000368262 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms