RNA–Protein interactions for RNA: ENST00000367512.7

EDEM3-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,678 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-202ENST00000367512 KRTAP8-1Q8IUC2 63 aa5.59□□□□□ -1.51
EDEM3-202ENST00000367512 ALMS1Q8TCU4 4167 aa5.56□□□□□ -1.52
EDEM3-202ENST00000367512 FRAS1Q86XX4 4008 aa5.54□□□□□ -1.52
EDEM3-202ENST00000367512 FBN1P35555 2871 aaKnown RBP5.53□□□□□ -1.52
EDEM3-202ENST00000367512 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
EDEM3-202ENST00000367512 DNAH10Q8IVF4 4471 aa5.39□□□□□ -1.55
EDEM3-202ENST00000367512 ANK2Q01484 3957 aa5.33□□□□□ -1.56
EDEM3-202ENST00000367512 KRTAP10-4P60372 401 aaPredicted RBP5.32□□□□□ -1.56
EDEM3-202ENST00000367512 OTOGQ6ZRI0 2925 aa5.31□□□□□ -1.56
EDEM3-202ENST00000367512 DNAH2Q9P225 4427 aa5.3□□□□□ -1.56
EDEM3-202ENST00000367512 DNAH1Q9P2D7 4330 aa5.3□□□□□ -1.56
EDEM3-202ENST00000367512 SPRR2FQ96RM1 72 aa5.29□□□□□ -1.56
EDEM3-202ENST00000367512 DNAH3Q8TD57 4116 aa5.28□□□□□ -1.56
EDEM3-202ENST00000367512 CMYA5Q8N3K9 4069 aa5.26□□□□□ -1.57
EDEM3-202ENST00000367512 DNAH9Q9NYC9 4486 aa5.24□□□□□ -1.57
EDEM3-202ENST00000367512 LYSTQ99698 3801 aa5.2□□□□□ -1.58
EDEM3-202ENST00000367512 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
EDEM3-202ENST00000367512 KMT2AQ03164 3969 aa5.19□□□□□ -1.58
EDEM3-202ENST00000367512 KRTAP19-5Q3LI72 72 aa5.17□□□□□ -1.58
EDEM3-202ENST00000367512 DNAH8Q96JB1 4490 aa5.15□□□□□ -1.59
EDEM3-202ENST00000367512 KRTAP4-1Q9BYQ7 146 aa5.12□□□□□ -1.59
EDEM3-202ENST00000367512 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
EDEM3-202ENST00000367512 MT1HP80294 61 aa5.07□□□□□ -1.6
EDEM3-202ENST00000367512 VPS13BQ7Z7G8 4022 aa5.04□□□□□ -1.6
EDEM3-202ENST00000367512 DNAH7Q8WXX0 4024 aa5.03□□□□□ -1.6
EDEM3-202ENST00000367512 SPRR2EP22531 72 aa5.03□□□□□ -1.6
EDEM3-202ENST00000367512 SPRR2BP35325 72 aa5.03□□□□□ -1.6
EDEM3-202ENST00000367512 SPRR2AP35326 72 aa5.03□□□□□ -1.6
EDEM3-202ENST00000367512 MT2AP02795 61 aa5.02□□□□□ -1.61
EDEM3-202ENST00000367512 DNAH11Q96DT5 4516 aa5.02□□□□□ -1.61
EDEM3-202ENST00000367512 LCE3BQ5TA77 95 aa5□□□□□ -1.61
EDEM3-202ENST00000367512 PRKDCP78527 4128 aaKnown RBP4.98□□□□□ -1.61
EDEM3-202ENST00000367512 FAT2Q9NYQ8 4349 aa4.97□□□□□ -1.61
EDEM3-202ENST00000367512 DNAH17Q9UFH2 4485 aa4.97□□□□□ -1.61
EDEM3-202ENST00000367512 PLECQ15149 4684 aaKnown RBP4.97□□□□□ -1.61
EDEM3-202ENST00000367512 MT1FP04733 61 aa4.94□□□□□ -1.62
EDEM3-202ENST00000367512 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
EDEM3-202ENST00000367512 DNAH6Q9C0G6 4158 aa4.9□□□□□ -1.63
EDEM3-202ENST00000367512 FAT1Q14517 4588 aa4.9□□□□□ -1.63
EDEM3-202ENST00000367512 STARD9Q9P2P6 4700 aa4.88□□□□□ -1.63
EDEM3-202ENST00000367512 DNAH5Q8TE73 4624 aa4.88□□□□□ -1.63
EDEM3-202ENST00000367512 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
EDEM3-202ENST00000367512 VPS13DQ5THJ4 4388 aa4.84□□□□□ -1.64
EDEM3-202ENST00000367512 SPRR2DP22532 72 aa4.83□□□□□ -1.64
EDEM3-202ENST00000367512 MT1GP13640 62 aa4.82□□□□□ -1.64
EDEM3-202ENST00000367512 DYNC2H1Q8NCM8 4307 aaKnown RBP4.78□□□□□ -1.64
EDEM3-202ENST00000367512 HECTD4Q9Y4D8 3996 aa4.75□□□□□ -1.65
EDEM3-202ENST00000367512 LRP1BQ9NZR2 4599 aa4.74□□□□□ -1.65
EDEM3-202ENST00000367512 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
EDEM3-202ENST00000367512 LCE2BO14633 110 aa4.66□□□□□ -1.66
EDEM3-202ENST00000367512 LPAP08519 4548 aa4.64□□□□□ -1.67
EDEM3-202ENST00000367512 SACSQ9NZJ4 4579 aa4.62□□□□□ -1.67
EDEM3-202ENST00000367512 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
EDEM3-202ENST00000367512 APOBP04114 4563 aaKnown RBP4.58□□□□□ -1.68
EDEM3-202ENST00000367512 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
EDEM3-202ENST00000367512 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
EDEM3-202ENST00000367512 PKD1P98161 4303 aa4.55□□□□□ -1.68
EDEM3-202ENST00000367512 MT4P47944 62 aa4.55□□□□□ -1.68
EDEM3-202ENST00000367512 MT1XP80297 61 aa4.54□□□□□ -1.68
EDEM3-202ENST00000367512 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
EDEM3-202ENST00000367512 KRTAP19-1Q8IUB9 90 aa4.51□□□□□ -1.69
EDEM3-202ENST00000367512 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
EDEM3-202ENST00000367512 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
EDEM3-202ENST00000367512 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-202ENST00000367512 DYNC1H1Q14204 4646 aaKnown RBP4.47□□□□□ -1.69
EDEM3-202ENST00000367512 RYR1P21817 5038 aa4.45□□□□□ -1.7
EDEM3-202ENST00000367512 KRTAP17-1Q9BYP8 105 aa4.45□□□□□ -1.7
EDEM3-202ENST00000367512 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
EDEM3-202ENST00000367512 KRTAP19-8Q3LI54 63 aa4.44□□□□□ -1.7
EDEM3-202ENST00000367512 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
EDEM3-202ENST00000367512 FAT3Q8TDW7 4589 aa4.4□□□□□ -1.7
EDEM3-202ENST00000367512 MT1BP07438 61 aa4.39□□□□□ -1.71
EDEM3-202ENST00000367512 TNXBP22105 4242 aa4.38□□□□□ -1.71
EDEM3-202ENST00000367512 PRM1P04553 51 aa4.37□□□□□ -1.71
EDEM3-202ENST00000367512 PKHD1L1Q86WI1 4243 aa4.36□□□□□ -1.71
EDEM3-202ENST00000367512 HSPG2P98160 4391 aa4.35□□□□□ -1.71
EDEM3-202ENST00000367512 LRP1Q07954 4544 aaKnown RBP4.32□□□□□ -1.72
EDEM3-202ENST00000367512 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
EDEM3-202ENST00000367512 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
EDEM3-202ENST00000367512 MYCBP2O75592 4640 aa4.28□□□□□ -1.72
EDEM3-202ENST00000367512 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
EDEM3-202ENST00000367512 FLGP20930 4061 aaPredicted RBP4.25□□□□□ -1.73
EDEM3-202ENST00000367512 DNHD1Q96M86 4753 aa4.24□□□□□ -1.73
EDEM3-202ENST00000367512 KRTAP9-8Q9BYQ0 159 aa4.23□□□□□ -1.73
EDEM3-202ENST00000367512 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
EDEM3-202ENST00000367512 HYDINQ4G0P3 5121 aa4.19□□□□□ -1.74
EDEM3-202ENST00000367512 MT1LQ93083 61 aa4.17□□□□□ -1.74
EDEM3-202ENST00000367512 RYR3Q15413 4870 aa4.15□□□□□ -1.74
EDEM3-202ENST00000367512 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.74
EDEM3-202ENST00000367512 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
EDEM3-202ENST00000367512 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
EDEM3-202ENST00000367512 MT1EP04732 61 aa4.09□□□□□ -1.75
EDEM3-202ENST00000367512 MT3P25713 68 aa4.09□□□□□ -1.76
EDEM3-202ENST00000367512 KRTAP4-9Q9BYQ8 210 aa4.05□□□□□ -1.76
EDEM3-202ENST00000367512 MT1MQ8N339 61 aa4.01□□□□□ -1.77
EDEM3-202ENST00000367512 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
EDEM3-202ENST00000367512 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
EDEM3-202ENST00000367512 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
EDEM3-202ENST00000367512 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
EDEM3-202ENST00000367512 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms