RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 Q6ZSA8 131 aa5.1□□□□□ -1.59
TOP1-201ENST00000361337 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
TOP1-201ENST00000361337 KMT2CQ8NEZ4 4911 aaKnown RBP5.07□□□□□ -1.6
TOP1-201ENST00000361337 RYR2Q92736 4967 aa5.03□□□□□ -1.6
TOP1-201ENST00000361337 KIAA1109Q2LD37 5005 aa5.03□□□□□ -1.6
TOP1-201ENST00000361337 A0A1B0GVY2 172 aa5.02□□□□□ -1.61
TOP1-201ENST00000361337 KRTAP1-4P0C5Y4 121 aa5.02□□□□□ -1.61
TOP1-201ENST00000361337 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
TOP1-201ENST00000361337 H1FX-AS1Q4G0G2 97 aa5.02□□□□□ -1.61
TOP1-201ENST00000361337 H0YAA0 97 aa4.99□□□□□ -1.61
TOP1-201ENST00000361337 C20orf166-AS1Q96NR2 134 aa4.99□□□□□ -1.61
TOP1-201ENST00000361337 RPL37P61927 97 aaKnown RBP4.98□□□□□ -1.61
TOP1-201ENST00000361337 RYR3Q15413 4870 aa4.95□□□□□ -1.62
TOP1-201ENST00000361337 LCE2BO14633 110 aa4.94□□□□□ -1.62
TOP1-201ENST00000361337 P0C880 135 aa4.93□□□□□ -1.62
TOP1-201ENST00000361337 RYR1P21817 5038 aa4.93□□□□□ -1.62
TOP1-201ENST00000361337 KRTAP4-5Q9BYR2 181 aa4.92□□□□□ -1.62
TOP1-201ENST00000361337 MYCBP2O75592 4640 aa4.91□□□□□ -1.62
TOP1-201ENST00000361337 COX6B2Q6YFQ2 88 aa4.91□□□□□ -1.62
TOP1-201ENST00000361337 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
TOP1-201ENST00000361337 LRP1Q07954 4544 aaKnown RBP4.85□□□□□ -1.63
TOP1-201ENST00000361337 EPPK1P58107 5090 aaKnown RBP4.77□□□□□ -1.65
TOP1-201ENST00000361337 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
TOP1-201ENST00000361337 TPRXLQ17RH7 258 aa4.77□□□□□ -1.65
TOP1-201ENST00000361337 KRTAP10-8P60410 259 aa4.75□□□□□ -1.65
TOP1-201ENST00000361337 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
TOP1-201ENST00000361337 KRTAP10-4P60372 401 aaPredicted RBP4.74□□□□□ -1.65
TOP1-201ENST00000361337 S4R3F8 94 aa4.74□□□□□ -1.65
TOP1-201ENST00000361337 CAMK2N1Q7Z7J9 78 aa4.72□□□□□ -1.65
TOP1-201ENST00000361337 M0R2T5 61 aa4.71□□□□□ -1.66
TOP1-201ENST00000361337 XP32Q5T750 250 aa4.71□□□□□ -1.66
TOP1-201ENST00000361337 RPS29P62273 56 aaKnown RBP4.7□□□□□ -1.66
TOP1-201ENST00000361337 KRTAP13-4Q3LI77 160 aa4.69□□□□□ -1.66
TOP1-201ENST00000361337 HERC2O95714 4834 aa4.69□□□□□ -1.66
TOP1-201ENST00000361337 M0QZ58 72 aa4.68□□□□□ -1.66
TOP1-201ENST00000361337 R4GN34 69 aa4.68□□□□□ -1.66
TOP1-201ENST00000361337 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
TOP1-201ENST00000361337 SEC61BP60468 96 aaKnown RBP4.67□□□□□ -1.66
TOP1-201ENST00000361337 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
TOP1-201ENST00000361337 LCE2CQ5TA81 110 aa4.64□□□□□ -1.67
TOP1-201ENST00000361337 PLAC4Q8WY50 150 aa4.63□□□□□ -1.67
TOP1-201ENST00000361337 LPAP08519 4548 aa4.6□□□□□ -1.67
TOP1-201ENST00000361337 LRP2P98164 4655 aa4.6□□□□□ -1.67
TOP1-201ENST00000361337 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
TOP1-201ENST00000361337 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
TOP1-201ENST00000361337 ABCA13Q86UQ4 5058 aa4.54□□□□□ -1.68
TOP1-201ENST00000361337 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
TOP1-201ENST00000361337 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
TOP1-201ENST00000361337 BIRC6Q9NR09 4857 aa4.51□□□□□ -1.69
TOP1-201ENST00000361337 HERC1Q15751 4861 aa4.48□□□□□ -1.69
TOP1-201ENST00000361337 PCLOQ9Y6V0 5065 aa4.45□□□□□ -1.7
TOP1-201ENST00000361337 KRTAP12-1P59990 96 aa4.45□□□□□ -1.7
TOP1-201ENST00000361337 MUC2Q02817 5179 aa4.41□□□□□ -1.7
TOP1-201ENST00000361337 LORP23490 312 aaPredicted RBP4.41□□□□□ -1.7
TOP1-201ENST00000361337 RNF213Q63HN8 5207 aa4.4□□□□□ -1.7
TOP1-201ENST00000361337 UBR4Q5T4S7 5183 aa4.32□□□□□ -1.72
TOP1-201ENST00000361337 KRTAP4-1Q9BYQ7 146 aa4.32□□□□□ -1.72
TOP1-201ENST00000361337 KRTAP10-10P60014 251 aa4.26□□□□□ -1.73
TOP1-201ENST00000361337 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
TOP1-201ENST00000361337 TNP1P09430 55 aa4.24□□□□□ -1.73
TOP1-201ENST00000361337 FSIP2Q5CZC0 6907 aa4.23□□□□□ -1.73
TOP1-201ENST00000361337 KRTAP19-2Q3LHN2 52 aa4.2□□□□□ -1.74
TOP1-201ENST00000361337 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
TOP1-201ENST00000361337 HMCN2Q8NDA2 5059 aa4.09□□□□□ -1.75
TOP1-201ENST00000361337 MT1HP80294 61 aa3.98□□□□□ -1.77
TOP1-201ENST00000361337 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
TOP1-201ENST00000361337 MT1FP04733 61 aa3.87□□□□□ -1.79
TOP1-201ENST00000361337 MT2AP02795 61 aa3.86□□□□□ -1.79
TOP1-201ENST00000361337 USH2AO75445 5202 aa3.84□□□□□ -1.8
TOP1-201ENST00000361337 LOC100996750A0A140TA64 210 aa3.83□□□□□ -1.8
TOP1-201ENST00000361337 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
TOP1-201ENST00000361337 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
TOP1-201ENST00000361337 INE1O15225 51 aa3.8□□□□□ -1.8
TOP1-201ENST00000361337 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
TOP1-201ENST00000361337 KRTAP19-1Q8IUB9 90 aa3.73□□□□□ -1.81
TOP1-201ENST00000361337 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
TOP1-201ENST00000361337 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
TOP1-201ENST00000361337 SPRR2GQ9BYE4 73 aa3.69□□□□□ -1.82
TOP1-201ENST00000361337 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
TOP1-201ENST00000361337 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.6□□□□□ -1.83
TOP1-201ENST00000361337 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
TOP1-201ENST00000361337 KMT2DO14686 5537 aa3.57□□□□□ -1.84
TOP1-201ENST00000361337 KRTAP9-3Q9BYQ3 159 aa3.57□□□□□ -1.84
TOP1-201ENST00000361337 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
TOP1-201ENST00000361337 KRTAP9-2Q9BYQ4 174 aa3.57□□□□□ -1.84
TOP1-201ENST00000361337 KRTAP10-12P60413 245 aa3.57□□□□□ -1.84
TOP1-201ENST00000361337 MT1BP07438 61 aa3.55□□□□□ -1.84
TOP1-201ENST00000361337 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
TOP1-201ENST00000361337 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
TOP1-201ENST00000361337 KRTAP9-6A0A140TA67 174 aa3.54□□□□□ -1.84
TOP1-201ENST00000361337 KRTAP10-5P60370 271 aa3.54□□□□□ -1.84
TOP1-201ENST00000361337 CRCT1Q9UGL9 99 aa3.54□□□□□ -1.84
TOP1-201ENST00000361337 MT1XP80297 61 aa3.53□□□□□ -1.84
TOP1-201ENST00000361337 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
TOP1-201ENST00000361337 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
TOP1-201ENST00000361337 KRTAP4-8A0A0G2JLE6 195 aa3.49□□□□□ -1.85
TOP1-201ENST00000361337 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
TOP1-201ENST00000361337 KRTAP19-8Q3LI54 63 aa3.48□□□□□ -1.85
TOP1-201ENST00000361337 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
TOP1-201ENST00000361337 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms