RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 C9orf92A6NGG3 77 aa10.96□□□□□ -0.66
CBWD3-201ENST00000360171 C20orf166-AS1Q96NR2 134 aa10.95□□□□□ -0.66
CBWD3-201ENST00000360171 A8MUU9 505 aa10.94□□□□□ -0.66
CBWD3-201ENST00000360171 PRAC1Q96KF2 57 aa10.87□□□□□ -0.67
CBWD3-201ENST00000360171 ADM2Q7Z4H4 148 aa10.84□□□□□ -0.67
CBWD3-201ENST00000360171 J3QL48 77 aa10.79□□□□□ -0.68
CBWD3-201ENST00000360171 KRTAP3-1Q9BYR8 98 aa10.77□□□□□ -0.68
CBWD3-201ENST00000360171 H0YAA0 97 aa10.72□□□□□ -0.69
CBWD3-201ENST00000360171 PCLOQ9Y6V0 5065 aa10.69□□□□□ -0.7
CBWD3-201ENST00000360171 XP32Q5T750 250 aa10.69□□□□□ -0.7
CBWD3-201ENST00000360171 LINC01554Q52M75 96 aa10.68□□□□□ -0.7
CBWD3-201ENST00000360171 A0A1B0GU33 70 aa10.66□□□□□ -0.7
CBWD3-201ENST00000360171 TPRXLQ17RH7 258 aa10.64□□□□□ -0.71
CBWD3-201ENST00000360171 H1FX-AS1Q4G0G2 97 aa10.63□□□□□ -0.71
CBWD3-201ENST00000360171 COX6B2Q6YFQ2 88 aa10.63□□□□□ -0.71
CBWD3-201ENST00000360171 RPL37P61927 97 aaKnown RBP10.6□□□□□ -0.71
CBWD3-201ENST00000360171 LPAP08519 4548 aa10.6□□□□□ -0.71
CBWD3-201ENST00000360171 CSAG1Q6PB30 78 aa10.6□□□□□ -0.71
CBWD3-201ENST00000360171 LRP2P98164 4655 aa10.53□□□□□ -0.72
CBWD3-201ENST00000360171 HERC1Q15751 4861 aa10.45□□□□□ -0.74
CBWD3-201ENST00000360171 K7ERS5 55 aa10.4□□□□□ -0.74
CBWD3-201ENST00000360171 KRTAP25-1Q3LHN0 102 aa10.37□□□□□ -0.75
CBWD3-201ENST00000360171 KRTAP3-3Q9BYR6 98 aa10.33□□□□□ -0.76
CBWD3-201ENST00000360171 HMCN2Q8NDA2 5059 aa10.31□□□□□ -0.76
CBWD3-201ENST00000360171 KRTAP10-6P60371 365 aaPredicted RBP10.29□□□□□ -0.76
CBWD3-201ENST00000360171 SEC61BP60468 96 aaKnown RBP10.24□□□□□ -0.77
CBWD3-201ENST00000360171 S4R3F8 94 aa10.22□□□□□ -0.77
CBWD3-201ENST00000360171 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.77
CBWD3-201ENST00000360171 MUC17Q685J3 4493 aa10.18□□□□□ -0.78
CBWD3-201ENST00000360171 ROMO1P60602 79 aa10.16□□□□□ -0.78
CBWD3-201ENST00000360171 KRTAP13-4Q3LI77 160 aa10.15□□□□□ -0.78
CBWD3-201ENST00000360171 KRTAP4-1Q9BYQ7 146 aa10.15□□□□□ -0.78
CBWD3-201ENST00000360171 A0A0D9SG42 100 aa10.02□□□□□ -0.81
CBWD3-201ENST00000360171 P0C880 135 aa10.02□□□□□ -0.81
CBWD3-201ENST00000360171 CRIPTQ9P021 101 aa9.99□□□□□ -0.81
CBWD3-201ENST00000360171 MUC2Q02817 5179 aa9.91□□□□□ -0.82
CBWD3-201ENST00000360171 KRTAP19-2Q3LHN2 52 aa9.87□□□□□ -0.83
CBWD3-201ENST00000360171 UBR4Q5T4S7 5183 aa9.85□□□□□ -0.83
CBWD3-201ENST00000360171 KRTAP12-2P59991 146 aa9.84□□□□□ -0.83
CBWD3-201ENST00000360171 M0QZ58 72 aa9.82□□□□□ -0.84
CBWD3-201ENST00000360171 KRTAP12-1P59990 96 aa9.81□□□□□ -0.84
CBWD3-201ENST00000360171 RNF213Q63HN8 5207 aa9.78□□□□□ -0.84
CBWD3-201ENST00000360171 H3BS24 57 aa9.77□□□□□ -0.85
CBWD3-201ENST00000360171 SPINT4Q6UDR6 99 aa9.7□□□□□ -0.86
CBWD3-201ENST00000360171 C10orf95Q9H7T3 257 aa9.68□□□□□ -0.86
CBWD3-201ENST00000360171 FLGP20930 4061 aaPredicted RBP9.63□□□□□ -0.87
CBWD3-201ENST00000360171 LCE2CQ5TA81 110 aa9.63□□□□□ -0.87
CBWD3-201ENST00000360171 LCE2DQ5TA82 110 aaPredicted RBP9.6□□□□□ -0.87
CBWD3-201ENST00000360171 FAT4Q6V0I7 4981 aa9.51□□□□□ -0.89
CBWD3-201ENST00000360171 KRTAP15-1Q3LI76 137 aa9.48□□□□□ -0.89
CBWD3-201ENST00000360171 R4GN34 69 aa9.47□□□□□ -0.89
CBWD3-201ENST00000360171 MT1HP80294 61 aa9.41□□□□□ -0.9
CBWD3-201ENST00000360171 M0R2T5 61 aa9.28□□□□□ -0.92
CBWD3-201ENST00000360171 LORP23490 312 aaPredicted RBP9.26□□□□□ -0.93
CBWD3-201ENST00000360171 NDUFAF8A1L188 74 aa9.19□□□□□ -0.94
CBWD3-201ENST00000360171 KRTAP9-8Q9BYQ0 159 aa9.07□□□□□ -0.96
CBWD3-201ENST00000360171 MT2AP02795 61 aa9.05□□□□□ -0.96
CBWD3-201ENST00000360171 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
CBWD3-201ENST00000360171 LCE2AQ5TA79 106 aaPredicted RBP9.04□□□□□ -0.96
CBWD3-201ENST00000360171 MT1FP04733 61 aa9.01□□□□□ -0.97
CBWD3-201ENST00000360171 PLAC4Q8WY50 150 aa9.01□□□□□ -0.97
CBWD3-201ENST00000360171 CAMK2N1Q7Z7J9 78 aa8.98□□□□□ -0.97
CBWD3-201ENST00000360171 KRTAP10-10P60014 251 aa8.94□□□□□ -0.98
CBWD3-201ENST00000360171 KRTAP19-1Q8IUB9 90 aa8.85□□□□□ -0.99
CBWD3-201ENST00000360171 SPRR2GQ9BYE4 73 aa8.83□□□□□ -1
CBWD3-201ENST00000360171 KRTAP23-1A1A580 65 aa8.79□□□□□ -1
CBWD3-201ENST00000360171 KRTAP9-3Q9BYQ3 159 aa8.73□□□□□ -1.01
CBWD3-201ENST00000360171 TNP1P09430 55 aa8.73□□□□□ -1.01
CBWD3-201ENST00000360171 LUZP6Q538Z0 58 aa8.63□□□□□ -1.03
CBWD3-201ENST00000360171 KRTAP19-8Q3LI54 63 aa8.61□□□□□ -1.03
CBWD3-201ENST00000360171 MT1BP07438 61 aa8.54□□□□□ -1.04
CBWD3-201ENST00000360171 LCE2BO14633 110 aa8.52□□□□□ -1.05
CBWD3-201ENST00000360171 SPRR5A0A1B0GTR4 108 aa8.48□□□□□ -1.05
CBWD3-201ENST00000360171 USH2AO75445 5202 aa8.31□□□□□ -1.08
CBWD3-201ENST00000360171 A0A0A0MQY5 61 aa8.28□□□□□ -1.08
CBWD3-201ENST00000360171 MT1XP80297 61 aa8.25□□□□□ -1.09
CBWD3-201ENST00000360171 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
CBWD3-201ENST00000360171 LCE3AQ5TA76 89 aa8.2□□□□□ -1.1
CBWD3-201ENST00000360171 KRTAP8-1Q8IUC2 63 aa8.1□□□□□ -1.11
CBWD3-201ENST00000360171 SSPOA2VEC9 5147 aa8.06□□□□□ -1.12
CBWD3-201ENST00000360171 PRO2289Q9P1D8 64 aa8.05□□□□□ -1.12
CBWD3-201ENST00000360171 FSIP2Q5CZC0 6907 aa7.98□□□□□ -1.13
CBWD3-201ENST00000360171 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
CBWD3-201ENST00000360171 KRTAP10-7P60409 375 aaPredicted RBP7.94□□□□□ -1.14
CBWD3-201ENST00000360171 KRTAP9-2Q9BYQ4 174 aa7.87□□□□□ -1.15
CBWD3-201ENST00000360171 KRTAP10-12P60413 245 aa7.87□□□□□ -1.15
CBWD3-201ENST00000360171 KRTAP12-3P60328 96 aa7.83□□□□□ -1.16
CBWD3-201ENST00000360171 FCGBPQ9Y6R7 5405 aaPredicted RBP7.69□□□□□ -1.18
CBWD3-201ENST00000360171 KMT2DO14686 5537 aa7.65□□□□□ -1.19
CBWD3-201ENST00000360171 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
CBWD3-201ENST00000360171 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
CBWD3-201ENST00000360171 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
CBWD3-201ENST00000360171 INE1O15225 51 aa7.56□□□□□ -1.2
CBWD3-201ENST00000360171 KRTAP19-5Q3LI72 72 aa7.46□□□□□ -1.22
CBWD3-201ENST00000360171 LCE3CQ5T5A8 94 aa7.39□□□□□ -1.23
CBWD3-201ENST00000360171 KRTAP19-7Q3SYF9 63 aa7.37□□□□□ -1.23
CBWD3-201ENST00000360171 MACF1Q9UPN3 7388 aaKnown RBP7.32□□□□□ -1.24
CBWD3-201ENST00000360171 KRTAP9-6A0A140TA67 174 aa7.22□□□□□ -1.25
CBWD3-201ENST00000360171 MT1EP04732 61 aa7.22□□□□□ -1.25
CBWD3-201ENST00000360171 LOC100996750A0A140TA64 210 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms