RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 C20orf197Q8N268 126 aa9.02□□□□□ -0.97
HLA-DRB1-201ENST00000360004 KRTAP3-3Q9BYR6 98 aa9.02□□□□□ -0.97
HLA-DRB1-201ENST00000360004 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
HLA-DRB1-201ENST00000360004 DMAC1Q96GE9 116 aa8.98□□□□□ -0.97
HLA-DRB1-201ENST00000360004 KRTAP9-3Q9BYQ3 159 aa8.92□□□□□ -0.98
HLA-DRB1-201ENST00000360004 ACYP2P14621 99 aa8.91□□□□□ -0.98
HLA-DRB1-201ENST00000360004 COX7CP15954 63 aa8.89□□□□□ -0.99
HLA-DRB1-201ENST00000360004 KRTAP9-6A0A140TA67 174 aa8.86□□□□□ -0.99
HLA-DRB1-201ENST00000360004 ANAPC13Q9BS18 74 aa8.85□□□□□ -0.99
HLA-DRB1-201ENST00000360004 CRCT1Q9UGL9 99 aa8.85□□□□□ -0.99
HLA-DRB1-201ENST00000360004 FSIP2Q5CZC0 6907 aa8.84□□□□□ -0.99
HLA-DRB1-201ENST00000360004 CHKB-CPT1BH3BT56 60 aa8.83□□□□□ -1
HLA-DRB1-201ENST00000360004 SPANXA2-OT1Q8N9U9 137 aa8.82□□□□□ -1
HLA-DRB1-201ENST00000360004 LCE2BO14633 110 aa8.79□□□□□ -1
HLA-DRB1-201ENST00000360004 SPTSSBQ8NFR3 76 aa8.79□□□□□ -1
HLA-DRB1-201ENST00000360004 H0YAA0 97 aa8.76□□□□□ -1.01
HLA-DRB1-201ENST00000360004 ADM2Q7Z4H4 148 aa8.76□□□□□ -1.01
HLA-DRB1-201ENST00000360004 USH2AO75445 5202 aa8.7□□□□□ -1.02
HLA-DRB1-201ENST00000360004 CRIPTQ9P021 101 aa8.7□□□□□ -1.02
HLA-DRB1-201ENST00000360004 H7BZZ5 65 aa8.63□□□□□ -1.03
HLA-DRB1-201ENST00000360004 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
HLA-DRB1-201ENST00000360004 SPRR2GQ9BYE4 73 aa8.61□□□□□ -1.03
HLA-DRB1-201ENST00000360004 CYSTM1Q9H1C7 97 aa8.61□□□□□ -1.03
HLA-DRB1-201ENST00000360004 COA5Q86WW8 74 aa8.59□□□□□ -1.03
HLA-DRB1-201ENST00000360004 CCDC179H3BU77 68 aa8.58□□□□□ -1.04
HLA-DRB1-201ENST00000360004 Q5VV11 94 aa8.58□□□□□ -1.04
HLA-DRB1-201ENST00000360004 P0C880 135 aa8.54□□□□□ -1.04
HLA-DRB1-201ENST00000360004 R4GN34 69 aa8.54□□□□□ -1.04
HLA-DRB1-201ENST00000360004 SSPOA2VEC9 5147 aa8.53□□□□□ -1.04
HLA-DRB1-201ENST00000360004 M0QZ58 72 aa8.49□□□□□ -1.05
HLA-DRB1-201ENST00000360004 KRTAP19-8Q3LI54 63 aa8.48□□□□□ -1.05
HLA-DRB1-201ENST00000360004 KRTAP19-6Q3LI70 58 aa8.44□□□□□ -1.06
HLA-DRB1-201ENST00000360004 PCP4P48539 62 aa8.43□□□□□ -1.06
HLA-DRB1-201ENST00000360004 MT1BP07438 61 aa8.42□□□□□ -1.06
HLA-DRB1-201ENST00000360004 ATP5EP56381 51 aaPredicted RBP8.42□□□□□ -1.06
HLA-DRB1-201ENST00000360004 SEC61GP60059 68 aa8.41□□□□□ -1.06
HLA-DRB1-201ENST00000360004 LINC01554Q52M75 96 aa8.38□□□□□ -1.07
HLA-DRB1-201ENST00000360004 SERP1Q9Y6X1 66 aa8.36□□□□□ -1.07
HLA-DRB1-201ENST00000360004 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
HLA-DRB1-201ENST00000360004 TMEM258P61165 79 aa8.32□□□□□ -1.08
HLA-DRB1-201ENST00000360004 A6NN06 94 aa8.31□□□□□ -1.08
HLA-DRB1-201ENST00000360004 FCGBPQ9Y6R7 5405 aaPredicted RBP8.31□□□□□ -1.08
HLA-DRB1-201ENST00000360004 A0A1B0GU69 56 aa8.2□□□□□ -1.1
HLA-DRB1-201ENST00000360004 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.2□□□□□ -1.1
HLA-DRB1-201ENST00000360004 KRTAP10-5P60370 271 aa8.19□□□□□ -1.1
HLA-DRB1-201ENST00000360004 PRO2289Q9P1D8 64 aa8.15□□□□□ -1.1
HLA-DRB1-201ENST00000360004 A0A1B0GU33 70 aa8.14□□□□□ -1.11
HLA-DRB1-201ENST00000360004 PRR15LQ9BU68 103 aa8.11□□□□□ -1.11
HLA-DRB1-201ENST00000360004 KRTAP13-4Q3LI77 160 aa8.1□□□□□ -1.11
HLA-DRB1-201ENST00000360004 A0A0D9SG42 100 aa8.04□□□□□ -1.12
HLA-DRB1-201ENST00000360004 SPATA8Q6RVD6 105 aa8.04□□□□□ -1.12
HLA-DRB1-201ENST00000360004 KRTAP9-7A8MTY7 169 aa8.02□□□□□ -1.13
HLA-DRB1-201ENST00000360004 MACF1Q9UPN3 7388 aaKnown RBP8.01□□□□□ -1.13
HLA-DRB1-201ENST00000360004 MT1XP80297 61 aa8□□□□□ -1.13
HLA-DRB1-201ENST00000360004 LINC01558Q9Y6Z2 57 aa7.99□□□□□ -1.13
HLA-DRB1-201ENST00000360004 CAMK2N1Q7Z7J9 78 aa7.96□□□□□ -1.14
HLA-DRB1-201ENST00000360004 SMIM26A0A096LP01 95 aa7.94□□□□□ -1.14
HLA-DRB1-201ENST00000360004 SPINT4Q6UDR6 99 aa7.92□□□□□ -1.14
HLA-DRB1-201ENST00000360004 SYNE2Q8WXH0 6885 aaKnown RBP7.87□□□□□ -1.15
HLA-DRB1-201ENST00000360004 V9GYY9 64 aa7.84□□□□□ -1.15
HLA-DRB1-201ENST00000360004 A8MU10 97 aa7.81□□□□□ -1.16
HLA-DRB1-201ENST00000360004 KRTAP6-3Q3LI67 103 aa7.8□□□□□ -1.16
HLA-DRB1-201ENST00000360004 UQCR11O14957 56 aa7.79□□□□□ -1.16
HLA-DRB1-201ENST00000360004 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
HLA-DRB1-201ENST00000360004 KRTAP12-2P59991 146 aa7.74□□□□□ -1.17
HLA-DRB1-201ENST00000360004 PSPHP1O15172 72 aa7.72□□□□□ -1.17
HLA-DRB1-201ENST00000360004 Q1T7F1 81 aa7.72□□□□□ -1.17
HLA-DRB1-201ENST00000360004 KRTAP10-7P60409 375 aaPredicted RBP7.66□□□□□ -1.18
HLA-DRB1-201ENST00000360004 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.18
HLA-DRB1-201ENST00000360004 MIR22HGQ0VDD5 57 aa7.65□□□□□ -1.18
HLA-DRB1-201ENST00000360004 KRTAP8-1Q8IUC2 63 aa7.64□□□□□ -1.19
HLA-DRB1-201ENST00000360004 SVIPQ8NHG7 77 aa7.63□□□□□ -1.19
HLA-DRB1-201ENST00000360004 KRTAP10-12P60413 245 aa7.6□□□□□ -1.19
HLA-DRB1-201ENST00000360004 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
HLA-DRB1-201ENST00000360004 KRTAP5-9P26371 169 aa7.54□□□□□ -1.2
HLA-DRB1-201ENST00000360004 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
HLA-DRB1-201ENST00000360004 A6NED7 52 aa7.53□□□□□ -1.2
HLA-DRB1-201ENST00000360004 K7ERS5 55 aa7.53□□□□□ -1.2
HLA-DRB1-201ENST00000360004 SPRR2FQ96RM1 72 aa7.53□□□□□ -1.2
HLA-DRB1-201ENST00000360004 KMT2DO14686 5537 aa7.51□□□□□ -1.21
HLA-DRB1-201ENST00000360004 TNP1P09430 55 aa7.4□□□□□ -1.22
HLA-DRB1-201ENST00000360004 C10orf95Q9H7T3 257 aa7.39□□□□□ -1.23
HLA-DRB1-201ENST00000360004 MUC12Q9UKN1 5478 aa7.36□□□□□ -1.23
HLA-DRB1-201ENST00000360004 NEBP20929 6669 aa7.36□□□□□ -1.23
HLA-DRB1-201ENST00000360004 SPRR2EP22531 72 aa7.34□□□□□ -1.23
HLA-DRB1-201ENST00000360004 SPRR2BP35325 72 aa7.34□□□□□ -1.23
HLA-DRB1-201ENST00000360004 SPRR2AP35326 72 aa7.34□□□□□ -1.23
HLA-DRB1-201ENST00000360004 MDN1Q9NU22 5596 aa7.26□□□□□ -1.25
HLA-DRB1-201ENST00000360004 LCE1AQ5T7P2 110 aa7.2□□□□□ -1.26
HLA-DRB1-201ENST00000360004 CDC42SE1Q9NRR8 79 aa7.2□□□□□ -1.26
HLA-DRB1-201ENST00000360004 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
HLA-DRB1-201ENST00000360004 KRTAP25-1Q3LHN0 102 aa7.14□□□□□ -1.27
HLA-DRB1-201ENST00000360004 KRTAP19-5Q3LI72 72 aa7.12□□□□□ -1.27
HLA-DRB1-201ENST00000360004 KRTAP19-7Q3SYF9 63 aa7.12□□□□□ -1.27
HLA-DRB1-201ENST00000360004 SPRR2DP22532 72 aa7.1□□□□□ -1.27
HLA-DRB1-201ENST00000360004 KRTAP20-1Q3LI63 56 aa7.1□□□□□ -1.27
HLA-DRB1-201ENST00000360004 MT1EP04732 61 aa7.08□□□□□ -1.28
HLA-DRB1-201ENST00000360004 ROMO1P60602 79 aa7□□□□□ -1.29
HLA-DRB1-201ENST00000360004 KRTAP2-3P0C7H8 128 aa6.99□□□□□ -1.29
HLA-DRB1-201ENST00000360004 KRTAP2-4Q9BYR9 128 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms