RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 LCA10Q71F78 164 aa12.19□□□□□ -0.46
SHARPIN-201ENST00000359551 CHKB-CPT1BH3BT56 60 aa12.19□□□□□ -0.46
SHARPIN-201ENST00000359551 FLGP20930 4061 aaPredicted RBP12.18□□□□□ -0.46
SHARPIN-201ENST00000359551 KRTAP3-3Q9BYR6 98 aa12.16□□□□□ -0.46
SHARPIN-201ENST00000359551 FAT4Q6V0I7 4981 aa12.12□□□□□ -0.47
SHARPIN-201ENST00000359551 RPS28P62857 69 aaKnown RBP12.12□□□□□ -0.47
SHARPIN-201ENST00000359551 MT1HP80294 61 aa12.05□□□□□ -0.48
SHARPIN-201ENST00000359551 SPTSSBQ8NFR3 76 aa12.04□□□□□ -0.48
SHARPIN-201ENST00000359551 CSAG1Q6PB30 78 aa12□□□□□ -0.49
SHARPIN-201ENST00000359551 SMIM26A0A096LP01 95 aa11.88□□□□□ -0.51
SHARPIN-201ENST00000359551 M0R2T5 61 aa11.84□□□□□ -0.51
SHARPIN-201ENST00000359551 LCE2AQ5TA79 106 aaPredicted RBP11.81□□□□□ -0.52
SHARPIN-201ENST00000359551 H0YAA0 97 aa11.76□□□□□ -0.53
SHARPIN-201ENST00000359551 LINC01558Q9Y6Z2 57 aa11.76□□□□□ -0.53
SHARPIN-201ENST00000359551 Q1T7F1 81 aa11.74□□□□□ -0.53
SHARPIN-201ENST00000359551 V9GYY9 64 aa11.71□□□□□ -0.54
SHARPIN-201ENST00000359551 KRTAP3-2Q9BYR7 98 aa11.66□□□□□ -0.54
SHARPIN-201ENST00000359551 KRTAP10-6P60371 365 aaPredicted RBP11.65□□□□□ -0.55
SHARPIN-201ENST00000359551 ADM2Q7Z4H4 148 aa11.64□□□□□ -0.55
SHARPIN-201ENST00000359551 A0A1B0GU69 56 aa11.63□□□□□ -0.55
SHARPIN-201ENST00000359551 SEC61GP60059 68 aa11.62□□□□□ -0.55
SHARPIN-201ENST00000359551 LORP23490 312 aaPredicted RBP11.61□□□□□ -0.55
SHARPIN-201ENST00000359551 KRTAP9-8Q9BYQ0 159 aa11.59□□□□□ -0.55
SHARPIN-201ENST00000359551 PRR15LQ9BU68 103 aa11.56□□□□□ -0.56
SHARPIN-201ENST00000359551 P0C880 135 aa11.55□□□□□ -0.56
SHARPIN-201ENST00000359551 MT2AP02795 61 aa11.52□□□□□ -0.57
SHARPIN-201ENST00000359551 PSPHP1O15172 72 aa11.49□□□□□ -0.57
SHARPIN-201ENST00000359551 MT1FP04733 61 aa11.44□□□□□ -0.58
SHARPIN-201ENST00000359551 Q5VV11 94 aa11.43□□□□□ -0.58
SHARPIN-201ENST00000359551 A0A1B0GU33 70 aa11.37□□□□□ -0.59
SHARPIN-201ENST00000359551 KRTAP10-10P60014 251 aa11.36□□□□□ -0.59
SHARPIN-201ENST00000359551 CRIPTQ9P021 101 aa11.33□□□□□ -0.6
SHARPIN-201ENST00000359551 KRTAP9-2Q9BYQ4 174 aa11.27□□□□□ -0.61
SHARPIN-201ENST00000359551 M0QZ58 72 aa11.26□□□□□ -0.61
SHARPIN-201ENST00000359551 R4GN34 69 aa11.25□□□□□ -0.61
SHARPIN-201ENST00000359551 UQCR11O14957 56 aa11.24□□□□□ -0.61
SHARPIN-201ENST00000359551 KRTAP13-4Q3LI77 160 aa11.24□□□□□ -0.61
SHARPIN-201ENST00000359551 KRTAP9-3Q9BYQ3 159 aa11.18□□□□□ -0.62
SHARPIN-201ENST00000359551 SPATA8Q6RVD6 105 aa11.17□□□□□ -0.62
SHARPIN-201ENST00000359551 SPRR2GQ9BYE4 73 aa11.17□□□□□ -0.62
SHARPIN-201ENST00000359551 KRTAP19-1Q8IUB9 90 aa11.15□□□□□ -0.62
SHARPIN-201ENST00000359551 A6NED7 52 aa11.14□□□□□ -0.63
SHARPIN-201ENST00000359551 MIR22HGQ0VDD5 57 aa11.08□□□□□ -0.64
SHARPIN-201ENST00000359551 LCE2DQ5TA82 110 aaPredicted RBP11.08□□□□□ -0.64
SHARPIN-201ENST00000359551 A8MU10 97 aa10.98□□□□□ -0.65
SHARPIN-201ENST00000359551 LINC01554Q52M75 96 aa10.98□□□□□ -0.65
SHARPIN-201ENST00000359551 A0A0D9SG42 100 aa10.95□□□□□ -0.66
SHARPIN-201ENST00000359551 CDC42SE1Q9NRR8 79 aa10.95□□□□□ -0.66
SHARPIN-201ENST00000359551 KRTAP19-8Q3LI54 63 aa10.93□□□□□ -0.66
SHARPIN-201ENST00000359551 A6NN06 94 aa10.89□□□□□ -0.67
SHARPIN-201ENST00000359551 LCE2BO14633 110 aa10.89□□□□□ -0.67
SHARPIN-201ENST00000359551 FSIP2Q5CZC0 6907 aa10.83□□□□□ -0.67
SHARPIN-201ENST00000359551 KRTAP9-6A0A140TA67 174 aa10.81□□□□□ -0.68
SHARPIN-201ENST00000359551 KRTAP12-1P59990 96 aa10.81□□□□□ -0.68
SHARPIN-201ENST00000359551 BRK1Q8WUW1 75 aa10.81□□□□□ -0.68
SHARPIN-201ENST00000359551 MT1BP07438 61 aa10.79□□□□□ -0.68
SHARPIN-201ENST00000359551 KRTAP12-2P59991 146 aa10.75□□□□□ -0.69
SHARPIN-201ENST00000359551 SPINT4Q6UDR6 99 aa10.72□□□□□ -0.69
SHARPIN-201ENST00000359551 CRCT1Q9UGL9 99 aa10.69□□□□□ -0.7
SHARPIN-201ENST00000359551 PLAC4Q8WY50 150 aa10.68□□□□□ -0.7
SHARPIN-201ENST00000359551 USH2AO75445 5202 aa10.62□□□□□ -0.71
SHARPIN-201ENST00000359551 K7ERS5 55 aa10.61□□□□□ -0.71
SHARPIN-201ENST00000359551 CAMK2N1Q7Z7J9 78 aa10.49□□□□□ -0.73
SHARPIN-201ENST00000359551 PRO0628Q9UI54 55 aa10.46□□□□□ -0.74
SHARPIN-201ENST00000359551 MT1XP80297 61 aa10.37□□□□□ -0.75
SHARPIN-201ENST00000359551 KRTAP10-5P60370 271 aa10.34□□□□□ -0.75
SHARPIN-201ENST00000359551 KRTAP19-6Q3LI70 58 aa10.33□□□□□ -0.76
SHARPIN-201ENST00000359551 SSPOA2VEC9 5147 aa10.32□□□□□ -0.76
SHARPIN-201ENST00000359551 PRO2289Q9P1D8 64 aa10.28□□□□□ -0.76
SHARPIN-201ENST00000359551 C10orf95Q9H7T3 257 aa10.25□□□□□ -0.77
SHARPIN-201ENST00000359551 PMAIP1Q13794 54 aa10.22□□□□□ -0.77
SHARPIN-201ENST00000359551 ROMO1P60602 79 aa10.15□□□□□ -0.78
SHARPIN-201ENST00000359551 FCGBPQ9Y6R7 5405 aaPredicted RBP10.07□□□□□ -0.8
SHARPIN-201ENST00000359551 TNP1P09430 55 aa9.96□□□□□ -0.82
SHARPIN-201ENST00000359551 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.93□□□□□ -0.82
SHARPIN-201ENST00000359551 KRTAP25-1Q3LHN0 102 aa9.93□□□□□ -0.82
SHARPIN-201ENST00000359551 KRTAP10-7P60409 375 aaPredicted RBP9.92□□□□□ -0.82
SHARPIN-201ENST00000359551 KRTAP10-12P60413 245 aa9.86□□□□□ -0.83
SHARPIN-201ENST00000359551 MACF1Q9UPN3 7388 aaKnown RBP9.74□□□□□ -0.85
SHARPIN-201ENST00000359551 KRTAP9-7A8MTY7 169 aa9.74□□□□□ -0.85
SHARPIN-201ENST00000359551 KTN1-AS1Q86SY8 53 aa9.73□□□□□ -0.85
SHARPIN-201ENST00000359551 KRTAP23-1A1A580 65 aa9.64□□□□□ -0.87
SHARPIN-201ENST00000359551 SYNE2Q8WXH0 6885 aaKnown RBP9.61□□□□□ -0.87
SHARPIN-201ENST00000359551 LCE3AQ5TA76 89 aa9.59□□□□□ -0.87
SHARPIN-201ENST00000359551 PRAC1Q96KF2 57 aa9.59□□□□□ -0.87
SHARPIN-201ENST00000359551 KRTAP4-8A0A0G2JLE6 195 aa9.58□□□□□ -0.88
SHARPIN-201ENST00000359551 KRTAP4-8Q9BYQ9 185 aa9.58□□□□□ -0.88
SHARPIN-201ENST00000359551 PP632Q6XCG6 107 aa9.54□□□□□ -0.88
SHARPIN-201ENST00000359551 KMT2DO14686 5537 aa9.51□□□□□ -0.89
SHARPIN-201ENST00000359551 KRTAP8-1Q8IUC2 63 aa9.43□□□□□ -0.9
SHARPIN-201ENST00000359551 KRTAP6-3Q3LI67 103 aa9.38□□□□□ -0.91
SHARPIN-201ENST00000359551 KRTAP19-5Q3LI72 72 aa9.28□□□□□ -0.92
SHARPIN-201ENST00000359551 KRTAP19-7Q3SYF9 63 aa9.26□□□□□ -0.93
SHARPIN-201ENST00000359551 KRTAP12-3P60328 96 aa9.23□□□□□ -0.93
SHARPIN-201ENST00000359551 KRTAP5-9P26371 169 aa9.15□□□□□ -0.94
SHARPIN-201ENST00000359551 SVIPQ8NHG7 77 aa9.12□□□□□ -0.95
SHARPIN-201ENST00000359551 MT1EP04732 61 aa9.11□□□□□ -0.95
SHARPIN-201ENST00000359551 SPRR2FQ96RM1 72 aa9.09□□□□□ -0.95
SHARPIN-201ENST00000359551 MUC12Q9UKN1 5478 aa9.02□□□□□ -0.97
SHARPIN-201ENST00000359551 KRTAP15-1Q3LI76 137 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 298 ms