RNA–Protein interactions for RNA: ENST00000358506.6

PPP1CB-202, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PPP1CB, Length 4,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-202ENST00000358506 KRTAP12-1P59990 96 aa7.94□□□□□ -1.14
PPP1CB-202ENST00000358506 STARD9Q9P2P6 4700 aa7.92□□□□□ -1.14
PPP1CB-202ENST00000358506 KRTAP3-3Q9BYR6 98 aa7.87□□□□□ -1.15
PPP1CB-202ENST00000358506 DNAH17Q9UFH2 4485 aa7.87□□□□□ -1.15
PPP1CB-202ENST00000358506 PRKDCP78527 4128 aaKnown RBP7.81□□□□□ -1.16
PPP1CB-202ENST00000358506 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
PPP1CB-202ENST00000358506 DYNC1H1Q14204 4646 aaKnown RBP7.74□□□□□ -1.17
PPP1CB-202ENST00000358506 ANK2Q01484 3957 aa7.73□□□□□ -1.17
PPP1CB-202ENST00000358506 FAT1Q14517 4588 aa7.71□□□□□ -1.18
PPP1CB-202ENST00000358506 DNAH2Q9P225 4427 aa7.69□□□□□ -1.18
PPP1CB-202ENST00000358506 LRP1BQ9NZR2 4599 aa7.68□□□□□ -1.18
PPP1CB-202ENST00000358506 PRO2289Q9P1D8 64 aa7.66□□□□□ -1.18
PPP1CB-202ENST00000358506 DNAH3Q8TD57 4116 aa7.65□□□□□ -1.19
PPP1CB-202ENST00000358506 KMT2AQ03164 3969 aa7.62□□□□□ -1.19
PPP1CB-202ENST00000358506 DNAH8Q96JB1 4490 aa7.61□□□□□ -1.19
PPP1CB-202ENST00000358506 DYNC2H1Q8NCM8 4307 aaKnown RBP7.55□□□□□ -1.2
PPP1CB-202ENST00000358506 CMYA5Q8N3K9 4069 aa7.54□□□□□ -1.2
PPP1CB-202ENST00000358506 RYR1P21817 5038 aa7.47□□□□□ -1.21
PPP1CB-202ENST00000358506 FAT2Q9NYQ8 4349 aa7.46□□□□□ -1.22
PPP1CB-202ENST00000358506 SACSQ9NZJ4 4579 aa7.45□□□□□ -1.22
PPP1CB-202ENST00000358506 LYSTQ99698 3801 aa7.41□□□□□ -1.22
PPP1CB-202ENST00000358506 LORP23490 312 aaPredicted RBP7.39□□□□□ -1.23
PPP1CB-202ENST00000358506 KIAA1109Q2LD37 5005 aa7.39□□□□□ -1.23
PPP1CB-202ENST00000358506 VPS13BQ7Z7G8 4022 aa7.37□□□□□ -1.23
PPP1CB-202ENST00000358506 KRTAP4-1Q9BYQ7 146 aa7.35□□□□□ -1.23
PPP1CB-202ENST00000358506 DNAH7Q8WXX0 4024 aa7.3□□□□□ -1.24
PPP1CB-202ENST00000358506 KRTAP17-1Q9BYP8 105 aa7.28□□□□□ -1.24
PPP1CB-202ENST00000358506 DNAH6Q9C0G6 4158 aa7.27□□□□□ -1.25
PPP1CB-202ENST00000358506 HECTD4Q9Y4D8 3996 aa7.25□□□□□ -1.25
PPP1CB-202ENST00000358506 RYR3Q15413 4870 aa7.25□□□□□ -1.25
PPP1CB-202ENST00000358506 APOBP04114 4563 aaKnown RBP7.24□□□□□ -1.25
PPP1CB-202ENST00000358506 MYCBP2O75592 4640 aa7.24□□□□□ -1.25
PPP1CB-202ENST00000358506 FRAS1Q86XX4 4008 aa7.23□□□□□ -1.25
PPP1CB-202ENST00000358506 HYDINQ4G0P3 5121 aa7.19□□□□□ -1.26
PPP1CB-202ENST00000358506 LRP1Q07954 4544 aaKnown RBP7.18□□□□□ -1.26
PPP1CB-202ENST00000358506 RYR2Q92736 4967 aa7.14□□□□□ -1.27
PPP1CB-202ENST00000358506 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
PPP1CB-202ENST00000358506 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
PPP1CB-202ENST00000358506 FAT3Q8TDW7 4589 aa7.02□□□□□ -1.29
PPP1CB-202ENST00000358506 PKHD1P08F94 4074 aa6.99□□□□□ -1.29
PPP1CB-202ENST00000358506 MT1HP80294 61 aa6.98□□□□□ -1.29
PPP1CB-202ENST00000358506 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
PPP1CB-202ENST00000358506 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
PPP1CB-202ENST00000358506 MT2AP02795 61 aa6.89□□□□□ -1.31
PPP1CB-202ENST00000358506 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
PPP1CB-202ENST00000358506 PKD1P98161 4303 aa6.86□□□□□ -1.31
PPP1CB-202ENST00000358506 HERC2O95714 4834 aa6.86□□□□□ -1.31
PPP1CB-202ENST00000358506 HSPG2P98160 4391 aa6.85□□□□□ -1.31
PPP1CB-202ENST00000358506 SPRR2GQ9BYE4 73 aa6.84□□□□□ -1.32
PPP1CB-202ENST00000358506 KMT2CQ8NEZ4 4911 aaKnown RBP6.82□□□□□ -1.32
PPP1CB-202ENST00000358506 LRP2P98164 4655 aa6.82□□□□□ -1.32
PPP1CB-202ENST00000358506 MT1FP04733 61 aa6.79□□□□□ -1.32
PPP1CB-202ENST00000358506 BIRC6Q9NR09 4857 aa6.67□□□□□ -1.34
PPP1CB-202ENST00000358506 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
PPP1CB-202ENST00000358506 LPAP08519 4548 aa6.55□□□□□ -1.36
PPP1CB-202ENST00000358506 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
PPP1CB-202ENST00000358506 EPPK1P58107 5090 aaKnown RBP6.51□□□□□ -1.37
PPP1CB-202ENST00000358506 LCE2CQ5TA81 110 aa6.49□□□□□ -1.37
PPP1CB-202ENST00000358506 TNXBP22105 4242 aa6.48□□□□□ -1.37
PPP1CB-202ENST00000358506 HERC1Q15751 4861 aa6.48□□□□□ -1.37
PPP1CB-202ENST00000358506 PKHD1L1Q86WI1 4243 aa6.48□□□□□ -1.37
PPP1CB-202ENST00000358506 KRTAP19-8Q3LI54 63 aa6.45□□□□□ -1.38
PPP1CB-202ENST00000358506 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
PPP1CB-202ENST00000358506 ABCA13Q86UQ4 5058 aa6.43□□□□□ -1.38
PPP1CB-202ENST00000358506 PCLOQ9Y6V0 5065 aa6.42□□□□□ -1.38
PPP1CB-202ENST00000358506 KRTAP9-8Q9BYQ0 159 aa6.41□□□□□ -1.38
PPP1CB-202ENST00000358506 INE1O15225 51 aa6.39□□□□□ -1.39
PPP1CB-202ENST00000358506 KRTAP19-2Q3LHN2 52 aa6.38□□□□□ -1.39
PPP1CB-202ENST00000358506 MT1BP07438 61 aa6.31□□□□□ -1.4
PPP1CB-202ENST00000358506 KRTAP19-5Q3LI72 72 aa6.31□□□□□ -1.4
PPP1CB-202ENST00000358506 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
PPP1CB-202ENST00000358506 MT1XP80297 61 aa6.29□□□□□ -1.4
PPP1CB-202ENST00000358506 KRTAP10-5P60370 271 aa6.24□□□□□ -1.41
PPP1CB-202ENST00000358506 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
PPP1CB-202ENST00000358506 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
PPP1CB-202ENST00000358506 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
PPP1CB-202ENST00000358506 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
PPP1CB-202ENST00000358506 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
PPP1CB-202ENST00000358506 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
PPP1CB-202ENST00000358506 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
PPP1CB-202ENST00000358506 RNF213Q63HN8 5207 aa6□□□□□ -1.45
PPP1CB-202ENST00000358506 LCE2BO14633 110 aa5.98□□□□□ -1.45
PPP1CB-202ENST00000358506 FAT4Q6V0I7 4981 aa5.96□□□□□ -1.46
PPP1CB-202ENST00000358506 KRTAP19-4Q3LI73 84 aa5.93□□□□□ -1.46
PPP1CB-202ENST00000358506 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.46
PPP1CB-202ENST00000358506 HMCN2Q8NDA2 5059 aa5.88□□□□□ -1.47
PPP1CB-202ENST00000358506 MUC2Q02817 5179 aa5.86□□□□□ -1.47
PPP1CB-202ENST00000358506 UBR4Q5T4S7 5183 aa5.82□□□□□ -1.48
PPP1CB-202ENST00000358506 LCE2AQ5TA79 106 aaPredicted RBP5.71□□□□□ -1.5
PPP1CB-202ENST00000358506 MT1GP13640 62 aa5.67□□□□□ -1.5
PPP1CB-202ENST00000358506 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
PPP1CB-202ENST00000358506 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
PPP1CB-202ENST00000358506 SPRR2EP22531 72 aa5.6□□□□□ -1.51
PPP1CB-202ENST00000358506 SPRR2BP35325 72 aa5.6□□□□□ -1.51
PPP1CB-202ENST00000358506 SPRR2AP35326 72 aa5.6□□□□□ -1.51
PPP1CB-202ENST00000358506 MT1LQ93083 61 aa5.59□□□□□ -1.51
PPP1CB-202ENST00000358506 MT1EP04732 61 aa5.59□□□□□ -1.52
PPP1CB-202ENST00000358506 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
PPP1CB-202ENST00000358506 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
PPP1CB-202ENST00000358506 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms