RNA–Protein interactions for RNA: ENST00000357058.7

RNF38-204, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-204ENST00000357058 STARD9Q9P2P6 4700 aa9.58□□□□□ -0.88
RNF38-204ENST00000357058 DNAH17Q9UFH2 4485 aa9.58□□□□□ -0.88
RNF38-204ENST00000357058 ANK2Q01484 3957 aa9.56□□□□□ -0.88
RNF38-204ENST00000357058 KRTAP13-4Q3LI77 160 aa9.54□□□□□ -0.88
RNF38-204ENST00000357058 PRO2289Q9P1D8 64 aa9.52□□□□□ -0.88
RNF38-204ENST00000357058 PRKDCP78527 4128 aaKnown RBP9.47□□□□□ -0.89
RNF38-204ENST00000357058 KRTAP3-3Q9BYR6 98 aa9.47□□□□□ -0.89
RNF38-204ENST00000357058 DNAH3Q8TD57 4116 aa9.4□□□□□ -0.9
RNF38-204ENST00000357058 DYNC1H1Q14204 4646 aaKnown RBP9.38□□□□□ -0.91
RNF38-204ENST00000357058 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
RNF38-204ENST00000357058 DNAH2Q9P225 4427 aa9.35□□□□□ -0.91
RNF38-204ENST00000357058 CMYA5Q8N3K9 4069 aa9.33□□□□□ -0.92
RNF38-204ENST00000357058 LRP1BQ9NZR2 4599 aa9.33□□□□□ -0.92
RNF38-204ENST00000357058 DYNC2H1Q8NCM8 4307 aaKnown RBP9.23□□□□□ -0.93
RNF38-204ENST00000357058 FAT1Q14517 4588 aa9.23□□□□□ -0.93
RNF38-204ENST00000357058 KMT2AQ03164 3969 aa9.23□□□□□ -0.93
RNF38-204ENST00000357058 DNAH8Q96JB1 4490 aa9.16□□□□□ -0.94
RNF38-204ENST00000357058 FAT2Q9NYQ8 4349 aa9.15□□□□□ -0.94
RNF38-204ENST00000357058 SACSQ9NZJ4 4579 aa9.09□□□□□ -0.95
RNF38-204ENST00000357058 RYR1P21817 5038 aa8.98□□□□□ -0.97
RNF38-204ENST00000357058 DNAH6Q9C0G6 4158 aa8.97□□□□□ -0.97
RNF38-204ENST00000357058 VPS13BQ7Z7G8 4022 aa8.94□□□□□ -0.98
RNF38-204ENST00000357058 KRTAP4-1Q9BYQ7 146 aa8.92□□□□□ -0.98
RNF38-204ENST00000357058 LYSTQ99698 3801 aa8.91□□□□□ -0.98
RNF38-204ENST00000357058 LORP23490 312 aaPredicted RBP8.91□□□□□ -0.98
RNF38-204ENST00000357058 DNAH7Q8WXX0 4024 aa8.87□□□□□ -0.99
RNF38-204ENST00000357058 HECTD4Q9Y4D8 3996 aa8.83□□□□□ -1
RNF38-204ENST00000357058 KRTAP17-1Q9BYP8 105 aa8.77□□□□□ -1.01
RNF38-204ENST00000357058 APOBP04114 4563 aaKnown RBP8.76□□□□□ -1.01
RNF38-204ENST00000357058 FRAS1Q86XX4 4008 aa8.76□□□□□ -1.01
RNF38-204ENST00000357058 KIAA1109Q2LD37 5005 aa8.76□□□□□ -1.01
RNF38-204ENST00000357058 RYR3Q15413 4870 aa8.74□□□□□ -1.01
RNF38-204ENST00000357058 KRTAP15-1Q3LI76 137 aa8.7□□□□□ -1.02
RNF38-204ENST00000357058 RYR2Q92736 4967 aa8.69□□□□□ -1.02
RNF38-204ENST00000357058 HYDINQ4G0P3 5121 aa8.66□□□□□ -1.02
RNF38-204ENST00000357058 KRTAP10-12P60413 245 aa8.65□□□□□ -1.02
RNF38-204ENST00000357058 MT1HP80294 61 aa8.58□□□□□ -1.04
RNF38-204ENST00000357058 LRP1Q07954 4544 aaKnown RBP8.57□□□□□ -1.04
RNF38-204ENST00000357058 MYCBP2O75592 4640 aa8.57□□□□□ -1.04
RNF38-204ENST00000357058 LCE3AQ5TA76 89 aa8.44□□□□□ -1.06
RNF38-204ENST00000357058 FAT3Q8TDW7 4589 aa8.43□□□□□ -1.06
RNF38-204ENST00000357058 PKHD1P08F94 4074 aa8.42□□□□□ -1.06
RNF38-204ENST00000357058 KRTAP23-1A1A580 65 aa8.42□□□□□ -1.06
RNF38-204ENST00000357058 MT2AP02795 61 aa8.41□□□□□ -1.06
RNF38-204ENST00000357058 KRTAP12-3P60328 96 aa8.39□□□□□ -1.07
RNF38-204ENST00000357058 HSPG2P98160 4391 aa8.39□□□□□ -1.07
RNF38-204ENST00000357058 PKD1P98161 4303 aa8.35□□□□□ -1.07
RNF38-204ENST00000357058 SPRR2GQ9BYE4 73 aa8.31□□□□□ -1.08
RNF38-204ENST00000357058 MT1FP04733 61 aa8.29□□□□□ -1.08
RNF38-204ENST00000357058 HERC2O95714 4834 aa8.26□□□□□ -1.09
RNF38-204ENST00000357058 BIRC6Q9NR09 4857 aa8.21□□□□□ -1.1
RNF38-204ENST00000357058 KMT2CQ8NEZ4 4911 aaKnown RBP8.17□□□□□ -1.1
RNF38-204ENST00000357058 LRP2P98164 4655 aa8.08□□□□□ -1.12
RNF38-204ENST00000357058 CRCT1Q9UGL9 99 aa8.06□□□□□ -1.12
RNF38-204ENST00000357058 KRTAP8-1Q8IUC2 63 aa8□□□□□ -1.13
RNF38-204ENST00000357058 PKHD1L1Q86WI1 4243 aa7.97□□□□□ -1.13
RNF38-204ENST00000357058 TNXBP22105 4242 aa7.96□□□□□ -1.13
RNF38-204ENST00000357058 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
RNF38-204ENST00000357058 LPAP08519 4548 aa7.93□□□□□ -1.14
RNF38-204ENST00000357058 HERC1Q15751 4861 aa7.89□□□□□ -1.15
RNF38-204ENST00000357058 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
RNF38-204ENST00000357058 EPPK1P58107 5090 aaKnown RBP7.86□□□□□ -1.15
RNF38-204ENST00000357058 KRTAP19-8Q3LI54 63 aa7.83□□□□□ -1.16
RNF38-204ENST00000357058 INE1O15225 51 aa7.82□□□□□ -1.16
RNF38-204ENST00000357058 KRTAP9-8Q9BYQ0 159 aa7.78□□□□□ -1.16
RNF38-204ENST00000357058 PCLOQ9Y6V0 5065 aa7.77□□□□□ -1.17
RNF38-204ENST00000357058 ABCA13Q86UQ4 5058 aa7.73□□□□□ -1.17
RNF38-204ENST00000357058 KRTAP19-5Q3LI72 72 aa7.71□□□□□ -1.18
RNF38-204ENST00000357058 KRTAP19-2Q3LHN2 52 aa7.66□□□□□ -1.18
RNF38-204ENST00000357058 MT1BP07438 61 aa7.65□□□□□ -1.18
RNF38-204ENST00000357058 KRTAP10-7P60409 375 aaPredicted RBP7.64□□□□□ -1.19
RNF38-204ENST00000357058 MT1XP80297 61 aa7.62□□□□□ -1.19
RNF38-204ENST00000357058 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
RNF38-204ENST00000357058 KRTAP9-3Q9BYQ3 159 aa7.56□□□□□ -1.2
RNF38-204ENST00000357058 SPRR2FQ96RM1 72 aa7.51□□□□□ -1.21
RNF38-204ENST00000357058 LCE3CQ5T5A8 94 aa7.48□□□□□ -1.21
RNF38-204ENST00000357058 MUC17Q685J3 4493 aa7.47□□□□□ -1.21
RNF38-204ENST00000357058 FLGP20930 4061 aaPredicted RBP7.46□□□□□ -1.22
RNF38-204ENST00000357058 KRTAP19-4Q3LI73 84 aa7.28□□□□□ -1.24
RNF38-204ENST00000357058 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
RNF38-204ENST00000357058 LCE2BO14633 110 aa7.26□□□□□ -1.25
RNF38-204ENST00000357058 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
RNF38-204ENST00000357058 RNF213Q63HN8 5207 aa7.22□□□□□ -1.25
RNF38-204ENST00000357058 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
RNF38-204ENST00000357058 HMCN2Q8NDA2 5059 aa7.1□□□□□ -1.27
RNF38-204ENST00000357058 SPRR2EP22531 72 aa7.02□□□□□ -1.29
RNF38-204ENST00000357058 SPRR2BP35325 72 aa7.02□□□□□ -1.29
RNF38-204ENST00000357058 SPRR2AP35326 72 aa7.02□□□□□ -1.29
RNF38-204ENST00000357058 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
RNF38-204ENST00000357058 LCE2AQ5TA79 106 aaPredicted RBP6.97□□□□□ -1.29
RNF38-204ENST00000357058 MT1GP13640 62 aa6.93□□□□□ -1.3
RNF38-204ENST00000357058 UBR4Q5T4S7 5183 aa6.93□□□□□ -1.3
RNF38-204ENST00000357058 MUC2Q02817 5179 aa6.87□□□□□ -1.31
RNF38-204ENST00000357058 KRTAP19-6Q3LI70 58 aa6.82□□□□□ -1.32
RNF38-204ENST00000357058 MT1EP04732 61 aa6.8□□□□□ -1.32
RNF38-204ENST00000357058 MT1LQ93083 61 aa6.79□□□□□ -1.32
RNF38-204ENST00000357058 SPRR2DP22532 72 aa6.78□□□□□ -1.32
RNF38-204ENST00000357058 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.33
RNF38-204ENST00000357058 KRTAP19-3Q7Z4W3 81 aa6.77□□□□□ -1.33
RNF38-204ENST00000357058 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms