RNA–Protein interactions for RNA: ENST00000356508.9

PLD3-201, Transcript of phospholipase D family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLD3, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-201ENST00000356508 MYCBP2O75592 4640 aa8.72□□□□□ -1.01
PLD3-201ENST00000356508 FAT3Q8TDW7 4589 aa8.71□□□□□ -1.02
PLD3-201ENST00000356508 IGKV2-30P06310 120 aa8.7□□□□□ -1.02
PLD3-201ENST00000356508 A8MUU9 505 aa8.66□□□□□ -1.02
PLD3-201ENST00000356508 TNXBP22105 4242 aa8.66□□□□□ -1.02
PLD3-201ENST00000356508 DMBT1Q9UGM3 2413 aaPredicted RBP8.65□□□□□ -1.03
PLD3-201ENST00000356508 ABCA13Q86UQ4 5058 aa8.65□□□□□ -1.03
PLD3-201ENST00000356508 IGKV2D-30A0A075B6S6 120 aa8.55□□□□□ -1.04
PLD3-201ENST00000356508 KRTAP16-1A8MUX0 517 aa8.52□□□□□ -1.04
PLD3-201ENST00000356508 H0YAA0 97 aa8.48□□□□□ -1.05
PLD3-201ENST00000356508 P0C880 135 aa8.48□□□□□ -1.05
PLD3-201ENST00000356508 C9orf92A6NGG3 77 aa8.47□□□□□ -1.05
PLD3-201ENST00000356508 PCLOQ9Y6V0 5065 aa8.47□□□□□ -1.05
PLD3-201ENST00000356508 TPRXLQ17RH7 258 aa8.4□□□□□ -1.06
PLD3-201ENST00000356508 A0A1B0GU33 70 aa8.35□□□□□ -1.07
PLD3-201ENST00000356508 C20orf166-AS1Q96NR2 134 aa8.33□□□□□ -1.08
PLD3-201ENST00000356508 K7ERS5 55 aa8.32□□□□□ -1.08
PLD3-201ENST00000356508 H1FX-AS1Q4G0G2 97 aa8.32□□□□□ -1.08
PLD3-201ENST00000356508 XP32Q5T750 250 aa8.31□□□□□ -1.08
PLD3-201ENST00000356508 RPL37P61927 97 aaKnown RBP8.25□□□□□ -1.09
PLD3-201ENST00000356508 HERC1Q15751 4861 aa8.21□□□□□ -1.1
PLD3-201ENST00000356508 KRTAP15-1Q3LI76 137 aa8.17□□□□□ -1.1
PLD3-201ENST00000356508 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
PLD3-201ENST00000356508 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
PLD3-201ENST00000356508 LPAP08519 4548 aa8.14□□□□□ -1.11
PLD3-201ENST00000356508 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
PLD3-201ENST00000356508 NDUFAF8A1L188 74 aa8.09□□□□□ -1.11
PLD3-201ENST00000356508 A0A0A0MQY5 61 aa8.07□□□□□ -1.12
PLD3-201ENST00000356508 HMCN2Q8NDA2 5059 aa8.06□□□□□ -1.12
PLD3-201ENST00000356508 COX6B2Q6YFQ2 88 aa8.06□□□□□ -1.12
PLD3-201ENST00000356508 LRP2P98164 4655 aa8.04□□□□□ -1.12
PLD3-201ENST00000356508 KRTAP3-1Q9BYR8 98 aa7.99□□□□□ -1.13
PLD3-201ENST00000356508 KRTAP4-1Q9BYQ7 146 aa7.87□□□□□ -1.15
PLD3-201ENST00000356508 MUC17Q685J3 4493 aa7.84□□□□□ -1.15
PLD3-201ENST00000356508 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
PLD3-201ENST00000356508 KRTAP10-6P60371 365 aaPredicted RBP7.81□□□□□ -1.16
PLD3-201ENST00000356508 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
PLD3-201ENST00000356508 UBR4Q5T4S7 5183 aa7.74□□□□□ -1.17
PLD3-201ENST00000356508 LUZP6Q538Z0 58 aa7.71□□□□□ -1.18
PLD3-201ENST00000356508 S4R3F8 94 aa7.71□□□□□ -1.18
PLD3-201ENST00000356508 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
PLD3-201ENST00000356508 MUC2Q02817 5179 aa7.7□□□□□ -1.18
PLD3-201ENST00000356508 A0A0D9SG42 100 aa7.68□□□□□ -1.18
PLD3-201ENST00000356508 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
PLD3-201ENST00000356508 RNF213Q63HN8 5207 aa7.63□□□□□ -1.19
PLD3-201ENST00000356508 KRTAP19-2Q3LHN2 52 aa7.6□□□□□ -1.19
PLD3-201ENST00000356508 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
PLD3-201ENST00000356508 KRTAP12-1P59990 96 aa7.54□□□□□ -1.2
PLD3-201ENST00000356508 LCE2CQ5TA81 110 aa7.52□□□□□ -1.2
PLD3-201ENST00000356508 M0R2T5 61 aa7.44□□□□□ -1.22
PLD3-201ENST00000356508 PLAC4Q8WY50 150 aa7.42□□□□□ -1.22
PLD3-201ENST00000356508 MT1HP80294 61 aa7.42□□□□□ -1.22
PLD3-201ENST00000356508 M0QZ58 72 aa7.39□□□□□ -1.23
PLD3-201ENST00000356508 FLGP20930 4061 aaPredicted RBP7.37□□□□□ -1.23
PLD3-201ENST00000356508 FAT4Q6V0I7 4981 aa7.36□□□□□ -1.23
PLD3-201ENST00000356508 LCE2AQ5TA79 106 aaPredicted RBP7.24□□□□□ -1.25
PLD3-201ENST00000356508 PP632Q6XCG6 107 aa7.15□□□□□ -1.26
PLD3-201ENST00000356508 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
PLD3-201ENST00000356508 KRTAP9-8Q9BYQ0 159 aa7.11□□□□□ -1.27
PLD3-201ENST00000356508 MT2AP02795 61 aa7.08□□□□□ -1.28
PLD3-201ENST00000356508 KRTAP10-10P60014 251 aa7.08□□□□□ -1.28
PLD3-201ENST00000356508 R4GN34 69 aa7.05□□□□□ -1.28
PLD3-201ENST00000356508 MT1FP04733 61 aa7.02□□□□□ -1.29
PLD3-201ENST00000356508 CAMK2N1Q7Z7J9 78 aa7.02□□□□□ -1.29
PLD3-201ENST00000356508 SPRR5A0A1B0GTR4 108 aa6.94□□□□□ -1.3
PLD3-201ENST00000356508 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
PLD3-201ENST00000356508 SPRR2GQ9BYE4 73 aa6.86□□□□□ -1.31
PLD3-201ENST00000356508 KRTAP9-3Q9BYQ3 159 aa6.86□□□□□ -1.31
PLD3-201ENST00000356508 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.32
PLD3-201ENST00000356508 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
PLD3-201ENST00000356508 INE1O15225 51 aa6.71□□□□□ -1.34
PLD3-201ENST00000356508 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
PLD3-201ENST00000356508 LCE2BO14633 110 aa6.68□□□□□ -1.34
PLD3-201ENST00000356508 LCE2DQ5TA82 110 aaPredicted RBP6.68□□□□□ -1.34
PLD3-201ENST00000356508 MT1BP07438 61 aa6.6□□□□□ -1.35
PLD3-201ENST00000356508 TNP1P09430 55 aa6.56□□□□□ -1.36
PLD3-201ENST00000356508 KRTAP9-2Q9BYQ4 174 aa6.52□□□□□ -1.37
PLD3-201ENST00000356508 USH2AO75445 5202 aa6.46□□□□□ -1.38
PLD3-201ENST00000356508 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
PLD3-201ENST00000356508 MT1XP80297 61 aa6.35□□□□□ -1.39
PLD3-201ENST00000356508 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
PLD3-201ENST00000356508 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
PLD3-201ENST00000356508 CRCT1Q9UGL9 99 aa6.27□□□□□ -1.41
PLD3-201ENST00000356508 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
PLD3-201ENST00000356508 KRTAP9-6A0A140TA67 174 aa6.09□□□□□ -1.44
PLD3-201ENST00000356508 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.44
PLD3-201ENST00000356508 LCE3AQ5TA76 89 aa6.08□□□□□ -1.44
PLD3-201ENST00000356508 FCGBPQ9Y6R7 5405 aaPredicted RBP6.07□□□□□ -1.44
PLD3-201ENST00000356508 KRTAP10-12P60413 245 aa6.04□□□□□ -1.44
PLD3-201ENST00000356508 KRTAP8-1Q8IUC2 63 aa6.04□□□□□ -1.44
PLD3-201ENST00000356508 KRTAP4-8A0A0G2JLE6 195 aa5.89□□□□□ -1.47
PLD3-201ENST00000356508 KRTAP4-8Q9BYQ9 185 aa5.89□□□□□ -1.47
PLD3-201ENST00000356508 MACF1Q9UPN3 7388 aaKnown RBP5.82□□□□□ -1.48
PLD3-201ENST00000356508 KMT2DO14686 5537 aa5.8□□□□□ -1.48
PLD3-201ENST00000356508 KRTAP12-3P60328 96 aa5.8□□□□□ -1.48
PLD3-201ENST00000356508 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
PLD3-201ENST00000356508 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
PLD3-201ENST00000356508 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
PLD3-201ENST00000356508 SPRR2FQ96RM1 72 aa5.66□□□□□ -1.5
PLD3-201ENST00000356508 SYNE2Q8WXH0 6885 aaKnown RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms