RNA–Protein interactions for RNA: ENST00000356508.9

PLD3-201, Transcript of phospholipase D family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLD3, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-201ENST00000356508 NISCHQ9Y2I1 1504 aa35.3■■■■□ 3.24
PLD3-201ENST00000356508 CCDC180Q9P1Z9 1646 aa30.94■■■□□ 2.54
PLD3-201ENST00000356508 ABCC9O60706 1549 aa29.64■■■□□ 2.33
PLD3-201ENST00000356508 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
PLD3-201ENST00000356508 DCAF8L2P0C7V8 631 aa29.41■■■□□ 2.3
PLD3-201ENST00000356508 DCAF1Q9Y4B6 1507 aa29.21■■■□□ 2.27
PLD3-201ENST00000356508 MYO15BQ96JP2 1530 aa29.02■■■□□ 2.24
PLD3-201ENST00000356508 NACADO15069 1562 aa28.96■■■□□ 2.23
PLD3-201ENST00000356508 RB1CC1Q8TDY2 1594 aa28.81■■■□□ 2.2
PLD3-201ENST00000356508 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
PLD3-201ENST00000356508 SCRIBQ14160 1630 aa28.38■■■□□ 2.13
PLD3-201ENST00000356508 UNC13AQ9UPW8 1703 aa28.05■■■□□ 2.08
PLD3-201ENST00000356508 PABPN1Q86U42 306 aaKnown RBP eCLIP27.9■■■□□ 2.06
PLD3-201ENST00000356508 BICRAQ9NZM4 1560 aa27.84■■■□□ 2.05
PLD3-201ENST00000356508 CECR2Q9BXF3 1484 aa27.42■■□□□ 1.98
PLD3-201ENST00000356508 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
PLD3-201ENST00000356508 BAZ1AQ9NRL2 1556 aaPredicted RBP27.32■■□□□ 1.96
PLD3-201ENST00000356508 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
PLD3-201ENST00000356508 MROH2BQ7Z745 1585 aa27.22■■□□□ 1.95
PLD3-201ENST00000356508 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
PLD3-201ENST00000356508 EIF4G1Q04637 1599 aaKnown RBP27.09■■□□□ 1.93
PLD3-201ENST00000356508 WIZO95785 1651 aa26.96■■□□□ 1.91
PLD3-201ENST00000356508 SMARCA2P51531 1590 aa26.88■■□□□ 1.89
PLD3-201ENST00000356508 ATAD2BQ9ULI0 1458 aa26.88■■□□□ 1.89
PLD3-201ENST00000356508 PEG3Q9GZU2 1588 aa26.88■■□□□ 1.89
PLD3-201ENST00000356508 CC2D2AQ9P2K1 1620 aa26.78■■□□□ 1.88
PLD3-201ENST00000356508 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
PLD3-201ENST00000356508 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
PLD3-201ENST00000356508 TOP2AP11388 1531 aaKnown RBP26.72■■□□□ 1.87
PLD3-201ENST00000356508 HMGXB3Q12766 1538 aa26.64■■□□□ 1.86
PLD3-201ENST00000356508 DNAJC5BQ9UF47 199 aa26.45■■□□□ 1.83
PLD3-201ENST00000356508 CCDC88BA6NC98 1476 aa26.45■■□□□ 1.82
PLD3-201ENST00000356508 CADPSQ9ULU8 1353 aa26.05■■□□□ 1.76
PLD3-201ENST00000356508 CFTRP13569 1480 aa26.02■■□□□ 1.76
PLD3-201ENST00000356508 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
PLD3-201ENST00000356508 LAMC3Q9Y6N6 1575 aa25.89■■□□□ 1.73
PLD3-201ENST00000356508 NESP48681 1621 aa25.85■■□□□ 1.73
PLD3-201ENST00000356508 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
PLD3-201ENST00000356508 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
PLD3-201ENST00000356508 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
PLD3-201ENST00000356508 FANCD2Q9BXW9 1451 aa25.74■■□□□ 1.71
PLD3-201ENST00000356508 ABCC8Q09428 1581 aa25.72■■□□□ 1.71
PLD3-201ENST00000356508 WRNQ14191 1432 aaPredicted RBP eCLIP25.7■■□□□ 1.7
PLD3-201ENST00000356508 CEP164Q9UPV0 1460 aa25.63■■□□□ 1.69
PLD3-201ENST00000356508 PELP1Q8IZL8 1130 aaKnown RBP25.54■■□□□ 1.68
PLD3-201ENST00000356508 ERCC6Q03468 1493 aa25.52■■□□□ 1.68
PLD3-201ENST00000356508 KIF21AQ7Z4S6 1674 aa25.5■■□□□ 1.67
PLD3-201ENST00000356508 SYNJ1O43426 1573 aa25.5■■□□□ 1.67
PLD3-201ENST00000356508 CUX1P39880 1505 aa25.48■■□□□ 1.67
PLD3-201ENST00000356508 TOP2BQ02880 1626 aa25.47■■□□□ 1.67
PLD3-201ENST00000356508 BIVM-ERCC5R4GMW8 1640 aa25.43■■□□□ 1.66
PLD3-201ENST00000356508 DNMBPQ6XZF7 1577 aa25.41■■□□□ 1.66
PLD3-201ENST00000356508 MRC2Q9UBG0 1479 aa25.4■■□□□ 1.66
PLD3-201ENST00000356508 TOPBP1Q92547 1522 aa25.38■■□□□ 1.65
PLD3-201ENST00000356508 URB2Q14146 1524 aaKnown RBP25.38■■□□□ 1.65
PLD3-201ENST00000356508 HRCP23327 699 aa25.35■■□□□ 1.65
PLD3-201ENST00000356508 FGD5Q6ZNL6 1462 aa25.3■■□□□ 1.64
PLD3-201ENST00000356508 FAM9AQ8IZU1 332 aaPredicted RBP25.24■■□□□ 1.63
PLD3-201ENST00000356508 WDR62O43379 1518 aa25.23■■□□□ 1.63
PLD3-201ENST00000356508 POLA1P09884 1462 aaPredicted RBP25.23■■□□□ 1.63
PLD3-201ENST00000356508 SOGA1O94964 1423 aa25.21■■□□□ 1.63
PLD3-201ENST00000356508 THOC2Q8NI27 1593 aaKnown RBP25.2■■□□□ 1.62
PLD3-201ENST00000356508 EEA1Q15075 1411 aa25.17■■□□□ 1.62
PLD3-201ENST00000356508 RAD54L2Q9Y4B4 1467 aa25.14■■□□□ 1.62
PLD3-201ENST00000356508 KIF27Q86VH2 1401 aa25.12■■□□□ 1.61
PLD3-201ENST00000356508 CUX2O14529 1486 aa25.09■■□□□ 1.61
PLD3-201ENST00000356508 RUSC2Q8N2Y8 1516 aa25.09■■□□□ 1.61
PLD3-201ENST00000356508 CSRNP3Q8WYN3 585 aa25.08■■□□□ 1.6
PLD3-201ENST00000356508 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
PLD3-201ENST00000356508 IFT140Q96RY7 1462 aa25.04■■□□□ 1.6
PLD3-201ENST00000356508 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
PLD3-201ENST00000356508 TDRD9Q8NDG6 1382 aaKnown RBP24.98■■□□□ 1.59
PLD3-201ENST00000356508 WDR97A6NE52 1622 aa24.93■■□□□ 1.58
PLD3-201ENST00000356508 GAPVD1Q14C86 1478 aa24.91■■□□□ 1.58
PLD3-201ENST00000356508 LOC105371045A0A1W2PR82 267 aa24.9■■□□□ 1.58
PLD3-201ENST00000356508 IGF1RP08069 1367 aa24.89■■□□□ 1.58
PLD3-201ENST00000356508 EHMT2Q96KQ7 1210 aa24.88■■□□□ 1.57
PLD3-201ENST00000356508 AQRO60306 1485 aaKnown RBP eCLIP24.86■■□□□ 1.574e-8■■■■■ 31.9
PLD3-201ENST00000356508 MYT1Q01538 1121 aa24.85■■□□□ 1.57
PLD3-201ENST00000356508 ZNF608Q9ULD9 1512 aaPredicted RBP24.85■■□□□ 1.57
PLD3-201ENST00000356508 ABCA5Q8WWZ7 1642 aa24.85■■□□□ 1.57
PLD3-201ENST00000356508 ERICH3Q5RHP9 1530 aa24.79■■□□□ 1.56
PLD3-201ENST00000356508 CARMIL1Q5VZK9 1371 aa24.79■■□□□ 1.56
PLD3-201ENST00000356508 GRIN2BQ13224 1484 aa24.78■■□□□ 1.56
PLD3-201ENST00000356508 PRXQ9BXM0 1461 aa24.77■■□□□ 1.56
PLD3-201ENST00000356508 KIF21BO75037 1637 aa24.76■■□□□ 1.55
PLD3-201ENST00000356508 GOLGA3Q08378 1498 aa24.76■■□□□ 1.55
PLD3-201ENST00000356508 UBTFP17480 764 aaKnown RBP24.76■■□□□ 1.55
PLD3-201ENST00000356508 EIF4G3O43432 1585 aaKnown RBP24.74■■□□□ 1.55
PLD3-201ENST00000356508 RAPGEF2Q9Y4G8 1499 aa24.7■■□□□ 1.55
PLD3-201ENST00000356508 CUL7Q14999 1698 aa24.7■■□□□ 1.55
PLD3-201ENST00000356508 PBRM1Q86U86 1689 aa24.69■■□□□ 1.54
PLD3-201ENST00000356508 FHAD1B1AJZ9 1412 aa24.64■■□□□ 1.54
PLD3-201ENST00000356508 SNAPC4Q5SXM2 1469 aa24.62■■□□□ 1.53
PLD3-201ENST00000356508 TNIKQ9UKE5 1360 aa24.62■■□□□ 1.53
PLD3-201ENST00000356508 MAGI1Q96QZ7 1491 aaPredicted RBP24.61■■□□□ 1.53
PLD3-201ENST00000356508 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
PLD3-201ENST00000356508 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
PLD3-201ENST00000356508 FBLN2P98095 1184 aa24.53■■□□□ 1.52
PLD3-201ENST00000356508 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms