RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 H1FX-AS1Q4G0G2 97 aa11.25□□□□□ -0.61
LIMS2-202ENST00000355119 H0YAA0 97 aa11.21□□□□□ -0.61
LIMS2-202ENST00000355119 RBM12B-AS1Q9P1G2 102 aa11.16□□□□□ -0.62
LIMS2-202ENST00000355119 DMBT1Q9UGM3 2413 aaPredicted RBP11.15□□□□□ -0.62
LIMS2-202ENST00000355119 KIAA1109Q2LD37 5005 aa11.14□□□□□ -0.63
LIMS2-202ENST00000355119 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
LIMS2-202ENST00000355119 S4R3F8 94 aa11.1□□□□□ -0.63
LIMS2-202ENST00000355119 TPRXLQ17RH7 258 aa11.08□□□□□ -0.64
LIMS2-202ENST00000355119 PRAC1Q96KF2 57 aa11.04□□□□□ -0.64
LIMS2-202ENST00000355119 ADM2Q7Z4H4 148 aa11.03□□□□□ -0.64
LIMS2-202ENST00000355119 KRTAP10-6P60371 365 aaPredicted RBP10.96□□□□□ -0.65
LIMS2-202ENST00000355119 BIRC6Q9NR09 4857 aa10.95□□□□□ -0.66
LIMS2-202ENST00000355119 MYCBP2O75592 4640 aa10.93□□□□□ -0.66
LIMS2-202ENST00000355119 KRTAP3-2Q9BYR7 98 aa10.92□□□□□ -0.66
LIMS2-202ENST00000355119 K7ERS5 55 aa10.9□□□□□ -0.66
LIMS2-202ENST00000355119 KRTAP4-5Q9BYR2 181 aa10.85□□□□□ -0.67
LIMS2-202ENST00000355119 CSAG1Q6PB30 78 aa10.79□□□□□ -0.68
LIMS2-202ENST00000355119 KRTAP13-4Q3LI77 160 aa10.77□□□□□ -0.68
LIMS2-202ENST00000355119 P0C880 135 aa10.75□□□□□ -0.69
LIMS2-202ENST00000355119 HERC2O95714 4834 aa10.75□□□□□ -0.69
LIMS2-202ENST00000355119 SEC61BP60468 96 aaKnown RBP10.69□□□□□ -0.7
LIMS2-202ENST00000355119 ABCA13Q86UQ4 5058 aa10.69□□□□□ -0.7
LIMS2-202ENST00000355119 A0A0D9SG42 100 aa10.67□□□□□ -0.7
LIMS2-202ENST00000355119 LRP2P98164 4655 aa10.66□□□□□ -0.7
LIMS2-202ENST00000355119 LINC01554Q52M75 96 aa10.66□□□□□ -0.7
LIMS2-202ENST00000355119 J3QL48 77 aa10.63□□□□□ -0.71
LIMS2-202ENST00000355119 LPAP08519 4548 aa10.59□□□□□ -0.71
LIMS2-202ENST00000355119 KRTAP25-1Q3LHN0 102 aa10.58□□□□□ -0.72
LIMS2-202ENST00000355119 ROMO1P60602 79 aa10.58□□□□□ -0.72
LIMS2-202ENST00000355119 PCLOQ9Y6V0 5065 aa10.56□□□□□ -0.72
LIMS2-202ENST00000355119 M0QZ58 72 aa10.52□□□□□ -0.73
LIMS2-202ENST00000355119 KRTAP12-2P59991 146 aa10.43□□□□□ -0.74
LIMS2-202ENST00000355119 KRTAP4-1Q9BYQ7 146 aa10.42□□□□□ -0.74
LIMS2-202ENST00000355119 KRTAP12-1P59990 96 aa10.41□□□□□ -0.74
LIMS2-202ENST00000355119 SPINT4Q6UDR6 99 aa10.36□□□□□ -0.75
LIMS2-202ENST00000355119 CRIPTQ9P021 101 aa10.36□□□□□ -0.75
LIMS2-202ENST00000355119 MUC17Q685J3 4493 aa10.35□□□□□ -0.75
LIMS2-202ENST00000355119 R4GN34 69 aa10.26□□□□□ -0.77
LIMS2-202ENST00000355119 KRTAP19-2Q3LHN2 52 aa10.25□□□□□ -0.77
LIMS2-202ENST00000355119 HERC1Q15751 4861 aa10.22□□□□□ -0.77
LIMS2-202ENST00000355119 LORP23490 312 aaPredicted RBP10.1□□□□□ -0.79
LIMS2-202ENST00000355119 C10orf95Q9H7T3 257 aa10.07□□□□□ -0.8
LIMS2-202ENST00000355119 HMCN2Q8NDA2 5059 aa9.88□□□□□ -0.83
LIMS2-202ENST00000355119 FLGP20930 4061 aaPredicted RBP9.81□□□□□ -0.84
LIMS2-202ENST00000355119 LCE2CQ5TA81 110 aa9.72□□□□□ -0.85
LIMS2-202ENST00000355119 CAMK2N1Q7Z7J9 78 aa9.72□□□□□ -0.85
LIMS2-202ENST00000355119 UBR4Q5T4S7 5183 aa9.63□□□□□ -0.87
LIMS2-202ENST00000355119 MUC2Q02817 5179 aa9.62□□□□□ -0.87
LIMS2-202ENST00000355119 KRTAP15-1Q3LI76 137 aa9.57□□□□□ -0.88
LIMS2-202ENST00000355119 RNF213Q63HN8 5207 aa9.5□□□□□ -0.89
LIMS2-202ENST00000355119 PP632Q6XCG6 107 aa9.49□□□□□ -0.89
LIMS2-202ENST00000355119 M0R2T5 61 aa9.48□□□□□ -0.89
LIMS2-202ENST00000355119 MT1HP80294 61 aa9.47□□□□□ -0.89
LIMS2-202ENST00000355119 SPRR2GQ9BYE4 73 aa9.46□□□□□ -0.9
LIMS2-202ENST00000355119 KRTAP19-1Q8IUB9 90 aa9.37□□□□□ -0.91
LIMS2-202ENST00000355119 TNP1P09430 55 aa9.36□□□□□ -0.91
LIMS2-202ENST00000355119 PLAC4Q8WY50 150 aa9.35□□□□□ -0.91
LIMS2-202ENST00000355119 H3BS24 57 aa9.33□□□□□ -0.92
LIMS2-202ENST00000355119 MT2AP02795 61 aa9.29□□□□□ -0.92
LIMS2-202ENST00000355119 KRTAP23-1A1A580 65 aa9.27□□□□□ -0.92
LIMS2-202ENST00000355119 MT1FP04733 61 aa9.26□□□□□ -0.93
LIMS2-202ENST00000355119 KRTAP10-10P60014 251 aa9.26□□□□□ -0.93
LIMS2-202ENST00000355119 KRTAP9-8Q9BYQ0 159 aa9.22□□□□□ -0.93
LIMS2-202ENST00000355119 FAT4Q6V0I7 4981 aa9.21□□□□□ -0.93
LIMS2-202ENST00000355119 NDUFAF8A1L188 74 aa9.19□□□□□ -0.94
LIMS2-202ENST00000355119 KRTAP19-8Q3LI54 63 aa9.1□□□□□ -0.95
LIMS2-202ENST00000355119 MT1BP07438 61 aa8.93□□□□□ -0.98
LIMS2-202ENST00000355119 KRTAP9-3Q9BYQ3 159 aa8.87□□□□□ -0.99
LIMS2-202ENST00000355119 LCE3AQ5TA76 89 aa8.83□□□□□ -1
LIMS2-202ENST00000355119 LUZP6Q538Z0 58 aa8.83□□□□□ -1
LIMS2-202ENST00000355119 KRTAP10-5P60370 271 aa8.81□□□□□ -1
LIMS2-202ENST00000355119 MT1XP80297 61 aa8.81□□□□□ -1
LIMS2-202ENST00000355119 SPRR5A0A1B0GTR4 108 aa8.73□□□□□ -1.01
LIMS2-202ENST00000355119 KRTAP8-1Q8IUC2 63 aa8.67□□□□□ -1.02
LIMS2-202ENST00000355119 LCE2AQ5TA79 106 aaPredicted RBP8.66□□□□□ -1.02
LIMS2-202ENST00000355119 PRO2289Q9P1D8 64 aa8.61□□□□□ -1.03
LIMS2-202ENST00000355119 KRTAP10-12P60413 245 aa8.6□□□□□ -1.03
LIMS2-202ENST00000355119 KRTAP10-7P60409 375 aaPredicted RBP8.51□□□□□ -1.05
LIMS2-202ENST00000355119 LCE2BO14633 110 aa8.49□□□□□ -1.05
LIMS2-202ENST00000355119 KRTAP12-3P60328 96 aa8.45□□□□□ -1.06
LIMS2-202ENST00000355119 A0A0A0MQY5 61 aa8.23□□□□□ -1.09
LIMS2-202ENST00000355119 KRTAP19-5Q3LI72 72 aa8.15□□□□□ -1.11
LIMS2-202ENST00000355119 FSIP2Q5CZC0 6907 aa8.09□□□□□ -1.12
LIMS2-202ENST00000355119 USH2AO75445 5202 aa8.02□□□□□ -1.13
LIMS2-202ENST00000355119 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
LIMS2-202ENST00000355119 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
LIMS2-202ENST00000355119 LCE3CQ5T5A8 94 aa7.95□□□□□ -1.14
LIMS2-202ENST00000355119 LCE2DQ5TA82 110 aaPredicted RBP7.9□□□□□ -1.15
LIMS2-202ENST00000355119 KRTAP9-2Q9BYQ4 174 aa7.9□□□□□ -1.15
LIMS2-202ENST00000355119 KRTAP19-7Q3SYF9 63 aa7.84□□□□□ -1.15
LIMS2-202ENST00000355119 KRTAP19-6Q3LI70 58 aa7.78□□□□□ -1.16
LIMS2-202ENST00000355119 SSPOA2VEC9 5147 aa7.77□□□□□ -1.17
LIMS2-202ENST00000355119 KRTAP19-4Q3LI73 84 aa7.76□□□□□ -1.17
LIMS2-202ENST00000355119 KMT2DO14686 5537 aa7.7□□□□□ -1.18
LIMS2-202ENST00000355119 MT1EP04732 61 aa7.66□□□□□ -1.18
LIMS2-202ENST00000355119 MT1LQ93083 61 aa7.62□□□□□ -1.19
LIMS2-202ENST00000355119 KRTAP9-6A8MVA2 160 aa7.56□□□□□ -1.2
LIMS2-202ENST00000355119 INE1O15225 51 aa7.54□□□□□ -1.2
LIMS2-202ENST00000355119 KRTAP4-7Q9BYR0 210 aa7.52□□□□□ -1.2
LIMS2-202ENST00000355119 CRCT1Q9UGL9 99 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 251 ms