RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 LCA10Q71F78 164 aa9.84□□□□□ -0.83
SIGMAR1-202ENST00000353468 MT1HP80294 61 aa9.82□□□□□ -0.84
SIGMAR1-202ENST00000353468 COA5Q86WW8 74 aa9.82□□□□□ -0.84
SIGMAR1-202ENST00000353468 CHKB-CPT1BH3BT56 60 aa9.8□□□□□ -0.84
SIGMAR1-202ENST00000353468 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
SIGMAR1-202ENST00000353468 M0R2T5 61 aa9.71□□□□□ -0.85
SIGMAR1-202ENST00000353468 CSAG1Q6PB30 78 aa9.71□□□□□ -0.86
SIGMAR1-202ENST00000353468 SERP1Q9Y6X1 66 aa9.69□□□□□ -0.86
SIGMAR1-202ENST00000353468 SPTSSBQ8NFR3 76 aa9.67□□□□□ -0.86
SIGMAR1-202ENST00000353468 LCE2AQ5TA79 106 aaPredicted RBP9.65□□□□□ -0.86
SIGMAR1-202ENST00000353468 RPS28P62857 69 aaKnown RBP9.53□□□□□ -0.88
SIGMAR1-202ENST00000353468 KRTAP10-6P60371 365 aaPredicted RBP9.5□□□□□ -0.89
SIGMAR1-202ENST00000353468 LORP23490 312 aaPredicted RBP9.46□□□□□ -0.9
SIGMAR1-202ENST00000353468 H0YAA0 97 aa9.44□□□□□ -0.9
SIGMAR1-202ENST00000353468 KRTAP9-8Q9BYQ0 159 aa9.42□□□□□ -0.9
SIGMAR1-202ENST00000353468 ADM2Q7Z4H4 148 aa9.4□□□□□ -0.9
SIGMAR1-202ENST00000353468 SMIM26A0A096LP01 95 aa9.39□□□□□ -0.91
SIGMAR1-202ENST00000353468 MT2AP02795 61 aa9.35□□□□□ -0.91
SIGMAR1-202ENST00000353468 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
SIGMAR1-202ENST00000353468 LINC01558Q9Y6Z2 57 aa9.35□□□□□ -0.91
SIGMAR1-202ENST00000353468 SEC61GP60059 68 aa9.33□□□□□ -0.92
SIGMAR1-202ENST00000353468 A0A1B0GU69 56 aa9.3□□□□□ -0.92
SIGMAR1-202ENST00000353468 P0C880 135 aa9.3□□□□□ -0.92
SIGMAR1-202ENST00000353468 MT1FP04733 61 aa9.29□□□□□ -0.92
SIGMAR1-202ENST00000353468 KRTAP10-10P60014 251 aa9.29□□□□□ -0.92
SIGMAR1-202ENST00000353468 Q1T7F1 81 aa9.29□□□□□ -0.92
SIGMAR1-202ENST00000353468 V9GYY9 64 aa9.29□□□□□ -0.92
SIGMAR1-202ENST00000353468 PRR15LQ9BU68 103 aa9.23□□□□□ -0.93
SIGMAR1-202ENST00000353468 CRIPTQ9P021 101 aa9.15□□□□□ -0.95
SIGMAR1-202ENST00000353468 PSPHP1O15172 72 aa9.14□□□□□ -0.95
SIGMAR1-202ENST00000353468 A0A1B0GU33 70 aa9.11□□□□□ -0.95
SIGMAR1-202ENST00000353468 KRTAP9-3Q9BYQ3 159 aa9.09□□□□□ -0.95
SIGMAR1-202ENST00000353468 R4GN34 69 aa9.09□□□□□ -0.95
SIGMAR1-202ENST00000353468 M0QZ58 72 aa9.06□□□□□ -0.96
SIGMAR1-202ENST00000353468 Q5VV11 94 aa9.06□□□□□ -0.96
SIGMAR1-202ENST00000353468 KRTAP19-1Q8IUB9 90 aa9.03□□□□□ -0.96
SIGMAR1-202ENST00000353468 SPRR2GQ9BYE4 73 aa9.03□□□□□ -0.96
SIGMAR1-202ENST00000353468 KRTAP13-4Q3LI77 160 aa9.01□□□□□ -0.97
SIGMAR1-202ENST00000353468 SPATA8Q6RVD6 105 aa8.98□□□□□ -0.97
SIGMAR1-202ENST00000353468 UQCR11O14957 56 aa8.96□□□□□ -0.97
SIGMAR1-202ENST00000353468 LINC01554Q52M75 96 aa8.9□□□□□ -0.98
SIGMAR1-202ENST00000353468 LCE2DQ5TA82 110 aaPredicted RBP8.89□□□□□ -0.99
SIGMAR1-202ENST00000353468 LCE2BO14633 110 aa8.88□□□□□ -0.99
SIGMAR1-202ENST00000353468 A6NED7 52 aa8.86□□□□□ -0.99
SIGMAR1-202ENST00000353468 MIR22HGQ0VDD5 57 aa8.84□□□□□ -0.99
SIGMAR1-202ENST00000353468 KRTAP19-8Q3LI54 63 aa8.84□□□□□ -0.99
SIGMAR1-202ENST00000353468 A0A0D9SG42 100 aa8.82□□□□□ -1
SIGMAR1-202ENST00000353468 A8MU10 97 aa8.8□□□□□ -1
SIGMAR1-202ENST00000353468 MT1BP07438 61 aa8.74□□□□□ -1.01
SIGMAR1-202ENST00000353468 A6NN06 94 aa8.73□□□□□ -1.01
SIGMAR1-202ENST00000353468 KRTAP9-2Q9BYQ4 174 aa8.69□□□□□ -1.02
SIGMAR1-202ENST00000353468 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
SIGMAR1-202ENST00000353468 KRTAP12-1P59990 96 aa8.65□□□□□ -1.02
SIGMAR1-202ENST00000353468 SPINT4Q6UDR6 99 aa8.65□□□□□ -1.02
SIGMAR1-202ENST00000353468 CDC42SE1Q9NRR8 79 aa8.65□□□□□ -1.02
SIGMAR1-202ENST00000353468 USH2AO75445 5202 aa8.65□□□□□ -1.03
SIGMAR1-202ENST00000353468 KRTAP12-2P59991 146 aa8.61□□□□□ -1.03
SIGMAR1-202ENST00000353468 BRK1Q8WUW1 75 aa8.53□□□□□ -1.04
SIGMAR1-202ENST00000353468 K7ERS5 55 aa8.5□□□□□ -1.05
SIGMAR1-202ENST00000353468 CAMK2N1Q7Z7J9 78 aa8.48□□□□□ -1.05
SIGMAR1-202ENST00000353468 FSIP2Q5CZC0 6907 aa8.44□□□□□ -1.06
SIGMAR1-202ENST00000353468 SSPOA2VEC9 5147 aa8.43□□□□□ -1.06
SIGMAR1-202ENST00000353468 KRTAP19-6Q3LI70 58 aa8.42□□□□□ -1.06
SIGMAR1-202ENST00000353468 MT1XP80297 61 aa8.39□□□□□ -1.07
SIGMAR1-202ENST00000353468 KRTAP10-5P60370 271 aa8.36□□□□□ -1.07
SIGMAR1-202ENST00000353468 PRO2289Q9P1D8 64 aa8.35□□□□□ -1.07
SIGMAR1-202ENST00000353468 CRCT1Q9UGL9 99 aa8.34□□□□□ -1.07
SIGMAR1-202ENST00000353468 C10orf95Q9H7T3 257 aa8.21□□□□□ -1.1
SIGMAR1-202ENST00000353468 PRO0628Q9UI54 55 aa8.18□□□□□ -1.1
SIGMAR1-202ENST00000353468 FCGBPQ9Y6R7 5405 aaPredicted RBP8.14□□□□□ -1.11
SIGMAR1-202ENST00000353468 KRTAP9-6A0A140TA67 174 aa8.12□□□□□ -1.11
SIGMAR1-202ENST00000353468 ROMO1P60602 79 aa8.09□□□□□ -1.11
SIGMAR1-202ENST00000353468 PMAIP1Q13794 54 aa8.07□□□□□ -1.12
SIGMAR1-202ENST00000353468 KRTAP10-7P60409 375 aaPredicted RBP8.04□□□□□ -1.12
SIGMAR1-202ENST00000353468 TNP1P09430 55 aa8.03□□□□□ -1.12
SIGMAR1-202ENST00000353468 KRTAP10-12P60413 245 aa7.97□□□□□ -1.13
SIGMAR1-202ENST00000353468 KRTAP25-1Q3LHN0 102 aa7.94□□□□□ -1.14
SIGMAR1-202ENST00000353468 KRTAP4-8A0A0G2JLE6 195 aa7.8□□□□□ -1.16
SIGMAR1-202ENST00000353468 KRTAP4-8Q9BYQ9 185 aa7.8□□□□□ -1.16
SIGMAR1-202ENST00000353468 MACF1Q9UPN3 7388 aaKnown RBP7.78□□□□□ -1.16
SIGMAR1-202ENST00000353468 KMT2DO14686 5537 aa7.77□□□□□ -1.17
SIGMAR1-202ENST00000353468 LCE3AQ5TA76 89 aa7.73□□□□□ -1.17
SIGMAR1-202ENST00000353468 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.72□□□□□ -1.17
SIGMAR1-202ENST00000353468 KRTAP23-1A1A580 65 aa7.68□□□□□ -1.18
SIGMAR1-202ENST00000353468 KRTAP8-1Q8IUC2 63 aa7.67□□□□□ -1.18
SIGMAR1-202ENST00000353468 KTN1-AS1Q86SY8 53 aa7.62□□□□□ -1.19
SIGMAR1-202ENST00000353468 PP632Q6XCG6 107 aa7.61□□□□□ -1.19
SIGMAR1-202ENST00000353468 PRAC1Q96KF2 57 aa7.58□□□□□ -1.2
SIGMAR1-202ENST00000353468 KRTAP19-5Q3LI72 72 aa7.51□□□□□ -1.21
SIGMAR1-202ENST00000353468 SYNE2Q8WXH0 6885 aaKnown RBP7.51□□□□□ -1.21
SIGMAR1-202ENST00000353468 KRTAP19-7Q3SYF9 63 aa7.48□□□□□ -1.21
SIGMAR1-202ENST00000353468 KRTAP6-3Q3LI67 103 aa7.47□□□□□ -1.21
SIGMAR1-202ENST00000353468 KRTAP5-9P26371 169 aa7.46□□□□□ -1.22
SIGMAR1-202ENST00000353468 SPRR2FQ96RM1 72 aa7.45□□□□□ -1.22
SIGMAR1-202ENST00000353468 KRTAP12-3P60328 96 aa7.43□□□□□ -1.22
SIGMAR1-202ENST00000353468 KRTAP9-7A8MTY7 169 aa7.41□□□□□ -1.22
SIGMAR1-202ENST00000353468 MT1EP04732 61 aa7.37□□□□□ -1.23
SIGMAR1-202ENST00000353468 MUC12Q9UKN1 5478 aa7.28□□□□□ -1.24
SIGMAR1-202ENST00000353468 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.25
SIGMAR1-202ENST00000353468 SVIPQ8NHG7 77 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms