RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 RYR1P21817 5038 aa5.51□□□□□ -1.53
SMPD4-201ENST00000351288 LPAP08519 4548 aa5.51□□□□□ -1.53
SMPD4-201ENST00000351288 TNXBP22105 4242 aa5.5□□□□□ -1.53
SMPD4-201ENST00000351288 K7ERS5 55 aa5.5□□□□□ -1.53
SMPD4-201ENST00000351288 SPATA8Q6RVD6 105 aa5.5□□□□□ -1.53
SMPD4-201ENST00000351288 XP32Q5T750 250 aa5.49□□□□□ -1.53
SMPD4-201ENST00000351288 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
SMPD4-201ENST00000351288 A0A1B0GU33 70 aa5.48□□□□□ -1.53
SMPD4-201ENST00000351288 KRTAP4-5Q9BYR2 181 aa5.48□□□□□ -1.53
SMPD4-201ENST00000351288 KRTAP17-1Q9BYP8 105 aa5.47□□□□□ -1.53
SMPD4-201ENST00000351288 RPL37P61927 97 aaKnown RBP5.46□□□□□ -1.54
SMPD4-201ENST00000351288 LRP2P98164 4655 aa5.45□□□□□ -1.54
SMPD4-201ENST00000351288 S4R3F8 94 aa5.44□□□□□ -1.54
SMPD4-201ENST00000351288 CRIPTQ9P021 101 aa5.44□□□□□ -1.54
SMPD4-201ENST00000351288 EPPK1P58107 5090 aaKnown RBP5.43□□□□□ -1.54
SMPD4-201ENST00000351288 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
SMPD4-201ENST00000351288 H0YAA0 97 aa5.41□□□□□ -1.54
SMPD4-201ENST00000351288 ABCA13Q86UQ4 5058 aa5.39□□□□□ -1.55
SMPD4-201ENST00000351288 MT1HL1P0DM35 61 aa5.36□□□□□ -1.55
SMPD4-201ENST00000351288 CSAG1Q6PB30 78 aa5.36□□□□□ -1.55
SMPD4-201ENST00000351288 SEC61BP60468 96 aaKnown RBP5.33□□□□□ -1.56
SMPD4-201ENST00000351288 H1FX-AS1Q4G0G2 97 aa5.33□□□□□ -1.56
SMPD4-201ENST00000351288 M0R2T5 61 aa5.26□□□□□ -1.57
SMPD4-201ENST00000351288 KRTAP3-3Q9BYR6 98 aa5.26□□□□□ -1.57
SMPD4-201ENST00000351288 P0C880 135 aa5.25□□□□□ -1.57
SMPD4-201ENST00000351288 KRTAP13-4Q3LI77 160 aa5.25□□□□□ -1.57
SMPD4-201ENST00000351288 TPRXLQ17RH7 258 aa5.24□□□□□ -1.57
SMPD4-201ENST00000351288 R4GN34 69 aa5.24□□□□□ -1.57
SMPD4-201ENST00000351288 MUC2Q02817 5179 aa5.24□□□□□ -1.57
SMPD4-201ENST00000351288 M0QZ58 72 aa5.23□□□□□ -1.57
SMPD4-201ENST00000351288 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
SMPD4-201ENST00000351288 HERC2O95714 4834 aa5.16□□□□□ -1.58
SMPD4-201ENST00000351288 KRTAP3-2Q9BYR7 98 aa5.16□□□□□ -1.58
SMPD4-201ENST00000351288 CAMK2N1Q7Z7J9 78 aa5.11□□□□□ -1.59
SMPD4-201ENST00000351288 C10orf95Q9H7T3 257 aa5.1□□□□□ -1.59
SMPD4-201ENST00000351288 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
SMPD4-201ENST00000351288 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
SMPD4-201ENST00000351288 ROMO1P60602 79 aa5.04□□□□□ -1.6
SMPD4-201ENST00000351288 HERC1Q15751 4861 aa5.03□□□□□ -1.6
SMPD4-201ENST00000351288 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
SMPD4-201ENST00000351288 KRTAP4-1Q9BYQ7 146 aa4.99□□□□□ -1.61
SMPD4-201ENST00000351288 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
SMPD4-201ENST00000351288 KRTAP12-1P59990 96 aa4.96□□□□□ -1.62
SMPD4-201ENST00000351288 LORP23490 312 aaPredicted RBP4.95□□□□□ -1.62
SMPD4-201ENST00000351288 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
SMPD4-201ENST00000351288 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
SMPD4-201ENST00000351288 PCLOQ9Y6V0 5065 aa4.89□□□□□ -1.63
SMPD4-201ENST00000351288 BIRC6Q9NR09 4857 aa4.87□□□□□ -1.63
SMPD4-201ENST00000351288 KRTAP10-10P60014 251 aa4.84□□□□□ -1.64
SMPD4-201ENST00000351288 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
SMPD4-201ENST00000351288 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
SMPD4-201ENST00000351288 UBR4Q5T4S7 5183 aa4.77□□□□□ -1.65
SMPD4-201ENST00000351288 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
SMPD4-201ENST00000351288 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
SMPD4-201ENST00000351288 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
SMPD4-201ENST00000351288 TNP1P09430 55 aa4.64□□□□□ -1.67
SMPD4-201ENST00000351288 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
SMPD4-201ENST00000351288 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
SMPD4-201ENST00000351288 FSIP2Q5CZC0 6907 aa4.54□□□□□ -1.68
SMPD4-201ENST00000351288 MT1HP80294 61 aa4.53□□□□□ -1.68
SMPD4-201ENST00000351288 LCE2CQ5TA81 110 aa4.49□□□□□ -1.69
SMPD4-201ENST00000351288 MT1FP04733 61 aa4.46□□□□□ -1.7
SMPD4-201ENST00000351288 MT2AP02795 61 aa4.44□□□□□ -1.7
SMPD4-201ENST00000351288 USH2AO75445 5202 aa4.39□□□□□ -1.71
SMPD4-201ENST00000351288 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
SMPD4-201ENST00000351288 KRTAP19-1Q8IUB9 90 aa4.39□□□□□ -1.71
SMPD4-201ENST00000351288 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
SMPD4-201ENST00000351288 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
SMPD4-201ENST00000351288 KMT2DO14686 5537 aa4.3□□□□□ -1.72
SMPD4-201ENST00000351288 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
SMPD4-201ENST00000351288 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
SMPD4-201ENST00000351288 KRTAP10-12P60413 245 aa4.21□□□□□ -1.74
SMPD4-201ENST00000351288 MT1BP07438 61 aa4.16□□□□□ -1.74
SMPD4-201ENST00000351288 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
SMPD4-201ENST00000351288 MT1XP80297 61 aa4.13□□□□□ -1.75
SMPD4-201ENST00000351288 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
SMPD4-201ENST00000351288 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
SMPD4-201ENST00000351288 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
SMPD4-201ENST00000351288 LCE2BO14633 110 aa4.07□□□□□ -1.76
SMPD4-201ENST00000351288 KRTAP19-8Q3LI54 63 aa4.07□□□□□ -1.76
SMPD4-201ENST00000351288 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
SMPD4-201ENST00000351288 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
SMPD4-201ENST00000351288 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
SMPD4-201ENST00000351288 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
SMPD4-201ENST00000351288 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
SMPD4-201ENST00000351288 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
SMPD4-201ENST00000351288 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
SMPD4-201ENST00000351288 LCE2AQ5TA79 106 aaPredicted RBP3.94□□□□□ -1.78
SMPD4-201ENST00000351288 DSTQ03001 7570 aaKnown RBP3.92□□□□□ -1.78
SMPD4-201ENST00000351288 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
SMPD4-201ENST00000351288 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
SMPD4-201ENST00000351288 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
SMPD4-201ENST00000351288 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
SMPD4-201ENST00000351288 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
SMPD4-201ENST00000351288 FCGBPQ9Y6R7 5405 aaPredicted RBP3.78□□□□□ -1.8
SMPD4-201ENST00000351288 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
SMPD4-201ENST00000351288 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
SMPD4-201ENST00000351288 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
SMPD4-201ENST00000351288 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
SMPD4-201ENST00000351288 SYNE2Q8WXH0 6885 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms