RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 KRTAP4-5Q9BYR2 181 aa12.57□□□□□ -0.4
USP25-203ENST00000351097 XP32Q5T750 250 aa12.42□□□□□ -0.42
USP25-203ENST00000351097 COX6B2Q6YFQ2 88 aa12.41□□□□□ -0.42
USP25-203ENST00000351097 PRAC1Q96KF2 57 aa12.39□□□□□ -0.43
USP25-203ENST00000351097 RPL37P61927 97 aaKnown RBP12.38□□□□□ -0.43
USP25-203ENST00000351097 ABCA13Q86UQ4 5058 aa12.36□□□□□ -0.43
USP25-203ENST00000351097 ADM2Q7Z4H4 148 aa12.36□□□□□ -0.43
USP25-203ENST00000351097 H0YAA0 97 aa12.34□□□□□ -0.43
USP25-203ENST00000351097 A0A1B0GU33 70 aa12.32□□□□□ -0.44
USP25-203ENST00000351097 BIRC6Q9NR09 4857 aa12.3□□□□□ -0.44
USP25-203ENST00000351097 H1FX-AS1Q4G0G2 97 aa12.28□□□□□ -0.44
USP25-203ENST00000351097 HERC2O95714 4834 aa12.25□□□□□ -0.45
USP25-203ENST00000351097 TPRXLQ17RH7 258 aa12.23□□□□□ -0.45
USP25-203ENST00000351097 LRP2P98164 4655 aa12.11□□□□□ -0.47
USP25-203ENST00000351097 LPAP08519 4548 aa12.11□□□□□ -0.47
USP25-203ENST00000351097 J3QL48 77 aa12.1□□□□□ -0.47
USP25-203ENST00000351097 CSAG1Q6PB30 78 aa12.05□□□□□ -0.48
USP25-203ENST00000351097 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
USP25-203ENST00000351097 LINC01554Q52M75 96 aa12□□□□□ -0.49
USP25-203ENST00000351097 S4R3F8 94 aa11.96□□□□□ -0.49
USP25-203ENST00000351097 KRTAP10-6P60371 365 aaPredicted RBP11.95□□□□□ -0.5
USP25-203ENST00000351097 K7ERS5 55 aa11.94□□□□□ -0.5
USP25-203ENST00000351097 KRTAP3-2Q9BYR7 98 aa11.87□□□□□ -0.51
USP25-203ENST00000351097 PCLOQ9Y6V0 5065 aa11.81□□□□□ -0.52
USP25-203ENST00000351097 KRTAP13-4Q3LI77 160 aa11.79□□□□□ -0.52
USP25-203ENST00000351097 KRTAP25-1Q3LHN0 102 aa11.77□□□□□ -0.53
USP25-203ENST00000351097 SEC61BP60468 96 aaKnown RBP11.77□□□□□ -0.53
USP25-203ENST00000351097 P0C880 135 aa11.7□□□□□ -0.54
USP25-203ENST00000351097 A0A0D9SG42 100 aa11.69□□□□□ -0.54
USP25-203ENST00000351097 ROMO1P60602 79 aa11.65□□□□□ -0.54
USP25-203ENST00000351097 HERC1Q15751 4861 aa11.63□□□□□ -0.55
USP25-203ENST00000351097 KRTAP4-1Q9BYQ7 146 aa11.62□□□□□ -0.55
USP25-203ENST00000351097 MUC17Q685J3 4493 aa11.61□□□□□ -0.55
USP25-203ENST00000351097 CRIPTQ9P021 101 aa11.54□□□□□ -0.56
USP25-203ENST00000351097 HMCN2Q8NDA2 5059 aa11.53□□□□□ -0.56
USP25-203ENST00000351097 KRTAP12-2P59991 146 aa11.42□□□□□ -0.58
USP25-203ENST00000351097 M0QZ58 72 aa11.39□□□□□ -0.59
USP25-203ENST00000351097 MUC2Q02817 5179 aa11.38□□□□□ -0.59
USP25-203ENST00000351097 KRTAP12-1P59990 96 aa11.36□□□□□ -0.59
USP25-203ENST00000351097 KRTAP19-2Q3LHN2 52 aa11.36□□□□□ -0.59
USP25-203ENST00000351097 SPINT4Q6UDR6 99 aa11.32□□□□□ -0.6
USP25-203ENST00000351097 C10orf95Q9H7T3 257 aa11.17□□□□□ -0.62
USP25-203ENST00000351097 R4GN34 69 aa11.09□□□□□ -0.63
USP25-203ENST00000351097 FLGP20930 4061 aaPredicted RBP11.05□□□□□ -0.64
USP25-203ENST00000351097 UBR4Q5T4S7 5183 aa11.05□□□□□ -0.64
USP25-203ENST00000351097 RNF213Q63HN8 5207 aa10.96□□□□□ -0.66
USP25-203ENST00000351097 LCE2CQ5TA81 110 aa10.94□□□□□ -0.66
USP25-203ENST00000351097 LORP23490 312 aaPredicted RBP10.92□□□□□ -0.66
USP25-203ENST00000351097 FAT4Q6V0I7 4981 aa10.87□□□□□ -0.67
USP25-203ENST00000351097 H3BS24 57 aa10.79□□□□□ -0.68
USP25-203ENST00000351097 KRTAP15-1Q3LI76 137 aa10.71□□□□□ -0.69
USP25-203ENST00000351097 MT1HP80294 61 aa10.67□□□□□ -0.7
USP25-203ENST00000351097 M0R2T5 61 aa10.59□□□□□ -0.71
USP25-203ENST00000351097 CAMK2N1Q7Z7J9 78 aa10.53□□□□□ -0.72
USP25-203ENST00000351097 NDUFAF8A1L188 74 aa10.38□□□□□ -0.75
USP25-203ENST00000351097 PP632Q6XCG6 107 aa10.36□□□□□ -0.75
USP25-203ENST00000351097 KRTAP9-8Q9BYQ0 159 aa10.35□□□□□ -0.75
USP25-203ENST00000351097 MT2AP02795 61 aa10.34□□□□□ -0.75
USP25-203ENST00000351097 MT1FP04733 61 aa10.31□□□□□ -0.76
USP25-203ENST00000351097 PLAC4Q8WY50 150 aa10.29□□□□□ -0.76
USP25-203ENST00000351097 SPRR2GQ9BYE4 73 aa10.29□□□□□ -0.76
USP25-203ENST00000351097 KRTAP19-1Q8IUB9 90 aa10.27□□□□□ -0.77
USP25-203ENST00000351097 KRTAP10-10P60014 251 aa10.26□□□□□ -0.77
USP25-203ENST00000351097 TNP1P09430 55 aa10.15□□□□□ -0.79
USP25-203ENST00000351097 KRTAP23-1A1A580 65 aa10.05□□□□□ -0.8
USP25-203ENST00000351097 LCE2AQ5TA79 106 aaPredicted RBP9.98□□□□□ -0.81
USP25-203ENST00000351097 KRTAP19-8Q3LI54 63 aa9.95□□□□□ -0.82
USP25-203ENST00000351097 KRTAP9-3Q9BYQ3 159 aa9.94□□□□□ -0.82
USP25-203ENST00000351097 MT1BP07438 61 aa9.83□□□□□ -0.84
USP25-203ENST00000351097 LUZP6Q538Z0 58 aa9.81□□□□□ -0.84
USP25-203ENST00000351097 LCE2BO14633 110 aa9.63□□□□□ -0.87
USP25-203ENST00000351097 SPRR5A0A1B0GTR4 108 aa9.63□□□□□ -0.87
USP25-203ENST00000351097 KRTAP10-5P60370 271 aa9.6□□□□□ -0.87
USP25-203ENST00000351097 MT1XP80297 61 aa9.6□□□□□ -0.87
USP25-203ENST00000351097 LCE3AQ5TA76 89 aa9.59□□□□□ -0.87
USP25-203ENST00000351097 USH2AO75445 5202 aa9.43□□□□□ -0.9
USP25-203ENST00000351097 KRTAP8-1Q8IUC2 63 aa9.38□□□□□ -0.91
USP25-203ENST00000351097 PRO2289Q9P1D8 64 aa9.36□□□□□ -0.91
USP25-203ENST00000351097 A0A0A0MQY5 61 aa9.26□□□□□ -0.93
USP25-203ENST00000351097 KRTAP10-7P60409 375 aaPredicted RBP9.26□□□□□ -0.93
USP25-203ENST00000351097 KRTAP10-12P60413 245 aa9.26□□□□□ -0.93
USP25-203ENST00000351097 KRTAP12-3P60328 96 aa9.15□□□□□ -0.94
USP25-203ENST00000351097 SSPOA2VEC9 5147 aa9.02□□□□□ -0.97
USP25-203ENST00000351097 KMT2DO14686 5537 aa8.9□□□□□ -0.98
USP25-203ENST00000351097 FSIP2Q5CZC0 6907 aa8.9□□□□□ -0.98
USP25-203ENST00000351097 KRTAP19-6Q3LI70 58 aa8.89□□□□□ -0.99
USP25-203ENST00000351097 LCE2DQ5TA82 110 aaPredicted RBP8.86□□□□□ -0.99
USP25-203ENST00000351097 KRTAP4-8A0A0G2JLE6 195 aa8.83□□□□□ -1
USP25-203ENST00000351097 KRTAP4-8Q9BYQ9 185 aa8.83□□□□□ -1
USP25-203ENST00000351097 KRTAP19-5Q3LI72 72 aa8.77□□□□□ -1.01
USP25-203ENST00000351097 LCE3CQ5T5A8 94 aa8.61□□□□□ -1.03
USP25-203ENST00000351097 KRTAP19-7Q3SYF9 63 aa8.57□□□□□ -1.04
USP25-203ENST00000351097 FCGBPQ9Y6R7 5405 aaPredicted RBP8.55□□□□□ -1.04
USP25-203ENST00000351097 INE1O15225 51 aa8.44□□□□□ -1.06
USP25-203ENST00000351097 MT1EP04732 61 aa8.38□□□□□ -1.07
USP25-203ENST00000351097 KRTAP9-2Q9BYQ4 174 aa8.37□□□□□ -1.07
USP25-203ENST00000351097 KRTAP9-6A8MVA2 160 aa8.26□□□□□ -1.09
USP25-203ENST00000351097 MT1LQ93083 61 aa8.26□□□□□ -1.09
USP25-203ENST00000351097 KRTAP19-4Q3LI73 84 aa8.24□□□□□ -1.09
USP25-203ENST00000351097 KRTAP4-7Q9BYR0 210 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms