RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 PCLOQ9Y6V0 5065 aa7.28□□□□□ -1.24
UBA3-201ENST00000349511 SPATA8Q6RVD6 105 aa7.21□□□□□ -1.25
UBA3-201ENST00000349511 RBM12B-AS1Q9P1G2 102 aa7.21□□□□□ -1.25
UBA3-201ENST00000349511 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
UBA3-201ENST00000349511 LRP2P98164 4655 aa7.19□□□□□ -1.26
UBA3-201ENST00000349511 A8MUU9 505 aa7.19□□□□□ -1.26
UBA3-201ENST00000349511 UQCR11O14957 56 aa7.18□□□□□ -1.26
UBA3-201ENST00000349511 MIR22HGQ0VDD5 57 aa7.18□□□□□ -1.26
UBA3-201ENST00000349511 HERC1Q15751 4861 aa7.17□□□□□ -1.26
UBA3-201ENST00000349511 XP32Q5T750 250 aa7.16□□□□□ -1.26
UBA3-201ENST00000349511 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
UBA3-201ENST00000349511 RPL37P61927 97 aaKnown RBP7.08□□□□□ -1.28
UBA3-201ENST00000349511 PRAC1Q96KF2 57 aa7.07□□□□□ -1.28
UBA3-201ENST00000349511 ADM2Q7Z4H4 148 aa7.06□□□□□ -1.28
UBA3-201ENST00000349511 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
UBA3-201ENST00000349511 HMCN2Q8NDA2 5059 aa6.97□□□□□ -1.29
UBA3-201ENST00000349511 H0YAA0 97 aa6.94□□□□□ -1.3
UBA3-201ENST00000349511 MUC2Q02817 5179 aa6.91□□□□□ -1.3
UBA3-201ENST00000349511 A0A1B0GU33 70 aa6.9□□□□□ -1.3
UBA3-201ENST00000349511 COX6B2Q6YFQ2 88 aa6.89□□□□□ -1.31
UBA3-201ENST00000349511 H1FX-AS1Q4G0G2 97 aa6.88□□□□□ -1.31
UBA3-201ENST00000349511 CSAG1Q6PB30 78 aa6.85□□□□□ -1.31
UBA3-201ENST00000349511 MUC17Q685J3 4493 aa6.85□□□□□ -1.31
UBA3-201ENST00000349511 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
UBA3-201ENST00000349511 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
UBA3-201ENST00000349511 KRTAP3-2Q9BYR7 98 aa6.85□□□□□ -1.31
UBA3-201ENST00000349511 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
UBA3-201ENST00000349511 KRTAP4-1Q9BYQ7 146 aa6.82□□□□□ -1.32
UBA3-201ENST00000349511 UBR4Q5T4S7 5183 aa6.76□□□□□ -1.33
UBA3-201ENST00000349511 RNF213Q63HN8 5207 aa6.71□□□□□ -1.34
UBA3-201ENST00000349511 KRTAP10-6P60371 365 aaPredicted RBP6.68□□□□□ -1.34
UBA3-201ENST00000349511 K7ERS5 55 aa6.67□□□□□ -1.34
UBA3-201ENST00000349511 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
UBA3-201ENST00000349511 S4R3F8 94 aa6.64□□□□□ -1.35
UBA3-201ENST00000349511 KRTAP13-4Q3LI77 160 aa6.62□□□□□ -1.35
UBA3-201ENST00000349511 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.35
UBA3-201ENST00000349511 A0A0D9SG42 100 aa6.57□□□□□ -1.36
UBA3-201ENST00000349511 CRIPTQ9P021 101 aa6.57□□□□□ -1.36
UBA3-201ENST00000349511 KRTAP19-2Q3LHN2 52 aa6.56□□□□□ -1.36
UBA3-201ENST00000349511 ROMO1P60602 79 aa6.55□□□□□ -1.36
UBA3-201ENST00000349511 P0C880 135 aa6.54□□□□□ -1.36
UBA3-201ENST00000349511 FLGP20930 4061 aaPredicted RBP6.48□□□□□ -1.37
UBA3-201ENST00000349511 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
UBA3-201ENST00000349511 KRTAP12-2P59991 146 aa6.41□□□□□ -1.38
UBA3-201ENST00000349511 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
UBA3-201ENST00000349511 SPINT4Q6UDR6 99 aa6.35□□□□□ -1.39
UBA3-201ENST00000349511 LOC100996750A0A140TA64 210 aa6.34□□□□□ -1.4
UBA3-201ENST00000349511 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.4
UBA3-201ENST00000349511 C10orf95Q9H7T3 257 aa6.34□□□□□ -1.4
UBA3-201ENST00000349511 M0QZ58 72 aa6.32□□□□□ -1.4
UBA3-201ENST00000349511 M0R2T5 61 aa6.3□□□□□ -1.4
UBA3-201ENST00000349511 MT1HP80294 61 aa6.3□□□□□ -1.4
UBA3-201ENST00000349511 H3BS24 57 aa6.26□□□□□ -1.41
UBA3-201ENST00000349511 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
UBA3-201ENST00000349511 R4GN34 69 aa6.16□□□□□ -1.42
UBA3-201ENST00000349511 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
UBA3-201ENST00000349511 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
UBA3-201ENST00000349511 MT2AP02795 61 aa6.05□□□□□ -1.44
UBA3-201ENST00000349511 MT1FP04733 61 aa6.04□□□□□ -1.44
UBA3-201ENST00000349511 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
UBA3-201ENST00000349511 LCE2AQ5TA79 106 aaPredicted RBP6.02□□□□□ -1.45
UBA3-201ENST00000349511 LCE2BO14633 110 aa5.95□□□□□ -1.46
UBA3-201ENST00000349511 NDUFAF8A1L188 74 aa5.94□□□□□ -1.46
UBA3-201ENST00000349511 KRTAP19-1Q8IUB9 90 aa5.92□□□□□ -1.46
UBA3-201ENST00000349511 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
UBA3-201ENST00000349511 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
UBA3-201ENST00000349511 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
UBA3-201ENST00000349511 PLAC4Q8WY50 150 aa5.81□□□□□ -1.48
UBA3-201ENST00000349511 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
UBA3-201ENST00000349511 USH2AO75445 5202 aa5.76□□□□□ -1.49
UBA3-201ENST00000349511 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
UBA3-201ENST00000349511 MT1BP07438 61 aa5.69□□□□□ -1.5
UBA3-201ENST00000349511 TNP1P09430 55 aa5.65□□□□□ -1.51
UBA3-201ENST00000349511 FSIP2Q5CZC0 6907 aa5.62□□□□□ -1.51
UBA3-201ENST00000349511 KRTAP4-8Q9BYQ9 185 aa5.6□□□□□ -1.51
UBA3-201ENST00000349511 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
UBA3-201ENST00000349511 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
UBA3-201ENST00000349511 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
UBA3-201ENST00000349511 MT1XP80297 61 aa5.51□□□□□ -1.53
UBA3-201ENST00000349511 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
UBA3-201ENST00000349511 SSPOA2VEC9 5147 aa5.49□□□□□ -1.53
UBA3-201ENST00000349511 KRTAP9-2Q9BYQ4 174 aa5.48□□□□□ -1.53
UBA3-201ENST00000349511 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.54
UBA3-201ENST00000349511 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
UBA3-201ENST00000349511 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
UBA3-201ENST00000349511 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
UBA3-201ENST00000349511 KMT2DO14686 5537 aa5.35□□□□□ -1.55
UBA3-201ENST00000349511 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
UBA3-201ENST00000349511 LCE3BQ5TA77 95 aa5.29□□□□□ -1.56
UBA3-201ENST00000349511 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
UBA3-201ENST00000349511 A0A0A0MQY5 61 aa5.27□□□□□ -1.57
UBA3-201ENST00000349511 KRTAP4-8A0A0G2JLE6 195 aa5.25□□□□□ -1.57
UBA3-201ENST00000349511 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
UBA3-201ENST00000349511 FCGBPQ9Y6R7 5405 aaPredicted RBP5.22□□□□□ -1.57
UBA3-201ENST00000349511 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
UBA3-201ENST00000349511 KRTAP9-9Q9BYP9 154 aa5.2□□□□□ -1.58
UBA3-201ENST00000349511 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
UBA3-201ENST00000349511 KRTAP4-12Q9BQ66 201 aa5.12□□□□□ -1.59
UBA3-201ENST00000349511 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
UBA3-201ENST00000349511 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms