RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 PCLOQ9Y6V0 5065 aa10.52□□□□□ -0.72
CHRNA3-202ENST00000348639 SEC61GP60059 68 aa10.5□□□□□ -0.73
CHRNA3-202ENST00000348639 UQCR11O14957 56 aa10.46□□□□□ -0.73
CHRNA3-202ENST00000348639 J3QL48 77 aa10.46□□□□□ -0.74
CHRNA3-202ENST00000348639 PMAIP1Q13794 54 aa10.43□□□□□ -0.74
CHRNA3-202ENST00000348639 LPAP08519 4548 aa10.43□□□□□ -0.74
CHRNA3-202ENST00000348639 SPATA8Q6RVD6 105 aa10.43□□□□□ -0.74
CHRNA3-202ENST00000348639 LRP2P98164 4655 aa10.41□□□□□ -0.74
CHRNA3-202ENST00000348639 MIR22HGQ0VDD5 57 aa10.39□□□□□ -0.75
CHRNA3-202ENST00000348639 KRTAP3-3Q9BYR6 98 aa10.31□□□□□ -0.76
CHRNA3-202ENST00000348639 A6NN06 94 aa10.31□□□□□ -0.76
CHRNA3-202ENST00000348639 S4R3F8 94 aa10.29□□□□□ -0.76
CHRNA3-202ENST00000348639 H1FX-AS1Q4G0G2 97 aa10.25□□□□□ -0.77
CHRNA3-202ENST00000348639 A0A1B0GU33 70 aa10.24□□□□□ -0.77
CHRNA3-202ENST00000348639 HERC1Q15751 4861 aa10.21□□□□□ -0.77
CHRNA3-202ENST00000348639 RBM12B-AS1Q9P1G2 102 aa10.2□□□□□ -0.78
CHRNA3-202ENST00000348639 H0YAA0 97 aa10.17□□□□□ -0.78
CHRNA3-202ENST00000348639 SEC61BP60468 96 aaKnown RBP10.17□□□□□ -0.78
CHRNA3-202ENST00000348639 KTN1-AS1Q86SY8 53 aa10.13□□□□□ -0.79
CHRNA3-202ENST00000348639 KRTAP10-6P60371 365 aaPredicted RBP10.09□□□□□ -0.79
CHRNA3-202ENST00000348639 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
CHRNA3-202ENST00000348639 CSAG1Q6PB30 78 aa10□□□□□ -0.81
CHRNA3-202ENST00000348639 KRTAP4-1Q9BYQ7 146 aa10□□□□□ -0.81
CHRNA3-202ENST00000348639 HMCN2Q8NDA2 5059 aa9.99□□□□□ -0.81
CHRNA3-202ENST00000348639 MUC17Q685J3 4493 aa9.96□□□□□ -0.82
CHRNA3-202ENST00000348639 P0C880 135 aa9.94□□□□□ -0.82
CHRNA3-202ENST00000348639 ADM2Q7Z4H4 148 aa9.9□□□□□ -0.82
CHRNA3-202ENST00000348639 KRTAP13-4Q3LI77 160 aa9.89□□□□□ -0.83
CHRNA3-202ENST00000348639 K7ERS5 55 aa9.81□□□□□ -0.84
CHRNA3-202ENST00000348639 MUC2Q02817 5179 aa9.79□□□□□ -0.84
CHRNA3-202ENST00000348639 KRTAP19-2Q3LHN2 52 aa9.77□□□□□ -0.85
CHRNA3-202ENST00000348639 A0A0D9SG42 100 aa9.75□□□□□ -0.85
CHRNA3-202ENST00000348639 PRAC1Q96KF2 57 aa9.74□□□□□ -0.85
CHRNA3-202ENST00000348639 M0QZ58 72 aa9.69□□□□□ -0.86
CHRNA3-202ENST00000348639 UBR4Q5T4S7 5183 aa9.61□□□□□ -0.87
CHRNA3-202ENST00000348639 KRTAP12-2P59991 146 aa9.55□□□□□ -0.88
CHRNA3-202ENST00000348639 KRTAP12-1P59990 96 aa9.53□□□□□ -0.88
CHRNA3-202ENST00000348639 R4GN34 69 aa9.51□□□□□ -0.89
CHRNA3-202ENST00000348639 ROMO1P60602 79 aa9.5□□□□□ -0.89
CHRNA3-202ENST00000348639 FLGP20930 4061 aaPredicted RBP9.49□□□□□ -0.89
CHRNA3-202ENST00000348639 SPINT4Q6UDR6 99 aa9.47□□□□□ -0.89
CHRNA3-202ENST00000348639 LORP23490 312 aaPredicted RBP9.44□□□□□ -0.9
CHRNA3-202ENST00000348639 RNF213Q63HN8 5207 aa9.43□□□□□ -0.9
CHRNA3-202ENST00000348639 LINC01554Q52M75 96 aa9.41□□□□□ -0.9
CHRNA3-202ENST00000348639 KRTAP25-1Q3LHN0 102 aa9.38□□□□□ -0.91
CHRNA3-202ENST00000348639 LCE2CQ5TA81 110 aa9.36□□□□□ -0.91
CHRNA3-202ENST00000348639 FAT4Q6V0I7 4981 aa9.3□□□□□ -0.92
CHRNA3-202ENST00000348639 CRIPTQ9P021 101 aa9.29□□□□□ -0.92
CHRNA3-202ENST00000348639 M0R2T5 61 aa9.21□□□□□ -0.93
CHRNA3-202ENST00000348639 MT1HP80294 61 aa9.17□□□□□ -0.94
CHRNA3-202ENST00000348639 C10orf95Q9H7T3 257 aa9.06□□□□□ -0.96
CHRNA3-202ENST00000348639 CAMK2N1Q7Z7J9 78 aa8.96□□□□□ -0.98
CHRNA3-202ENST00000348639 SPRR2GQ9BYE4 73 aa8.93□□□□□ -0.98
CHRNA3-202ENST00000348639 MT2AP02795 61 aa8.89□□□□□ -0.99
CHRNA3-202ENST00000348639 KRTAP10-10P60014 251 aa8.89□□□□□ -0.99
CHRNA3-202ENST00000348639 MT1FP04733 61 aa8.87□□□□□ -0.99
CHRNA3-202ENST00000348639 KRTAP19-1Q8IUB9 90 aa8.87□□□□□ -0.99
CHRNA3-202ENST00000348639 KRTAP9-8Q9BYQ0 159 aa8.87□□□□□ -0.99
CHRNA3-202ENST00000348639 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
CHRNA3-202ENST00000348639 PLAC4Q8WY50 150 aa8.73□□□□□ -1.01
CHRNA3-202ENST00000348639 KRTAP19-8Q3LI54 63 aa8.61□□□□□ -1.03
CHRNA3-202ENST00000348639 PP632Q6XCG6 107 aa8.61□□□□□ -1.03
CHRNA3-202ENST00000348639 TNP1P09430 55 aa8.61□□□□□ -1.03
CHRNA3-202ENST00000348639 KRTAP9-3Q9BYQ3 159 aa8.52□□□□□ -1.05
CHRNA3-202ENST00000348639 KRTAP23-1A1A580 65 aa8.47□□□□□ -1.05
CHRNA3-202ENST00000348639 MT1BP07438 61 aa8.47□□□□□ -1.05
CHRNA3-202ENST00000348639 KRTAP15-1Q3LI76 137 aa8.44□□□□□ -1.06
CHRNA3-202ENST00000348639 KRTAP10-5P60370 271 aa8.32□□□□□ -1.08
CHRNA3-202ENST00000348639 MT1XP80297 61 aa8.32□□□□□ -1.08
CHRNA3-202ENST00000348639 LCE2BO14633 110 aa8.27□□□□□ -1.09
CHRNA3-202ENST00000348639 LCE3AQ5TA76 89 aa8.17□□□□□ -1.1
CHRNA3-202ENST00000348639 PRO2289Q9P1D8 64 aa8.13□□□□□ -1.11
CHRNA3-202ENST00000348639 USH2AO75445 5202 aa8.09□□□□□ -1.11
CHRNA3-202ENST00000348639 KRTAP10-12P60413 245 aa8.03□□□□□ -1.12
CHRNA3-202ENST00000348639 KRTAP10-7P60409 375 aaPredicted RBP8.02□□□□□ -1.13
CHRNA3-202ENST00000348639 KRTAP8-1Q8IUC2 63 aa8.02□□□□□ -1.13
CHRNA3-202ENST00000348639 NDUFAF8A1L188 74 aa8□□□□□ -1.13
CHRNA3-202ENST00000348639 LCE2DQ5TA82 110 aaPredicted RBP8□□□□□ -1.13
CHRNA3-202ENST00000348639 FSIP2Q5CZC0 6907 aa7.94□□□□□ -1.14
CHRNA3-202ENST00000348639 KRTAP9-2Q9BYQ4 174 aa7.88□□□□□ -1.15
CHRNA3-202ENST00000348639 SPRR5A0A1B0GTR4 108 aa7.85□□□□□ -1.15
CHRNA3-202ENST00000348639 KRTAP12-3P60328 96 aa7.83□□□□□ -1.16
CHRNA3-202ENST00000348639 LUZP6Q538Z0 58 aa7.81□□□□□ -1.16
CHRNA3-202ENST00000348639 H3BS24 57 aa7.8□□□□□ -1.16
CHRNA3-202ENST00000348639 SSPOA2VEC9 5147 aa7.8□□□□□ -1.16
CHRNA3-202ENST00000348639 KMT2DO14686 5537 aa7.7□□□□□ -1.18
CHRNA3-202ENST00000348639 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
CHRNA3-202ENST00000348639 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
CHRNA3-202ENST00000348639 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
CHRNA3-202ENST00000348639 KRTAP19-6Q3LI70 58 aa7.61□□□□□ -1.19
CHRNA3-202ENST00000348639 CRCT1Q9UGL9 99 aa7.54□□□□□ -1.2
CHRNA3-202ENST00000348639 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
CHRNA3-202ENST00000348639 KRTAP19-7Q3SYF9 63 aa7.41□□□□□ -1.22
CHRNA3-202ENST00000348639 LCE3CQ5T5A8 94 aa7.35□□□□□ -1.23
CHRNA3-202ENST00000348639 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
CHRNA3-202ENST00000348639 MT1EP04732 61 aa7.24□□□□□ -1.25
CHRNA3-202ENST00000348639 MACF1Q9UPN3 7388 aaKnown RBP7.21□□□□□ -1.25
CHRNA3-202ENST00000348639 KRTAP19-4Q3LI73 84 aa7.21□□□□□ -1.26
CHRNA3-202ENST00000348639 MT1LQ93083 61 aa7.17□□□□□ -1.26
CHRNA3-202ENST00000348639 A0A0A0MQY5 61 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms