RNA–Protein interactions for RNA: ENST00000346208.3

GATA3-201, Transcript of GATA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GATA3, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATA3-201ENST00000346208 KRTAP3-2Q9BYR7 98 aa8.42□□□□□ -1.06
GATA3-201ENST00000346208 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
GATA3-201ENST00000346208 HYDINQ4G0P3 5121 aa8.4□□□□□ -1.06
GATA3-201ENST00000346208 S4R3F8 94 aa8.39□□□□□ -1.07
GATA3-201ENST00000346208 SACSQ9NZJ4 4579 aa8.37□□□□□ -1.07
GATA3-201ENST00000346208 KRTAP12-2P59991 146 aa8.36□□□□□ -1.07
GATA3-201ENST00000346208 SMR3BP02814 79 aaPredicted RBP8.29□□□□□ -1.08
GATA3-201ENST00000346208 PKHD1P08F94 4074 aa8.28□□□□□ -1.08
GATA3-201ENST00000346208 PKHD1L1Q86WI1 4243 aa8.27□□□□□ -1.09
GATA3-201ENST00000346208 SEC61BP60468 96 aaKnown RBP8.26□□□□□ -1.09
GATA3-201ENST00000346208 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
GATA3-201ENST00000346208 XP32Q5T750 250 aa8.21□□□□□ -1.09
GATA3-201ENST00000346208 FAT1Q14517 4588 aa8.21□□□□□ -1.09
GATA3-201ENST00000346208 KRTAP10-8P60410 259 aa8.15□□□□□ -1.1
GATA3-201ENST00000346208 APOBP04114 4563 aaKnown RBP8.14□□□□□ -1.11
GATA3-201ENST00000346208 DYNC1H1Q14204 4646 aaKnown RBP8.14□□□□□ -1.11
GATA3-201ENST00000346208 KRTAP10-4P60372 401 aaPredicted RBP8.09□□□□□ -1.11
GATA3-201ENST00000346208 LUZP6Q538Z0 58 aa8.08□□□□□ -1.12
GATA3-201ENST00000346208 HSPG2P98160 4391 aa8.06□□□□□ -1.12
GATA3-201ENST00000346208 KMT2CQ8NEZ4 4911 aaKnown RBP8.04□□□□□ -1.12
GATA3-201ENST00000346208 FAT3Q8TDW7 4589 aa8.03□□□□□ -1.12
GATA3-201ENST00000346208 RYR2Q92736 4967 aa8.01□□□□□ -1.13
GATA3-201ENST00000346208 LRP1Q07954 4544 aaKnown RBP8.01□□□□□ -1.13
GATA3-201ENST00000346208 PLAC4Q8WY50 150 aa7.96□□□□□ -1.14
GATA3-201ENST00000346208 MYCBP2O75592 4640 aa7.94□□□□□ -1.14
GATA3-201ENST00000346208 M0QZ58 72 aa7.91□□□□□ -1.14
GATA3-201ENST00000346208 TNXBP22105 4242 aa7.87□□□□□ -1.15
GATA3-201ENST00000346208 RYR3Q15413 4870 aa7.87□□□□□ -1.15
GATA3-201ENST00000346208 A0A1B0GVY2 172 aa7.84□□□□□ -1.16
GATA3-201ENST00000346208 LCE2DQ5TA82 110 aaPredicted RBP7.79□□□□□ -1.16
GATA3-201ENST00000346208 LPAP08519 4548 aa7.76□□□□□ -1.17
GATA3-201ENST00000346208 R4GN34 69 aa7.66□□□□□ -1.18
GATA3-201ENST00000346208 EPPK1P58107 5090 aaKnown RBP7.6□□□□□ -1.19
GATA3-201ENST00000346208 LRP2P98164 4655 aa7.59□□□□□ -1.19
GATA3-201ENST00000346208 Q5VSD8 79 aa7.56□□□□□ -1.2
GATA3-201ENST00000346208 KIAA1109Q2LD37 5005 aa7.56□□□□□ -1.2
GATA3-201ENST00000346208 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
GATA3-201ENST00000346208 RYR1P21817 5038 aa7.55□□□□□ -1.2
GATA3-201ENST00000346208 KRTAP17-1Q9BYP8 105 aa7.54□□□□□ -1.2
GATA3-201ENST00000346208 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
GATA3-201ENST00000346208 MT1HL1P0DM35 61 aa7.44□□□□□ -1.22
GATA3-201ENST00000346208 CAMK2N1Q7Z7J9 78 aa7.37□□□□□ -1.23
GATA3-201ENST00000346208 KRTAP4-5Q9BYR2 181 aa7.29□□□□□ -1.24
GATA3-201ENST00000346208 SPRR5A0A1B0GTR4 108 aa7.26□□□□□ -1.25
GATA3-201ENST00000346208 KRTAP23-1A1A580 65 aa7.26□□□□□ -1.25
GATA3-201ENST00000346208 ABCA13Q86UQ4 5058 aa7.2□□□□□ -1.26
GATA3-201ENST00000346208 MUC17Q685J3 4493 aa7.19□□□□□ -1.26
GATA3-201ENST00000346208 BIRC6Q9NR09 4857 aa7.17□□□□□ -1.26
GATA3-201ENST00000346208 TNP1P09430 55 aa7.13□□□□□ -1.27
GATA3-201ENST00000346208 KRTAP4-1Q9BYQ7 146 aa7.12□□□□□ -1.27
GATA3-201ENST00000346208 HERC2O95714 4834 aa7.09□□□□□ -1.27
GATA3-201ENST00000346208 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
GATA3-201ENST00000346208 KRTAP19-2Q3LHN2 52 aa7.01□□□□□ -1.29
GATA3-201ENST00000346208 PCLOQ9Y6V0 5065 aa6.95□□□□□ -1.3
GATA3-201ENST00000346208 MUC2Q02817 5179 aa6.85□□□□□ -1.31
GATA3-201ENST00000346208 INE1O15225 51 aa6.84□□□□□ -1.31
GATA3-201ENST00000346208 FLGP20930 4061 aaPredicted RBP6.81□□□□□ -1.32
GATA3-201ENST00000346208 HERC1Q15751 4861 aa6.81□□□□□ -1.32
GATA3-201ENST00000346208 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
GATA3-201ENST00000346208 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.33
GATA3-201ENST00000346208 LCE3AQ5TA76 89 aa6.76□□□□□ -1.33
GATA3-201ENST00000346208 HMCN2Q8NDA2 5059 aa6.65□□□□□ -1.35
GATA3-201ENST00000346208 SPRR2GQ9BYE4 73 aa6.56□□□□□ -1.36
GATA3-201ENST00000346208 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
GATA3-201ENST00000346208 LCE2BO14633 110 aa6.5□□□□□ -1.37
GATA3-201ENST00000346208 KRTAP8-1Q8IUC2 63 aa6.48□□□□□ -1.37
GATA3-201ENST00000346208 FAT4Q6V0I7 4981 aa6.47□□□□□ -1.37
GATA3-201ENST00000346208 UBR4Q5T4S7 5183 aa6.46□□□□□ -1.38
GATA3-201ENST00000346208 RNF213Q63HN8 5207 aa6.41□□□□□ -1.38
GATA3-201ENST00000346208 KRTAP10-12P60413 245 aa6.37□□□□□ -1.39
GATA3-201ENST00000346208 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
GATA3-201ENST00000346208 M0R2T5 61 aa6.31□□□□□ -1.4
GATA3-201ENST00000346208 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
GATA3-201ENST00000346208 MT1FP04733 61 aa6.26□□□□□ -1.41
GATA3-201ENST00000346208 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
GATA3-201ENST00000346208 MT2AP02795 61 aa6.22□□□□□ -1.41
GATA3-201ENST00000346208 MT1XP80297 61 aa6.2□□□□□ -1.42
GATA3-201ENST00000346208 MT1HP80294 61 aa6.18□□□□□ -1.42
GATA3-201ENST00000346208 KRTAP19-8Q3LI54 63 aa6.17□□□□□ -1.42
GATA3-201ENST00000346208 MT1BP07438 61 aa6.13□□□□□ -1.43
GATA3-201ENST00000346208 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
GATA3-201ENST00000346208 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
GATA3-201ENST00000346208 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
GATA3-201ENST00000346208 KRTAP19-5Q3LI72 72 aa5.93□□□□□ -1.46
GATA3-201ENST00000346208 KRTAP9-6A8MVA2 160 aa5.93□□□□□ -1.46
GATA3-201ENST00000346208 KRTAP2-3P0C7H8 128 aa5.84□□□□□ -1.47
GATA3-201ENST00000346208 KRTAP2-4Q9BYR9 128 aa5.84□□□□□ -1.47
GATA3-201ENST00000346208 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
GATA3-201ENST00000346208 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
GATA3-201ENST00000346208 KMT2DO14686 5537 aa5.79□□□□□ -1.48
GATA3-201ENST00000346208 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
GATA3-201ENST00000346208 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
GATA3-201ENST00000346208 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
GATA3-201ENST00000346208 USH2AO75445 5202 aa5.61□□□□□ -1.51
GATA3-201ENST00000346208 KRTAP19-7Q3SYF9 63 aa5.53□□□□□ -1.52
GATA3-201ENST00000346208 MT1LQ93083 61 aa5.39□□□□□ -1.55
GATA3-201ENST00000346208 FSIP2Q5CZC0 6907 aa5.35□□□□□ -1.55
GATA3-201ENST00000346208 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
GATA3-201ENST00000346208 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
GATA3-201ENST00000346208 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms