RNA–Protein interactions for RNA: ENST00000346208.3

GATA3-201, Transcript of GATA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GATA3, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATA3-201ENST00000346208 NISCHQ9Y2I1 1504 aa30.68■■■□□ 2.5
GATA3-201ENST00000346208 HRCP23327 699 aa27.79■■■□□ 2.04
GATA3-201ENST00000346208 PPARGC1BQ86YN6 1023 aaKnown RBP27.28■■□□□ 1.96
GATA3-201ENST00000346208 SHROOM4Q9ULL8 1493 aa27.15■■□□□ 1.94
GATA3-201ENST00000346208 PCGF6Q9BYE7 350 aa27.1■■□□□ 1.93
GATA3-201ENST00000346208 PELP1Q8IZL8 1130 aaKnown RBP27.1■■□□□ 1.93
GATA3-201ENST00000346208 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
GATA3-201ENST00000346208 MYO15BQ96JP2 1530 aa26.94■■□□□ 1.9
GATA3-201ENST00000346208 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
GATA3-201ENST00000346208 SCAF1Q9H7N4 1312 aaKnown RBP26.48■■□□□ 1.83
GATA3-201ENST00000346208 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
GATA3-201ENST00000346208 TRIM26Q12899 539 aaPredicted RBP26.11■■□□□ 1.77
GATA3-201ENST00000346208 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
GATA3-201ENST00000346208 ZCCHC6Q5VYS8 1495 aaKnown RBP26.08■■□□□ 1.77
GATA3-201ENST00000346208 MYT1Q01538 1121 aa26.08■■□□□ 1.76
GATA3-201ENST00000346208 LOC105371045A0A1W2PR82 267 aa26.04■■□□□ 1.76
GATA3-201ENST00000346208 ZEB1P37275 1124 aaPredicted RBP25.95■■□□□ 1.74
GATA3-201ENST00000346208 ACIN1Q9UKV3 1341 aaKnown RBP25.7■■□□□ 1.71
GATA3-201ENST00000346208 NEUROD1Q13562 356 aa25.65■■□□□ 1.7
GATA3-201ENST00000346208 DCAF8L2P0C7V8 631 aa25.61■■□□□ 1.69
GATA3-201ENST00000346208 GTF3C3Q9Y5Q9 886 aa25.52■■□□□ 1.68
GATA3-201ENST00000346208 CENPBP07199 599 aaPredicted RBP25.29■■□□□ 1.64
GATA3-201ENST00000346208 DIEXFQ68CQ4 756 aaKnown RBP25.11■■□□□ 1.61
GATA3-201ENST00000346208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.04■■□□□ 1.6
GATA3-201ENST00000346208 FAM9AQ8IZU1 332 aaPredicted RBP25.02■■□□□ 1.6
GATA3-201ENST00000346208 TRIM41Q8WV44 630 aa25.01■■□□□ 1.59
GATA3-201ENST00000346208 CCER1Q8TC90 406 aaPredicted RBP24.97■■□□□ 1.59
GATA3-201ENST00000346208 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
GATA3-201ENST00000346208 YTHDC1Q96MU7 727 aaKnown RBP24.8■■□□□ 1.56
GATA3-201ENST00000346208 ABCC9O60706 1549 aa24.75■■□□□ 1.55
GATA3-201ENST00000346208 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
GATA3-201ENST00000346208 RB1CC1Q8TDY2 1594 aa24.56■■□□□ 1.52
GATA3-201ENST00000346208 ZNF316A6NFI3 1004 aaPredicted RBP24.56■■□□□ 1.52
GATA3-201ENST00000346208 BCL11AQ9H165 835 aa24.52■■□□□ 1.52
GATA3-201ENST00000346208 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
GATA3-201ENST00000346208 MIER1Q8N108 512 aa24.48■■□□□ 1.51
GATA3-201ENST00000346208 ANP32EQ9BTT0 268 aa24.36■■□□□ 1.49
GATA3-201ENST00000346208 SCRIBQ14160 1630 aa24.3■■□□□ 1.48
GATA3-201ENST00000346208 SUPT16HQ9Y5B9 1047 aaKnown RBP24.23■■□□□ 1.47
GATA3-201ENST00000346208 TSHZ2Q9NRE2 1034 aa24.21■■□□□ 1.47
GATA3-201ENST00000346208 CSRNP3Q8WYN3 585 aa24.15■■□□□ 1.46
GATA3-201ENST00000346208 WRNQ14191 1432 aaPredicted RBP eCLIP24.09■■□□□ 1.45
GATA3-201ENST00000346208 CLSPNQ9HAW4 1339 aa24.07■■□□□ 1.44
GATA3-201ENST00000346208 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
GATA3-201ENST00000346208 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
GATA3-201ENST00000346208 CEP162Q5TB80 1403 aa23.97■■□□□ 1.43
GATA3-201ENST00000346208 WIZO95785 1651 aa23.89■■□□□ 1.41
GATA3-201ENST00000346208 HNRNPUL2Q1KMD3 747 aaKnown RBP23.83■■□□□ 1.41
GATA3-201ENST00000346208 TNIKQ9UKE5 1360 aa23.82■■□□□ 1.4
GATA3-201ENST00000346208 EIF4G1Q04637 1599 aaKnown RBP23.81■■□□□ 1.4
GATA3-201ENST00000346208 CCDC88BA6NC98 1476 aa23.8■■□□□ 1.4
GATA3-201ENST00000346208 UBTFP17480 764 aaKnown RBP23.75■■□□□ 1.39
GATA3-201ENST00000346208 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
GATA3-201ENST00000346208 SOGA1O94964 1423 aa23.73■■□□□ 1.39
GATA3-201ENST00000346208 BCANQ96GW7 911 aa23.73■■□□□ 1.39
GATA3-201ENST00000346208 BAZ1AQ9NRL2 1556 aaPredicted RBP23.68■■□□□ 1.38
GATA3-201ENST00000346208 PRKCSHP14314 528 aaPredicted RBP23.67■■□□□ 1.38
GATA3-201ENST00000346208 RUSC2Q8N2Y8 1516 aa23.6■■□□□ 1.37
GATA3-201ENST00000346208 RBM19Q9Y4C8 960 aaKnown RBP23.58■■□□□ 1.37
GATA3-201ENST00000346208 FKBP8Q14318 412 aa23.54■■□□□ 1.36
GATA3-201ENST00000346208 EEA1Q15075 1411 aa23.52■■□□□ 1.36
GATA3-201ENST00000346208 KCNH8Q96L42 1107 aa23.51■■□□□ 1.35
GATA3-201ENST00000346208 GOLGA3Q08378 1498 aa23.5■■□□□ 1.35
GATA3-201ENST00000346208 MSH5O43196 834 aa23.45■■□□□ 1.34
GATA3-201ENST00000346208 NACADO15069 1562 aa23.44■■□□□ 1.34
GATA3-201ENST00000346208 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
GATA3-201ENST00000346208 DHX57Q6P158 1386 aaKnown RBP23.37■■□□□ 1.33
GATA3-201ENST00000346208 ITGAEP38570 1179 aa23.36■■□□□ 1.33
GATA3-201ENST00000346208 SMARCA2P51531 1590 aa23.36■■□□□ 1.33
GATA3-201ENST00000346208 APLP2Q06481 763 aa23.35■■□□□ 1.33
GATA3-201ENST00000346208 CLIP1P30622 1438 aa23.34■■□□□ 1.33
GATA3-201ENST00000346208 VPS8Q8N3P4 1428 aa23.31■■□□□ 1.32
GATA3-201ENST00000346208 NEFLP07196 543 aa23.28■■□□□ 1.32
GATA3-201ENST00000346208 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
GATA3-201ENST00000346208 RANGAP1P46060 587 aaPredicted RBP23.21■■□□□ 1.31
GATA3-201ENST00000346208 ERICH6Q7L0X2 663 aa23.2■■□□□ 1.3
GATA3-201ENST00000346208 KIF21BO75037 1637 aa23.16■■□□□ 1.3
GATA3-201ENST00000346208 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
GATA3-201ENST00000346208 FANCIQ9NVI1 1328 aa23.15■■□□□ 1.3
GATA3-201ENST00000346208 DEKP35659 375 aaKnown RBP23.08■■□□□ 1.29
GATA3-201ENST00000346208 TRIM52Q96A61 297 aa23.08■■□□□ 1.29
GATA3-201ENST00000346208 RAPGEF2Q9Y4G8 1499 aa23.07■■□□□ 1.28
GATA3-201ENST00000346208 DDX10Q13206 875 aaKnown RBP23.05■■□□□ 1.28
GATA3-201ENST00000346208 BAZ1BQ9UIG0 1483 aaKnown RBP23.04■■□□□ 1.28
GATA3-201ENST00000346208 SYNJ1O43426 1573 aa23■■□□□ 1.27
GATA3-201ENST00000346208 KANK4Q5T7N3 995 aaPredicted RBP23■■□□□ 1.27
GATA3-201ENST00000346208 ANO8Q9HCE9 1232 aaPredicted RBP22.99■■□□□ 1.27
GATA3-201ENST00000346208 MYT1LQ9UL68 1186 aa22.98■■□□□ 1.27
GATA3-201ENST00000346208 CDK11AQ9UQ88 783 aaPredicted RBP22.97■■□□□ 1.27
GATA3-201ENST00000346208 IRX6P78412 446 aaPredicted RBP22.9■■□□□ 1.26
GATA3-201ENST00000346208 UNC13AQ9UPW8 1703 aa22.89■■□□□ 1.26
GATA3-201ENST00000346208 RRBP1Q9P2E9 1410 aaKnown RBP22.88■■□□□ 1.25
GATA3-201ENST00000346208 PPP1R15AO75807 674 aaPredicted RBP22.87■■□□□ 1.25
GATA3-201ENST00000346208 CUX2O14529 1486 aa22.85■■□□□ 1.25
GATA3-201ENST00000346208 CCER2I3L3R5 266 aa22.85■■□□□ 1.25
GATA3-201ENST00000346208 ARAP1Q96P48 1450 aa22.83■■□□□ 1.25
GATA3-201ENST00000346208 MAPKBP1O60336 1514 aa22.82■■□□□ 1.24
GATA3-201ENST00000346208 WDR97A6NE52 1622 aa22.82■■□□□ 1.24
GATA3-201ENST00000346208 ANP32CO43423 234 aa22.8■■□□□ 1.24
GATA3-201ENST00000346208 CCNB3Q8WWL7 1395 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms