RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 TPRXLQ17RH7 258 aa4.82□□□□□ -1.64
SP140-201ENST00000343805 RYR3Q15413 4870 aa4.81□□□□□ -1.64
SP140-201ENST00000343805 SMR3BP02814 79 aaPredicted RBP4.81□□□□□ -1.64
SP140-201ENST00000343805 CAMK2N1Q7Z7J9 78 aa4.81□□□□□ -1.64
SP140-201ENST00000343805 FAT1Q14517 4588 aa4.8□□□□□ -1.64
SP140-201ENST00000343805 SPINK1P00995 79 aa4.78□□□□□ -1.64
SP140-201ENST00000343805 KRTAP1-4P0C5Y4 121 aa4.78□□□□□ -1.64
SP140-201ENST00000343805 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
SP140-201ENST00000343805 RYR2Q92736 4967 aa4.75□□□□□ -1.65
SP140-201ENST00000343805 A0A1B0GU33 70 aa4.74□□□□□ -1.65
SP140-201ENST00000343805 C9orf92A6NGG3 77 aa4.73□□□□□ -1.65
SP140-201ENST00000343805 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
SP140-201ENST00000343805 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
SP140-201ENST00000343805 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
SP140-201ENST00000343805 DYNC1H1Q14204 4646 aaKnown RBP4.71□□□□□ -1.65
SP140-201ENST00000343805 H1FX-AS1Q4G0G2 97 aa4.71□□□□□ -1.66
SP140-201ENST00000343805 FLG2Q5D862 2391 aaPredicted RBP4.7□□□□□ -1.66
SP140-201ENST00000343805 DMBT1Q9UGM3 2413 aaPredicted RBP4.67□□□□□ -1.66
SP140-201ENST00000343805 EPPK1P58107 5090 aaKnown RBP4.66□□□□□ -1.66
SP140-201ENST00000343805 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.66
SP140-201ENST00000343805 COX6B2Q6YFQ2 88 aa4.63□□□□□ -1.67
SP140-201ENST00000343805 MYCBP2O75592 4640 aa4.62□□□□□ -1.67
SP140-201ENST00000343805 LRP1Q07954 4544 aaKnown RBP4.62□□□□□ -1.67
SP140-201ENST00000343805 APOBP04114 4563 aaKnown RBP4.6□□□□□ -1.67
SP140-201ENST00000343805 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
SP140-201ENST00000343805 KIAA1109Q2LD37 5005 aa4.58□□□□□ -1.68
SP140-201ENST00000343805 RPL37P61927 97 aaKnown RBP4.58□□□□□ -1.68
SP140-201ENST00000343805 XP32Q5T750 250 aa4.57□□□□□ -1.68
SP140-201ENST00000343805 RPS29P62273 56 aaKnown RBP4.53□□□□□ -1.68
SP140-201ENST00000343805 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
SP140-201ENST00000343805 PRO2289Q9P1D8 64 aa4.52□□□□□ -1.69
SP140-201ENST00000343805 PKHD1L1Q86WI1 4243 aa4.52□□□□□ -1.69
SP140-201ENST00000343805 HSPG2P98160 4391 aa4.51□□□□□ -1.69
SP140-201ENST00000343805 A0A1B0GVY2 172 aa4.49□□□□□ -1.69
SP140-201ENST00000343805 KRTAP10-4P60372 401 aaPredicted RBP4.49□□□□□ -1.69
SP140-201ENST00000343805 PLAC4Q8WY50 150 aa4.49□□□□□ -1.69
SP140-201ENST00000343805 FAT3Q8TDW7 4589 aa4.47□□□□□ -1.69
SP140-201ENST00000343805 KRTAP17-1Q9BYP8 105 aa4.45□□□□□ -1.7
SP140-201ENST00000343805 RYR1P21817 5038 aa4.43□□□□□ -1.7
SP140-201ENST00000343805 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
SP140-201ENST00000343805 TNXBP22105 4242 aa4.41□□□□□ -1.7
SP140-201ENST00000343805 LPAP08519 4548 aa4.41□□□□□ -1.7
SP140-201ENST00000343805 Q5VSD8 79 aa4.41□□□□□ -1.7
SP140-201ENST00000343805 A0A0D9SG42 100 aa4.39□□□□□ -1.71
SP140-201ENST00000343805 KRTAP10-8P60410 259 aa4.37□□□□□ -1.71
SP140-201ENST00000343805 LRP2P98164 4655 aa4.37□□□□□ -1.71
SP140-201ENST00000343805 ABCA13Q86UQ4 5058 aa4.35□□□□□ -1.71
SP140-201ENST00000343805 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
SP140-201ENST00000343805 S4R3F8 94 aa4.35□□□□□ -1.71
SP140-201ENST00000343805 BIRC6Q9NR09 4857 aa4.34□□□□□ -1.71
SP140-201ENST00000343805 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
SP140-201ENST00000343805 R4GN34 69 aa4.32□□□□□ -1.72
SP140-201ENST00000343805 HERC2O95714 4834 aa4.31□□□□□ -1.72
SP140-201ENST00000343805 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
SP140-201ENST00000343805 KRTAP9-3Q9BYQ3 159 aa4.29□□□□□ -1.72
SP140-201ENST00000343805 PCLOQ9Y6V0 5065 aa4.29□□□□□ -1.72
SP140-201ENST00000343805 INE1O15225 51 aa4.28□□□□□ -1.72
SP140-201ENST00000343805 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
SP140-201ENST00000343805 HERC1Q15751 4861 aa4.23□□□□□ -1.73
SP140-201ENST00000343805 MT1HL1P0DM35 61 aa4.22□□□□□ -1.73
SP140-201ENST00000343805 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
SP140-201ENST00000343805 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
SP140-201ENST00000343805 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
SP140-201ENST00000343805 MUC2Q02817 5179 aa4.13□□□□□ -1.75
SP140-201ENST00000343805 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
SP140-201ENST00000343805 M0QZ58 72 aa4.07□□□□□ -1.76
SP140-201ENST00000343805 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
SP140-201ENST00000343805 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
SP140-201ENST00000343805 MUC17Q685J3 4493 aa4.01□□□□□ -1.77
SP140-201ENST00000343805 UBR4Q5T4S7 5183 aa4.01□□□□□ -1.77
SP140-201ENST00000343805 KRTAP4-1Q9BYQ7 146 aa4□□□□□ -1.77
SP140-201ENST00000343805 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
SP140-201ENST00000343805 HMCN2Q8NDA2 5059 aa3.98□□□□□ -1.77
SP140-201ENST00000343805 RNF213Q63HN8 5207 aa3.98□□□□□ -1.77
SP140-201ENST00000343805 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
SP140-201ENST00000343805 KRTAP9-2Q9BYQ4 174 aa3.94□□□□□ -1.78
SP140-201ENST00000343805 FAT4Q6V0I7 4981 aa3.92□□□□□ -1.78
SP140-201ENST00000343805 KRTAP4-8Q9BYQ9 185 aa3.86□□□□□ -1.79
SP140-201ENST00000343805 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
SP140-201ENST00000343805 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
SP140-201ENST00000343805 LCE3BQ5TA77 95 aa3.8□□□□□ -1.8
SP140-201ENST00000343805 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
SP140-201ENST00000343805 FLGP20930 4061 aaPredicted RBP3.8□□□□□ -1.8
SP140-201ENST00000343805 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
SP140-201ENST00000343805 M0R2T5 61 aa3.72□□□□□ -1.81
SP140-201ENST00000343805 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
SP140-201ENST00000343805 TNP1P09430 55 aa3.65□□□□□ -1.83
SP140-201ENST00000343805 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
SP140-201ENST00000343805 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
SP140-201ENST00000343805 KRTAP10-10P60014 251 aa3.58□□□□□ -1.84
SP140-201ENST00000343805 MT1HP80294 61 aa3.54□□□□□ -1.84
SP140-201ENST00000343805 MT1FP04733 61 aa3.52□□□□□ -1.85
SP140-201ENST00000343805 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
SP140-201ENST00000343805 MT3P25713 68 aa3.52□□□□□ -1.85
SP140-201ENST00000343805 SPRR2GQ9BYE4 73 aa3.52□□□□□ -1.85
SP140-201ENST00000343805 MT2AP02795 61 aa3.5□□□□□ -1.85
SP140-201ENST00000343805 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
SP140-201ENST00000343805 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
SP140-201ENST00000343805 USH2AO75445 5202 aa3.46□□□□□ -1.86
SP140-201ENST00000343805 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms