RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 TNXBP22105 4242 aa5.83□□□□□ -1.48
CAPRIN1-201ENST00000341394 FAT3Q8TDW7 4589 aa5.78□□□□□ -1.48
CAPRIN1-201ENST00000341394 H1FX-AS1Q4G0G2 97 aa5.76□□□□□ -1.49
CAPRIN1-201ENST00000341394 COX6B2Q6YFQ2 88 aa5.76□□□□□ -1.49
CAPRIN1-201ENST00000341394 ABCA13Q86UQ4 5058 aa5.73□□□□□ -1.49
CAPRIN1-201ENST00000341394 C10orf95Q9H7T3 257 aa5.73□□□□□ -1.49
CAPRIN1-201ENST00000341394 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
CAPRIN1-201ENST00000341394 ASB16-AS1Q495Z4 193 aa5.71□□□□□ -1.5
CAPRIN1-201ENST00000341394 S4R3F8 94 aa5.68□□□□□ -1.5
CAPRIN1-201ENST00000341394 ROMO1P60602 79 aa5.67□□□□□ -1.5
CAPRIN1-201ENST00000341394 KRTAP25-1Q3LHN0 102 aa5.67□□□□□ -1.5
CAPRIN1-201ENST00000341394 NDUFAF8A1L188 74 aa5.67□□□□□ -1.5
CAPRIN1-201ENST00000341394 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
CAPRIN1-201ENST00000341394 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
CAPRIN1-201ENST00000341394 CAMK2N1Q7Z7J9 78 aa5.65□□□□□ -1.5
CAPRIN1-201ENST00000341394 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
CAPRIN1-201ENST00000341394 A8MUU9 505 aa5.64□□□□□ -1.51
CAPRIN1-201ENST00000341394 H0YAA0 97 aa5.63□□□□□ -1.51
CAPRIN1-201ENST00000341394 R4GN34 69 aa5.62□□□□□ -1.51
CAPRIN1-201ENST00000341394 HERC2O95714 4834 aa5.62□□□□□ -1.51
CAPRIN1-201ENST00000341394 M0QZ58 72 aa5.6□□□□□ -1.51
CAPRIN1-201ENST00000341394 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.51
CAPRIN1-201ENST00000341394 LPAP08519 4548 aa5.59□□□□□ -1.51
CAPRIN1-201ENST00000341394 PCLOQ9Y6V0 5065 aa5.58□□□□□ -1.52
CAPRIN1-201ENST00000341394 M0R2T5 61 aa5.55□□□□□ -1.52
CAPRIN1-201ENST00000341394 KRTAP16-1A8MUX0 517 aa5.54□□□□□ -1.52
CAPRIN1-201ENST00000341394 LUZP6Q538Z0 58 aa5.54□□□□□ -1.52
CAPRIN1-201ENST00000341394 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
CAPRIN1-201ENST00000341394 LRP2P98164 4655 aa5.53□□□□□ -1.52
CAPRIN1-201ENST00000341394 KRTAP13-3Q3SY46 172 aa5.5□□□□□ -1.53
CAPRIN1-201ENST00000341394 HERC1Q15751 4861 aa5.49□□□□□ -1.53
CAPRIN1-201ENST00000341394 P0C880 135 aa5.47□□□□□ -1.53
CAPRIN1-201ENST00000341394 C20orf166-AS1Q96NR2 134 aa5.43□□□□□ -1.54
CAPRIN1-201ENST00000341394 XP32Q5T750 250 aa5.41□□□□□ -1.54
CAPRIN1-201ENST00000341394 MUC2Q02817 5179 aa5.38□□□□□ -1.55
CAPRIN1-201ENST00000341394 TPRXLQ17RH7 258 aa5.36□□□□□ -1.55
CAPRIN1-201ENST00000341394 KRTAP3-1Q9BYR8 98 aa5.35□□□□□ -1.55
CAPRIN1-201ENST00000341394 SEC61BP60468 96 aaKnown RBP5.31□□□□□ -1.56
CAPRIN1-201ENST00000341394 KRTAP13-4Q3LI77 160 aa5.27□□□□□ -1.57
CAPRIN1-201ENST00000341394 HMCN2Q8NDA2 5059 aa5.27□□□□□ -1.57
CAPRIN1-201ENST00000341394 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
CAPRIN1-201ENST00000341394 A0A0A0MQY5 61 aa5.25□□□□□ -1.57
CAPRIN1-201ENST00000341394 MUC17Q685J3 4493 aa5.22□□□□□ -1.57
CAPRIN1-201ENST00000341394 RNF213Q63HN8 5207 aa5.2□□□□□ -1.58
CAPRIN1-201ENST00000341394 PLAC4Q8WY50 150 aa5.19□□□□□ -1.58
CAPRIN1-201ENST00000341394 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
CAPRIN1-201ENST00000341394 KRTAP4-1Q9BYQ7 146 aa5.12□□□□□ -1.59
CAPRIN1-201ENST00000341394 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
CAPRIN1-201ENST00000341394 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
CAPRIN1-201ENST00000341394 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
CAPRIN1-201ENST00000341394 TNP1P09430 55 aa5.01□□□□□ -1.61
CAPRIN1-201ENST00000341394 KRTAP3-3Q9BYR6 98 aa5□□□□□ -1.61
CAPRIN1-201ENST00000341394 KRTAP3-2Q9BYR7 98 aa4.97□□□□□ -1.61
CAPRIN1-201ENST00000341394 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.62
CAPRIN1-201ENST00000341394 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
CAPRIN1-201ENST00000341394 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
CAPRIN1-201ENST00000341394 LORP23490 312 aaPredicted RBP4.86□□□□□ -1.63
CAPRIN1-201ENST00000341394 KRTAP10-10P60014 251 aa4.83□□□□□ -1.64
CAPRIN1-201ENST00000341394 LCE2CQ5TA81 110 aa4.8□□□□□ -1.64
CAPRIN1-201ENST00000341394 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
CAPRIN1-201ENST00000341394 MT1HP80294 61 aa4.68□□□□□ -1.66
CAPRIN1-201ENST00000341394 MT2AP02795 61 aa4.52□□□□□ -1.69
CAPRIN1-201ENST00000341394 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
CAPRIN1-201ENST00000341394 USH2AO75445 5202 aa4.51□□□□□ -1.69
CAPRIN1-201ENST00000341394 MT1FP04733 61 aa4.5□□□□□ -1.69
CAPRIN1-201ENST00000341394 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
CAPRIN1-201ENST00000341394 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
CAPRIN1-201ENST00000341394 LCE2AQ5TA79 106 aaPredicted RBP4.43□□□□□ -1.7
CAPRIN1-201ENST00000341394 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.71
CAPRIN1-201ENST00000341394 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
CAPRIN1-201ENST00000341394 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
CAPRIN1-201ENST00000341394 FSIP2Q5CZC0 6907 aa4.35□□□□□ -1.71
CAPRIN1-201ENST00000341394 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
CAPRIN1-201ENST00000341394 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
CAPRIN1-201ENST00000341394 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
CAPRIN1-201ENST00000341394 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
CAPRIN1-201ENST00000341394 LCE2BO14633 110 aa4.27□□□□□ -1.73
CAPRIN1-201ENST00000341394 MT1BP07438 61 aa4.26□□□□□ -1.73
CAPRIN1-201ENST00000341394 KRTAP19-8Q3LI54 63 aa4.24□□□□□ -1.73
CAPRIN1-201ENST00000341394 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
CAPRIN1-201ENST00000341394 KMT2DO14686 5537 aa4.21□□□□□ -1.74
CAPRIN1-201ENST00000341394 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
CAPRIN1-201ENST00000341394 MT1XP80297 61 aa4.14□□□□□ -1.75
CAPRIN1-201ENST00000341394 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
CAPRIN1-201ENST00000341394 INE1O15225 51 aa4.03□□□□□ -1.76
CAPRIN1-201ENST00000341394 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
CAPRIN1-201ENST00000341394 LCE2DQ5TA82 110 aaPredicted RBP3.97□□□□□ -1.77
CAPRIN1-201ENST00000341394 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
CAPRIN1-201ENST00000341394 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
CAPRIN1-201ENST00000341394 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
CAPRIN1-201ENST00000341394 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
CAPRIN1-201ENST00000341394 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
CAPRIN1-201ENST00000341394 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
CAPRIN1-201ENST00000341394 KRTAP4-8A0A0G2JLE6 195 aa3.92□□□□□ -1.78
CAPRIN1-201ENST00000341394 KRTAP4-8Q9BYQ9 185 aa3.92□□□□□ -1.78
CAPRIN1-201ENST00000341394 KRTAP19-6Q3LI70 58 aa3.9□□□□□ -1.78
CAPRIN1-201ENST00000341394 KRTAP8-1Q8IUC2 63 aa3.86□□□□□ -1.79
CAPRIN1-201ENST00000341394 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
CAPRIN1-201ENST00000341394 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
CAPRIN1-201ENST00000341394 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms