RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 H0YAA0 97 aa7.63□□□□□ -1.19
TDP2-201ENST00000341060 BIRC6Q9NR09 4857 aa7.61□□□□□ -1.19
TDP2-201ENST00000341060 ADM2Q7Z4H4 148 aa7.61□□□□□ -1.19
TDP2-201ENST00000341060 PRAC1Q96KF2 57 aa7.6□□□□□ -1.19
TDP2-201ENST00000341060 A0A1B0GU33 70 aa7.6□□□□□ -1.19
TDP2-201ENST00000341060 RPL37P61927 97 aaKnown RBP7.58□□□□□ -1.2
TDP2-201ENST00000341060 H1FX-AS1Q4G0G2 97 aa7.57□□□□□ -1.2
TDP2-201ENST00000341060 DMBT1Q9UGM3 2413 aaPredicted RBP7.54□□□□□ -1.2
TDP2-201ENST00000341060 XP32Q5T750 250 aa7.54□□□□□ -1.2
TDP2-201ENST00000341060 ABCA13Q86UQ4 5058 aa7.54□□□□□ -1.2
TDP2-201ENST00000341060 HERC2O95714 4834 aa7.52□□□□□ -1.21
TDP2-201ENST00000341060 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
TDP2-201ENST00000341060 KRTAP3-3Q9BYR6 98 aa7.47□□□□□ -1.21
TDP2-201ENST00000341060 CSAG1Q6PB30 78 aa7.41□□□□□ -1.22
TDP2-201ENST00000341060 S4R3F8 94 aa7.4□□□□□ -1.22
TDP2-201ENST00000341060 KRTAP10-6P60371 365 aaPredicted RBP7.39□□□□□ -1.23
TDP2-201ENST00000341060 LINC01554Q52M75 96 aa7.38□□□□□ -1.23
TDP2-201ENST00000341060 K7ERS5 55 aa7.34□□□□□ -1.23
TDP2-201ENST00000341060 PCLOQ9Y6V0 5065 aa7.34□□□□□ -1.23
TDP2-201ENST00000341060 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
TDP2-201ENST00000341060 J3QL48 77 aa7.33□□□□□ -1.24
TDP2-201ENST00000341060 TPRXLQ17RH7 258 aa7.3□□□□□ -1.24
TDP2-201ENST00000341060 KRTAP13-4Q3LI77 160 aa7.3□□□□□ -1.24
TDP2-201ENST00000341060 LPAP08519 4548 aa7.25□□□□□ -1.25
TDP2-201ENST00000341060 KRTAP25-1Q3LHN0 102 aa7.24□□□□□ -1.25
TDP2-201ENST00000341060 P0C880 135 aa7.24□□□□□ -1.25
TDP2-201ENST00000341060 LRP2P98164 4655 aa7.23□□□□□ -1.25
TDP2-201ENST00000341060 HERC1Q15751 4861 aa7.21□□□□□ -1.26
TDP2-201ENST00000341060 A0A0D9SG42 100 aa7.2□□□□□ -1.26
TDP2-201ENST00000341060 ROMO1P60602 79 aa7.17□□□□□ -1.26
TDP2-201ENST00000341060 CRIPTQ9P021 101 aa7.09□□□□□ -1.28
TDP2-201ENST00000341060 KRTAP12-2P59991 146 aa7.06□□□□□ -1.28
TDP2-201ENST00000341060 M0QZ58 72 aa7.04□□□□□ -1.28
TDP2-201ENST00000341060 KRTAP12-1P59990 96 aa7.02□□□□□ -1.29
TDP2-201ENST00000341060 SEC61BP60468 96 aaKnown RBP7□□□□□ -1.29
TDP2-201ENST00000341060 HMCN2Q8NDA2 5059 aa6.99□□□□□ -1.29
TDP2-201ENST00000341060 SPINT4Q6UDR6 99 aa6.97□□□□□ -1.29
TDP2-201ENST00000341060 MUC17Q685J3 4493 aa6.96□□□□□ -1.3
TDP2-201ENST00000341060 KRTAP4-1Q9BYQ7 146 aa6.89□□□□□ -1.31
TDP2-201ENST00000341060 MUC2Q02817 5179 aa6.89□□□□□ -1.31
TDP2-201ENST00000341060 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
TDP2-201ENST00000341060 R4GN34 69 aa6.86□□□□□ -1.31
TDP2-201ENST00000341060 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
TDP2-201ENST00000341060 UBR4Q5T4S7 5183 aa6.78□□□□□ -1.32
TDP2-201ENST00000341060 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
TDP2-201ENST00000341060 RNF213Q63HN8 5207 aa6.71□□□□□ -1.34
TDP2-201ENST00000341060 LCE2DQ5TA82 110 aaPredicted RBP6.68□□□□□ -1.34
TDP2-201ENST00000341060 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
TDP2-201ENST00000341060 H3BS24 57 aa6.59□□□□□ -1.35
TDP2-201ENST00000341060 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
TDP2-201ENST00000341060 FAT4Q6V0I7 4981 aa6.56□□□□□ -1.36
TDP2-201ENST00000341060 CAMK2N1Q7Z7J9 78 aa6.49□□□□□ -1.37
TDP2-201ENST00000341060 LCE2CQ5TA81 110 aa6.44□□□□□ -1.38
TDP2-201ENST00000341060 PP632Q6XCG6 107 aa6.4□□□□□ -1.38
TDP2-201ENST00000341060 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
TDP2-201ENST00000341060 PLAC4Q8WY50 150 aa6.34□□□□□ -1.4
TDP2-201ENST00000341060 MT1HP80294 61 aa6.32□□□□□ -1.4
TDP2-201ENST00000341060 M0R2T5 61 aa6.29□□□□□ -1.4
TDP2-201ENST00000341060 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
TDP2-201ENST00000341060 TNP1P09430 55 aa6.26□□□□□ -1.41
TDP2-201ENST00000341060 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
TDP2-201ENST00000341060 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
TDP2-201ENST00000341060 MT2AP02795 61 aa6.11□□□□□ -1.43
TDP2-201ENST00000341060 MT1FP04733 61 aa6.11□□□□□ -1.43
TDP2-201ENST00000341060 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
TDP2-201ENST00000341060 LCE2AQ5TA79 106 aaPredicted RBP6.08□□□□□ -1.44
TDP2-201ENST00000341060 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
TDP2-201ENST00000341060 LUZP6Q538Z0 58 aa6.02□□□□□ -1.45
TDP2-201ENST00000341060 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
TDP2-201ENST00000341060 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
TDP2-201ENST00000341060 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
TDP2-201ENST00000341060 MT1BP07438 61 aa5.9□□□□□ -1.46
TDP2-201ENST00000341060 KRTAP10-5P60370 271 aa5.87□□□□□ -1.47
TDP2-201ENST00000341060 MT1XP80297 61 aa5.86□□□□□ -1.47
TDP2-201ENST00000341060 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
TDP2-201ENST00000341060 KRTAP8-1Q8IUC2 63 aa5.81□□□□□ -1.48
TDP2-201ENST00000341060 KRTAP10-12P60413 245 aa5.74□□□□□ -1.49
TDP2-201ENST00000341060 USH2AO75445 5202 aa5.72□□□□□ -1.49
TDP2-201ENST00000341060 LCE2BO14633 110 aa5.72□□□□□ -1.49
TDP2-201ENST00000341060 A0A0A0MQY5 61 aa5.68□□□□□ -1.5
TDP2-201ENST00000341060 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
TDP2-201ENST00000341060 PRO2289Q9P1D8 64 aa5.66□□□□□ -1.5
TDP2-201ENST00000341060 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
TDP2-201ENST00000341060 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
TDP2-201ENST00000341060 SSPOA2VEC9 5147 aa5.48□□□□□ -1.53
TDP2-201ENST00000341060 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
TDP2-201ENST00000341060 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
TDP2-201ENST00000341060 KMT2DO14686 5537 aa5.35□□□□□ -1.55
TDP2-201ENST00000341060 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
TDP2-201ENST00000341060 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
TDP2-201ENST00000341060 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
TDP2-201ENST00000341060 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
TDP2-201ENST00000341060 FCGBPQ9Y6R7 5405 aaPredicted RBP5.24□□□□□ -1.57
TDP2-201ENST00000341060 KRTAP19-7Q3SYF9 63 aa5.22□□□□□ -1.57
TDP2-201ENST00000341060 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
TDP2-201ENST00000341060 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
TDP2-201ENST00000341060 INE1O15225 51 aa5.18□□□□□ -1.58
TDP2-201ENST00000341060 CRCT1Q9UGL9 99 aa5.17□□□□□ -1.58
TDP2-201ENST00000341060 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
TDP2-201ENST00000341060 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms