RNA–Protein interactions for RNA: ENST00000340913.10

HNRNPA1-202, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 1 (best) BASIC

Gene HNRNPA1, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-202ENST00000340913 TPRXLQ17RH7 258 aa7.92□□□□□ -1.14
HNRNPA1-202ENST00000340913 FLG2Q5D862 2391 aaPredicted RBP7.91□□□□□ -1.14
HNRNPA1-202ENST00000340913 APOBP04114 4563 aaKnown RBP7.88□□□□□ -1.15
HNRNPA1-202ENST00000340913 PKHD1P08F94 4074 aa7.87□□□□□ -1.15
HNRNPA1-202ENST00000340913 XP32Q5T750 250 aa7.82□□□□□ -1.16
HNRNPA1-202ENST00000340913 DYNC1H1Q14204 4646 aaKnown RBP7.81□□□□□ -1.16
HNRNPA1-202ENST00000340913 KRTAP10-8P60410 259 aa7.81□□□□□ -1.16
HNRNPA1-202ENST00000340913 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
HNRNPA1-202ENST00000340913 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
HNRNPA1-202ENST00000340913 M0QZ58 72 aa7.73□□□□□ -1.17
HNRNPA1-202ENST00000340913 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
HNRNPA1-202ENST00000340913 KRTAP15-1Q3LI76 137 aa7.73□□□□□ -1.17
HNRNPA1-202ENST00000340913 DMBT1Q9UGM3 2413 aaPredicted RBP7.72□□□□□ -1.17
HNRNPA1-202ENST00000340913 DNHD1Q96M86 4753 aa7.72□□□□□ -1.17
HNRNPA1-202ENST00000340913 FAT3Q8TDW7 4589 aa7.67□□□□□ -1.18
HNRNPA1-202ENST00000340913 FAT1Q14517 4588 aa7.66□□□□□ -1.18
HNRNPA1-202ENST00000340913 KRTAP21-3Q3LHN1 58 aa7.62□□□□□ -1.19
HNRNPA1-202ENST00000340913 Q5VSD8 79 aa7.62□□□□□ -1.19
HNRNPA1-202ENST00000340913 NDUFAF8A1L188 74 aa7.62□□□□□ -1.19
HNRNPA1-202ENST00000340913 LRP1Q07954 4544 aaKnown RBP7.6□□□□□ -1.19
HNRNPA1-202ENST00000340913 TNXBP22105 4242 aa7.6□□□□□ -1.19
HNRNPA1-202ENST00000340913 HSPG2P98160 4391 aa7.49□□□□□ -1.21
HNRNPA1-202ENST00000340913 MT1HL1P0DM35 61 aa7.43□□□□□ -1.22
HNRNPA1-202ENST00000340913 R4GN34 69 aa7.43□□□□□ -1.22
HNRNPA1-202ENST00000340913 RYR2Q92736 4967 aa7.37□□□□□ -1.23
HNRNPA1-202ENST00000340913 PLAC4Q8WY50 150 aa7.31□□□□□ -1.24
HNRNPA1-202ENST00000340913 PP632Q6XCG6 107 aa7.24□□□□□ -1.25
HNRNPA1-202ENST00000340913 SEC61BP60468 96 aaKnown RBP7.22□□□□□ -1.25
HNRNPA1-202ENST00000340913 MYCBP2O75592 4640 aa7.21□□□□□ -1.26
HNRNPA1-202ENST00000340913 KRTAP17-1Q9BYP8 105 aa7.2□□□□□ -1.26
HNRNPA1-202ENST00000340913 RYR1P21817 5038 aa7.18□□□□□ -1.26
HNRNPA1-202ENST00000340913 KMT2CQ8NEZ4 4911 aaKnown RBP7.13□□□□□ -1.27
HNRNPA1-202ENST00000340913 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
HNRNPA1-202ENST00000340913 LUZP6Q538Z0 58 aa7.11□□□□□ -1.27
HNRNPA1-202ENST00000340913 CAMK2N1Q7Z7J9 78 aa7.1□□□□□ -1.27
HNRNPA1-202ENST00000340913 LRP2P98164 4655 aa7.07□□□□□ -1.28
HNRNPA1-202ENST00000340913 LPAP08519 4548 aa7.06□□□□□ -1.28
HNRNPA1-202ENST00000340913 A0A0A0MQY5 61 aa6.96□□□□□ -1.3
HNRNPA1-202ENST00000340913 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
HNRNPA1-202ENST00000340913 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
HNRNPA1-202ENST00000340913 TNP1P09430 55 aa6.9□□□□□ -1.3
HNRNPA1-202ENST00000340913 KIAA1109Q2LD37 5005 aa6.89□□□□□ -1.31
HNRNPA1-202ENST00000340913 RYR3Q15413 4870 aa6.89□□□□□ -1.31
HNRNPA1-202ENST00000340913 KRTAP19-2Q3LHN2 52 aa6.89□□□□□ -1.31
HNRNPA1-202ENST00000340913 MUC17Q685J3 4493 aa6.87□□□□□ -1.31
HNRNPA1-202ENST00000340913 J3QL48 77 aa6.8□□□□□ -1.32
HNRNPA1-202ENST00000340913 KRTAP4-5Q9BYR2 181 aa6.77□□□□□ -1.33
HNRNPA1-202ENST00000340913 SPRR5A0A1B0GTR4 108 aa6.76□□□□□ -1.33
HNRNPA1-202ENST00000340913 LCE2BO14633 110 aa6.73□□□□□ -1.33
HNRNPA1-202ENST00000340913 ABCA13Q86UQ4 5058 aa6.7□□□□□ -1.34
HNRNPA1-202ENST00000340913 HERC1Q15751 4861 aa6.58□□□□□ -1.36
HNRNPA1-202ENST00000340913 SPRR2GQ9BYE4 73 aa6.53□□□□□ -1.36
HNRNPA1-202ENST00000340913 EPPK1P58107 5090 aaKnown RBP6.53□□□□□ -1.36
HNRNPA1-202ENST00000340913 FLGP20930 4061 aaPredicted RBP6.52□□□□□ -1.36
HNRNPA1-202ENST00000340913 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
HNRNPA1-202ENST00000340913 LCE3AQ5TA76 89 aa6.4□□□□□ -1.38
HNRNPA1-202ENST00000340913 BIRC6Q9NR09 4857 aa6.38□□□□□ -1.39
HNRNPA1-202ENST00000340913 LCE2CQ5TA81 110 aa6.35□□□□□ -1.39
HNRNPA1-202ENST00000340913 PRO2289Q9P1D8 64 aa6.31□□□□□ -1.4
HNRNPA1-202ENST00000340913 M0R2T5 61 aa6.3□□□□□ -1.4
HNRNPA1-202ENST00000340913 KRTAP8-1Q8IUC2 63 aa6.3□□□□□ -1.4
HNRNPA1-202ENST00000340913 INE1O15225 51 aa6.29□□□□□ -1.4
HNRNPA1-202ENST00000340913 HERC2O95714 4834 aa6.27□□□□□ -1.4
HNRNPA1-202ENST00000340913 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
HNRNPA1-202ENST00000340913 KRTAP10-10P60014 251 aa6.21□□□□□ -1.42
HNRNPA1-202ENST00000340913 KRTAP19-8Q3LI54 63 aa6.2□□□□□ -1.42
HNRNPA1-202ENST00000340913 MT1HP80294 61 aa6.18□□□□□ -1.42
HNRNPA1-202ENST00000340913 MT2AP02795 61 aa6.18□□□□□ -1.42
HNRNPA1-202ENST00000340913 MT1FP04733 61 aa6.16□□□□□ -1.42
HNRNPA1-202ENST00000340913 PCLOQ9Y6V0 5065 aa6.14□□□□□ -1.43
HNRNPA1-202ENST00000340913 MUC2Q02817 5179 aa6.12□□□□□ -1.43
HNRNPA1-202ENST00000340913 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
HNRNPA1-202ENST00000340913 KRTAP10-12P60413 245 aa6.1□□□□□ -1.43
HNRNPA1-202ENST00000340913 KRTAP10-5P60370 271 aa6.09□□□□□ -1.44
HNRNPA1-202ENST00000340913 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
HNRNPA1-202ENST00000340913 MT1XP80297 61 aa6.06□□□□□ -1.44
HNRNPA1-202ENST00000340913 MT1BP07438 61 aa6.04□□□□□ -1.44
HNRNPA1-202ENST00000340913 HMCN2Q8NDA2 5059 aa6□□□□□ -1.45
HNRNPA1-202ENST00000340913 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
HNRNPA1-202ENST00000340913 FAT4Q6V0I7 4981 aa5.88□□□□□ -1.47
HNRNPA1-202ENST00000340913 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
HNRNPA1-202ENST00000340913 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
HNRNPA1-202ENST00000340913 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
HNRNPA1-202ENST00000340913 LCE3CQ5T5A8 94 aa5.78□□□□□ -1.48
HNRNPA1-202ENST00000340913 UBR4Q5T4S7 5183 aa5.77□□□□□ -1.49
HNRNPA1-202ENST00000340913 RNF213Q63HN8 5207 aa5.74□□□□□ -1.49
HNRNPA1-202ENST00000340913 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
HNRNPA1-202ENST00000340913 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
HNRNPA1-202ENST00000340913 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
HNRNPA1-202ENST00000340913 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
HNRNPA1-202ENST00000340913 KRTAP2-1Q9BYU5 128 aa5.51□□□□□ -1.53
HNRNPA1-202ENST00000340913 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
HNRNPA1-202ENST00000340913 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
HNRNPA1-202ENST00000340913 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
HNRNPA1-202ENST00000340913 KRTAP19-7Q3SYF9 63 aa5.39□□□□□ -1.55
HNRNPA1-202ENST00000340913 MT1LQ93083 61 aa5.29□□□□□ -1.56
HNRNPA1-202ENST00000340913 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
HNRNPA1-202ENST00000340913 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.27□□□□□ -1.57
HNRNPA1-202ENST00000340913 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
HNRNPA1-202ENST00000340913 MT1EP04732 61 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms