RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 DMBT1Q9UGM3 2413 aaPredicted RBP10.55□□□□□ -0.72
NHLRC1-201ENST00000340650 C9orf92A6NGG3 77 aa10.54□□□□□ -0.72
NHLRC1-201ENST00000340650 A8MUU9 505 aa10.53□□□□□ -0.72
NHLRC1-201ENST00000340650 MT1HL1P0DM35 61 aa10.52□□□□□ -0.73
NHLRC1-201ENST00000340650 C20orf166-AS1Q96NR2 134 aa10.5□□□□□ -0.73
NHLRC1-201ENST00000340650 KRTAP3-1Q9BYR8 98 aa10.49□□□□□ -0.73
NHLRC1-201ENST00000340650 A0A1B0GU33 70 aa10.47□□□□□ -0.73
NHLRC1-201ENST00000340650 H1FX-AS1Q4G0G2 97 aa10.44□□□□□ -0.74
NHLRC1-201ENST00000340650 ABCA13Q86UQ4 5058 aa10.42□□□□□ -0.74
NHLRC1-201ENST00000340650 BIRC6Q9NR09 4857 aa10.41□□□□□ -0.74
NHLRC1-201ENST00000340650 KRTAP25-1Q3LHN0 102 aa10.37□□□□□ -0.75
NHLRC1-201ENST00000340650 HERC2O95714 4834 aa10.34□□□□□ -0.75
NHLRC1-201ENST00000340650 COX6B2Q6YFQ2 88 aa10.27□□□□□ -0.77
NHLRC1-201ENST00000340650 K7ERS5 55 aa10.21□□□□□ -0.78
NHLRC1-201ENST00000340650 XP32Q5T750 250 aa10.18□□□□□ -0.78
NHLRC1-201ENST00000340650 J3QL48 77 aa10.17□□□□□ -0.78
NHLRC1-201ENST00000340650 H3BS24 57 aa10.15□□□□□ -0.78
NHLRC1-201ENST00000340650 LPAP08519 4548 aa10.14□□□□□ -0.79
NHLRC1-201ENST00000340650 ROMO1P60602 79 aa10.11□□□□□ -0.79
NHLRC1-201ENST00000340650 RPL37P61927 97 aaKnown RBP10.1□□□□□ -0.79
NHLRC1-201ENST00000340650 LRP2P98164 4655 aa10.06□□□□□ -0.8
NHLRC1-201ENST00000340650 KRTAP10-6P60371 365 aaPredicted RBP10.06□□□□□ -0.8
NHLRC1-201ENST00000340650 TPRXLQ17RH7 258 aa10.05□□□□□ -0.8
NHLRC1-201ENST00000340650 PCLOQ9Y6V0 5065 aa10.04□□□□□ -0.8
NHLRC1-201ENST00000340650 KRTAP3-3Q9BYR6 98 aa10.03□□□□□ -0.8
NHLRC1-201ENST00000340650 CRIPTQ9P021 101 aa10.03□□□□□ -0.8
NHLRC1-201ENST00000340650 KRTAP13-4Q3LI77 160 aa9.97□□□□□ -0.81
NHLRC1-201ENST00000340650 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
NHLRC1-201ENST00000340650 HERC1Q15751 4861 aa9.89□□□□□ -0.83
NHLRC1-201ENST00000340650 S4R3F8 94 aa9.88□□□□□ -0.83
NHLRC1-201ENST00000340650 A0A0D9SG42 100 aa9.87□□□□□ -0.83
NHLRC1-201ENST00000340650 P0C880 135 aa9.82□□□□□ -0.84
NHLRC1-201ENST00000340650 HMCN2Q8NDA2 5059 aa9.7□□□□□ -0.86
NHLRC1-201ENST00000340650 SEC61BP60468 96 aaKnown RBP9.7□□□□□ -0.86
NHLRC1-201ENST00000340650 KRTAP12-2P59991 146 aa9.67□□□□□ -0.86
NHLRC1-201ENST00000340650 C10orf95Q9H7T3 257 aa9.67□□□□□ -0.86
NHLRC1-201ENST00000340650 SPINT4Q6UDR6 99 aa9.66□□□□□ -0.86
NHLRC1-201ENST00000340650 MUC17Q685J3 4493 aa9.62□□□□□ -0.87
NHLRC1-201ENST00000340650 KRTAP12-1P59990 96 aa9.61□□□□□ -0.87
NHLRC1-201ENST00000340650 KRTAP4-1Q9BYQ7 146 aa9.6□□□□□ -0.87
NHLRC1-201ENST00000340650 MUC2Q02817 5179 aa9.58□□□□□ -0.88
NHLRC1-201ENST00000340650 KRTAP15-1Q3LI76 137 aa9.54□□□□□ -0.88
NHLRC1-201ENST00000340650 M0QZ58 72 aa9.5□□□□□ -0.89
NHLRC1-201ENST00000340650 UBR4Q5T4S7 5183 aa9.34□□□□□ -0.91
NHLRC1-201ENST00000340650 NDUFAF8A1L188 74 aa9.34□□□□□ -0.91
NHLRC1-201ENST00000340650 KRTAP19-2Q3LHN2 52 aa9.29□□□□□ -0.92
NHLRC1-201ENST00000340650 RNF213Q63HN8 5207 aa9.24□□□□□ -0.93
NHLRC1-201ENST00000340650 FLGP20930 4061 aaPredicted RBP9.16□□□□□ -0.94
NHLRC1-201ENST00000340650 R4GN34 69 aa9.15□□□□□ -0.94
NHLRC1-201ENST00000340650 FAT4Q6V0I7 4981 aa9.14□□□□□ -0.95
NHLRC1-201ENST00000340650 LCE2CQ5TA81 110 aa9.04□□□□□ -0.96
NHLRC1-201ENST00000340650 LORP23490 312 aaPredicted RBP9□□□□□ -0.97
NHLRC1-201ENST00000340650 PLAC4Q8WY50 150 aa8.95□□□□□ -0.98
NHLRC1-201ENST00000340650 MT1HP80294 61 aa8.85□□□□□ -0.99
NHLRC1-201ENST00000340650 M0R2T5 61 aa8.84□□□□□ -0.99
NHLRC1-201ENST00000340650 PP632Q6XCG6 107 aa8.82□□□□□ -1
NHLRC1-201ENST00000340650 CAMK2N1Q7Z7J9 78 aa8.71□□□□□ -1.02
NHLRC1-201ENST00000340650 LUZP6Q538Z0 58 aa8.58□□□□□ -1.04
NHLRC1-201ENST00000340650 MT2AP02795 61 aa8.54□□□□□ -1.04
NHLRC1-201ENST00000340650 KRTAP9-8Q9BYQ0 159 aa8.54□□□□□ -1.04
NHLRC1-201ENST00000340650 MT1FP04733 61 aa8.52□□□□□ -1.05
NHLRC1-201ENST00000340650 KRTAP23-1A1A580 65 aa8.5□□□□□ -1.05
NHLRC1-201ENST00000340650 KRTAP10-10P60014 251 aa8.5□□□□□ -1.05
NHLRC1-201ENST00000340650 TNP1P09430 55 aa8.46□□□□□ -1.05
NHLRC1-201ENST00000340650 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.06
NHLRC1-201ENST00000340650 SPRR2GQ9BYE4 73 aa8.38□□□□□ -1.07
NHLRC1-201ENST00000340650 SPRR5A0A1B0GTR4 108 aa8.37□□□□□ -1.07
NHLRC1-201ENST00000340650 A0A0A0MQY5 61 aa8.36□□□□□ -1.07
NHLRC1-201ENST00000340650 LCE2AQ5TA79 106 aaPredicted RBP8.35□□□□□ -1.07
NHLRC1-201ENST00000340650 KRTAP9-3Q9BYQ3 159 aa8.21□□□□□ -1.09
NHLRC1-201ENST00000340650 KRTAP19-8Q3LI54 63 aa8.11□□□□□ -1.11
NHLRC1-201ENST00000340650 MT1BP07438 61 aa8.06□□□□□ -1.12
NHLRC1-201ENST00000340650 LCE2BO14633 110 aa8.01□□□□□ -1.13
NHLRC1-201ENST00000340650 LCE3AQ5TA76 89 aa7.98□□□□□ -1.13
NHLRC1-201ENST00000340650 USH2AO75445 5202 aa7.96□□□□□ -1.14
NHLRC1-201ENST00000340650 MT1XP80297 61 aa7.85□□□□□ -1.15
NHLRC1-201ENST00000340650 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
NHLRC1-201ENST00000340650 KRTAP8-1Q8IUC2 63 aa7.82□□□□□ -1.16
NHLRC1-201ENST00000340650 PRO2289Q9P1D8 64 aa7.67□□□□□ -1.18
NHLRC1-201ENST00000340650 FSIP2Q5CZC0 6907 aa7.67□□□□□ -1.18
NHLRC1-201ENST00000340650 KRTAP10-7P60409 375 aaPredicted RBP7.59□□□□□ -1.19
NHLRC1-201ENST00000340650 SSPOA2VEC9 5147 aa7.59□□□□□ -1.19
NHLRC1-201ENST00000340650 KRTAP12-3P60328 96 aa7.59□□□□□ -1.19
NHLRC1-201ENST00000340650 INE1O15225 51 aa7.58□□□□□ -1.2
NHLRC1-201ENST00000340650 KRTAP10-12P60413 245 aa7.56□□□□□ -1.2
NHLRC1-201ENST00000340650 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
NHLRC1-201ENST00000340650 KMT2DO14686 5537 aa7.45□□□□□ -1.22
NHLRC1-201ENST00000340650 KRTAP19-6Q3LI70 58 aa7.39□□□□□ -1.23
NHLRC1-201ENST00000340650 KRTAP4-8A0A0G2JLE6 195 aa7.29□□□□□ -1.24
NHLRC1-201ENST00000340650 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
NHLRC1-201ENST00000340650 FCGBPQ9Y6R7 5405 aaPredicted RBP7.23□□□□□ -1.25
NHLRC1-201ENST00000340650 KRTAP9-2Q9BYQ4 174 aa7.2□□□□□ -1.26
NHLRC1-201ENST00000340650 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
NHLRC1-201ENST00000340650 LCE3CQ5T5A8 94 aa7.17□□□□□ -1.26
NHLRC1-201ENST00000340650 KRTAP19-7Q3SYF9 63 aa7□□□□□ -1.29
NHLRC1-201ENST00000340650 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
NHLRC1-201ENST00000340650 MACF1Q9UPN3 7388 aaKnown RBP6.95□□□□□ -1.3
NHLRC1-201ENST00000340650 KRTAP9-6A8MVA2 160 aa6.93□□□□□ -1.3
NHLRC1-201ENST00000340650 MT1EP04732 61 aa6.85□□□□□ -1.31
NHLRC1-201ENST00000340650 KRTAP2-3P0C7H8 128 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms