RNA–Protein interactions for RNA: ENST00000340160.7

TSPAN18-201, Transcript of tetraspanin 18, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN18, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-201ENST00000340160 CAMK2N1Q7Z7J9 78 aa5.09□□□□□ -1.59
TSPAN18-201ENST00000340160 KRTAP3-3Q9BYR6 98 aa5.08□□□□□ -1.6
TSPAN18-201ENST00000340160 KRTAP3-2Q9BYR7 98 aa5.08□□□□□ -1.6
TSPAN18-201ENST00000340160 DNAH2Q9P225 4427 aa5.08□□□□□ -1.6
TSPAN18-201ENST00000340160 BIRC6Q9NR09 4857 aa5.07□□□□□ -1.6
TSPAN18-201ENST00000340160 KMT2CQ8NEZ4 4911 aaKnown RBP5.07□□□□□ -1.6
TSPAN18-201ENST00000340160 FAT2Q9NYQ8 4349 aa5.07□□□□□ -1.6
TSPAN18-201ENST00000340160 FAT1Q14517 4588 aa5.06□□□□□ -1.6
TSPAN18-201ENST00000340160 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
TSPAN18-201ENST00000340160 CRIPTQ9P021 101 aa5.04□□□□□ -1.6
TSPAN18-201ENST00000340160 HYDINQ4G0P3 5121 aa5.03□□□□□ -1.6
TSPAN18-201ENST00000340160 RYR1P21817 5038 aa5.03□□□□□ -1.6
TSPAN18-201ENST00000340160 KRTAP17-1Q9BYP8 105 aa4.97□□□□□ -1.61
TSPAN18-201ENST00000340160 P0C880 135 aa4.96□□□□□ -1.62
TSPAN18-201ENST00000340160 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
TSPAN18-201ENST00000340160 R4GN34 69 aa4.94□□□□□ -1.62
TSPAN18-201ENST00000340160 APOBP04114 4563 aaKnown RBP4.93□□□□□ -1.62
TSPAN18-201ENST00000340160 LYSTQ99698 3801 aa4.93□□□□□ -1.62
TSPAN18-201ENST00000340160 LCE2DQ5TA82 110 aaPredicted RBP4.92□□□□□ -1.62
TSPAN18-201ENST00000340160 A0A0D9SG42 100 aa4.92□□□□□ -1.62
TSPAN18-201ENST00000340160 DNAH8Q96JB1 4490 aa4.91□□□□□ -1.62
TSPAN18-201ENST00000340160 HERC2O95714 4834 aa4.89□□□□□ -1.63
TSPAN18-201ENST00000340160 EPPK1P58107 5090 aaKnown RBP4.85□□□□□ -1.63
TSPAN18-201ENST00000340160 KRTAP3-1Q9BYR8 98 aa4.85□□□□□ -1.63
TSPAN18-201ENST00000340160 PKHD1P08F94 4074 aa4.83□□□□□ -1.64
TSPAN18-201ENST00000340160 HSPG2P98160 4391 aa4.83□□□□□ -1.64
TSPAN18-201ENST00000340160 PKD1P98161 4303 aa4.83□□□□□ -1.64
TSPAN18-201ENST00000340160 HECTD4Q9Y4D8 3996 aa4.82□□□□□ -1.64
TSPAN18-201ENST00000340160 M0QZ58 72 aa4.81□□□□□ -1.64
TSPAN18-201ENST00000340160 VPS13BQ7Z7G8 4022 aa4.81□□□□□ -1.64
TSPAN18-201ENST00000340160 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
TSPAN18-201ENST00000340160 KRTAP10-10P60014 251 aa4.78□□□□□ -1.64
TSPAN18-201ENST00000340160 LRP1Q07954 4544 aaKnown RBP4.74□□□□□ -1.65
TSPAN18-201ENST00000340160 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
TSPAN18-201ENST00000340160 FRAS1Q86XX4 4008 aa4.72□□□□□ -1.65
TSPAN18-201ENST00000340160 C10orf95Q9H7T3 257 aa4.69□□□□□ -1.66
TSPAN18-201ENST00000340160 MYCBP2O75592 4640 aa4.67□□□□□ -1.66
TSPAN18-201ENST00000340160 ABCA13Q86UQ4 5058 aa4.66□□□□□ -1.66
TSPAN18-201ENST00000340160 KRTAP13-4Q3LI77 160 aa4.66□□□□□ -1.66
TSPAN18-201ENST00000340160 KRTAP4-1Q9BYQ7 146 aa4.62□□□□□ -1.67
TSPAN18-201ENST00000340160 FAT3Q8TDW7 4589 aa4.61□□□□□ -1.67
TSPAN18-201ENST00000340160 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
TSPAN18-201ENST00000340160 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
TSPAN18-201ENST00000340160 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
TSPAN18-201ENST00000340160 HERC1Q15751 4861 aa4.55□□□□□ -1.68
TSPAN18-201ENST00000340160 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
TSPAN18-201ENST00000340160 MT1HP80294 61 aa4.49□□□□□ -1.69
TSPAN18-201ENST00000340160 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
TSPAN18-201ENST00000340160 LRP2P98164 4655 aa4.47□□□□□ -1.69
TSPAN18-201ENST00000340160 PKHD1L1Q86WI1 4243 aa4.45□□□□□ -1.7
TSPAN18-201ENST00000340160 TNP1P09430 55 aa4.43□□□□□ -1.7
TSPAN18-201ENST00000340160 TNXBP22105 4242 aa4.43□□□□□ -1.7
TSPAN18-201ENST00000340160 LCE2BO14633 110 aa4.37□□□□□ -1.71
TSPAN18-201ENST00000340160 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
TSPAN18-201ENST00000340160 MT2AP02795 61 aa4.32□□□□□ -1.72
TSPAN18-201ENST00000340160 HMCN2Q8NDA2 5059 aa4.32□□□□□ -1.72
TSPAN18-201ENST00000340160 LPAP08519 4548 aa4.32□□□□□ -1.72
TSPAN18-201ENST00000340160 LCE2CQ5TA81 110 aa4.3□□□□□ -1.72
TSPAN18-201ENST00000340160 MT1FP04733 61 aa4.25□□□□□ -1.73
TSPAN18-201ENST00000340160 KRTAP19-2Q3LHN2 52 aa4.23□□□□□ -1.73
TSPAN18-201ENST00000340160 LORP23490 312 aaPredicted RBP4.22□□□□□ -1.73
TSPAN18-201ENST00000340160 RNF213Q63HN8 5207 aa4.22□□□□□ -1.73
TSPAN18-201ENST00000340160 SPRR2GQ9BYE4 73 aa4.17□□□□□ -1.74
TSPAN18-201ENST00000340160 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
TSPAN18-201ENST00000340160 LCE2AQ5TA79 106 aaPredicted RBP4.16□□□□□ -1.74
TSPAN18-201ENST00000340160 KRTAP9-8Q9BYQ0 159 aa4.16□□□□□ -1.74
TSPAN18-201ENST00000340160 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
TSPAN18-201ENST00000340160 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
TSPAN18-201ENST00000340160 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
TSPAN18-201ENST00000340160 INE1O15225 51 aa4.09□□□□□ -1.75
TSPAN18-201ENST00000340160 KRTAP9-3Q9BYQ3 159 aa4.05□□□□□ -1.76
TSPAN18-201ENST00000340160 KRTAP19-1Q8IUB9 90 aa4.04□□□□□ -1.76
TSPAN18-201ENST00000340160 KRTAP19-8Q3LI54 63 aa4.03□□□□□ -1.76
TSPAN18-201ENST00000340160 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
TSPAN18-201ENST00000340160 KRTAP9-2Q9BYQ4 174 aa4.01□□□□□ -1.77
TSPAN18-201ENST00000340160 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
TSPAN18-201ENST00000340160 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.78
TSPAN18-201ENST00000340160 MUC2Q02817 5179 aa3.95□□□□□ -1.78
TSPAN18-201ENST00000340160 MT1BP07438 61 aa3.92□□□□□ -1.78
TSPAN18-201ENST00000340160 KRTAP8-1Q8IUC2 63 aa3.91□□□□□ -1.78
TSPAN18-201ENST00000340160 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
TSPAN18-201ENST00000340160 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
TSPAN18-201ENST00000340160 KRTAP19-6Q3LI70 58 aa3.81□□□□□ -1.8
TSPAN18-201ENST00000340160 MT1XP80297 61 aa3.79□□□□□ -1.8
TSPAN18-201ENST00000340160 FSIP2Q5CZC0 6907 aa3.78□□□□□ -1.8
TSPAN18-201ENST00000340160 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
TSPAN18-201ENST00000340160 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
TSPAN18-201ENST00000340160 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
TSPAN18-201ENST00000340160 KRTAP10-7P60409 375 aaPredicted RBP3.69□□□□□ -1.82
TSPAN18-201ENST00000340160 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
TSPAN18-201ENST00000340160 SPRR2EP22531 72 aa3.6□□□□□ -1.83
TSPAN18-201ENST00000340160 SPRR2BP35325 72 aa3.6□□□□□ -1.83
TSPAN18-201ENST00000340160 SPRR2AP35326 72 aa3.6□□□□□ -1.83
TSPAN18-201ENST00000340160 KRTAP4-8A0A0G2JLE6 195 aa3.58□□□□□ -1.84
TSPAN18-201ENST00000340160 KRTAP4-8Q9BYQ9 185 aa3.58□□□□□ -1.84
TSPAN18-201ENST00000340160 USH2AO75445 5202 aa3.55□□□□□ -1.84
TSPAN18-201ENST00000340160 KRTAP19-4Q3LI73 84 aa3.54□□□□□ -1.84
TSPAN18-201ENST00000340160 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
TSPAN18-201ENST00000340160 KRTAP9-7A8MTY7 169 aa3.52□□□□□ -1.85
TSPAN18-201ENST00000340160 SPRR2DP22532 72 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms