RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 KRTAP4-7Q9BYR0 210 aa3.73□□□□□ -1.81
CAST-203ENST00000338252 KRTAP9-2Q9BYQ4 174 aa3.73□□□□□ -1.81
CAST-203ENST00000338252 A0A1B0GVY2 172 aa3.72□□□□□ -1.81
CAST-203ENST00000338252 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
CAST-203ENST00000338252 SPINT4Q6UDR6 99 aa3.72□□□□□ -1.81
CAST-203ENST00000338252 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
CAST-203ENST00000338252 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
CAST-203ENST00000338252 TPRXLQ17RH7 258 aa3.71□□□□□ -1.82
CAST-203ENST00000338252 Q6ZRN7 208 aaPredicted RBP3.71□□□□□ -1.82
CAST-203ENST00000338252 K7ERS5 55 aa3.7□□□□□ -1.82
CAST-203ENST00000338252 HSPG2P98160 4391 aa3.69□□□□□ -1.82
CAST-203ENST00000338252 DNAH11Q96DT5 4516 aa3.69□□□□□ -1.82
CAST-203ENST00000338252 DNAH6Q9C0G6 4158 aa3.68□□□□□ -1.82
CAST-203ENST00000338252 DYNC1H1Q14204 4646 aaKnown RBP3.68□□□□□ -1.82
CAST-203ENST00000338252 DNAH2Q9P225 4427 aa3.68□□□□□ -1.82
CAST-203ENST00000338252 UBE2DNLQ8IWF7 75 aa3.67□□□□□ -1.82
CAST-203ENST00000338252 APLNQ9ULZ1 77 aa3.67□□□□□ -1.82
CAST-203ENST00000338252 FAT2Q9NYQ8 4349 aa3.67□□□□□ -1.82
CAST-203ENST00000338252 COX6B2Q6YFQ2 88 aa3.66□□□□□ -1.82
CAST-203ENST00000338252 KRTAP3-1Q9BYR8 98 aa3.66□□□□□ -1.82
CAST-203ENST00000338252 NBDYA0A0U1RRE5 68 aa3.65□□□□□ -1.83
CAST-203ENST00000338252 KRTAP13-2Q52LG2 175 aa3.64□□□□□ -1.83
CAST-203ENST00000338252 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
CAST-203ENST00000338252 LCE2CQ5TA81 110 aa3.63□□□□□ -1.83
CAST-203ENST00000338252 PKD1P98161 4303 aa3.63□□□□□ -1.83
CAST-203ENST00000338252 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
CAST-203ENST00000338252 RPL37P61927 97 aaKnown RBP3.62□□□□□ -1.83
CAST-203ENST00000338252 APOBP04114 4563 aaKnown RBP3.6□□□□□ -1.83
CAST-203ENST00000338252 LCE3BQ5TA77 95 aa3.6□□□□□ -1.83
CAST-203ENST00000338252 MYCBP2O75592 4640 aa3.59□□□□□ -1.83
CAST-203ENST00000338252 LCE2AQ5TA79 106 aaPredicted RBP3.59□□□□□ -1.84
CAST-203ENST00000338252 LRP1BQ9NZR2 4599 aa3.58□□□□□ -1.84
CAST-203ENST00000338252 DNAH5Q8TE73 4624 aa3.58□□□□□ -1.84
CAST-203ENST00000338252 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
CAST-203ENST00000338252 KRTAP10-6P60371 365 aaPredicted RBP3.56□□□□□ -1.84
CAST-203ENST00000338252 LCE2BO14633 110 aa3.54□□□□□ -1.84
CAST-203ENST00000338252 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
CAST-203ENST00000338252 KRTAP1-4P0C5Y4 121 aa3.54□□□□□ -1.84
CAST-203ENST00000338252 Q5VSD8 79 aa3.54□□□□□ -1.84
CAST-203ENST00000338252 RNF213Q63HN8 5207 aa3.53□□□□□ -1.84
CAST-203ENST00000338252 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
CAST-203ENST00000338252 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
CAST-203ENST00000338252 VPS13BQ7Z7G8 4022 aa3.52□□□□□ -1.85
CAST-203ENST00000338252 A0A0D9SG42 100 aa3.52□□□□□ -1.85
CAST-203ENST00000338252 FAT1Q14517 4588 aa3.51□□□□□ -1.85
CAST-203ENST00000338252 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
CAST-203ENST00000338252 S4R3F8 94 aa3.49□□□□□ -1.85
CAST-203ENST00000338252 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
CAST-203ENST00000338252 KRTAP10-2P60368 255 aa3.48□□□□□ -1.85
CAST-203ENST00000338252 SMR3BP02814 79 aaPredicted RBP3.48□□□□□ -1.85
CAST-203ENST00000338252 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
CAST-203ENST00000338252 RPS29P62273 56 aaKnown RBP3.45□□□□□ -1.86
CAST-203ENST00000338252 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
CAST-203ENST00000338252 C9orf92A6NGG3 77 aa3.44□□□□□ -1.86
CAST-203ENST00000338252 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
CAST-203ENST00000338252 PKHD1L1Q86WI1 4243 aa3.43□□□□□ -1.86
CAST-203ENST00000338252 LRP2P98164 4655 aa3.4□□□□□ -1.87
CAST-203ENST00000338252 KRTAP10-1P60331 282 aa3.4□□□□□ -1.87
CAST-203ENST00000338252 CAMK2N1Q7Z7J9 78 aa3.39□□□□□ -1.87
CAST-203ENST00000338252 LRP1Q07954 4544 aaKnown RBP3.38□□□□□ -1.87
CAST-203ENST00000338252 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
CAST-203ENST00000338252 PLAC4Q8WY50 150 aa3.37□□□□□ -1.87
CAST-203ENST00000338252 LORP23490 312 aaPredicted RBP3.32□□□□□ -1.88
CAST-203ENST00000338252 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
CAST-203ENST00000338252 TNXBP22105 4242 aa3.31□□□□□ -1.88
CAST-203ENST00000338252 KRTAP10-8P60410 259 aa3.3□□□□□ -1.88
CAST-203ENST00000338252 M0QZ58 72 aa3.29□□□□□ -1.88
CAST-203ENST00000338252 FAT4Q6V0I7 4981 aa3.29□□□□□ -1.88
CAST-203ENST00000338252 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
CAST-203ENST00000338252 MUC2Q02817 5179 aa3.27□□□□□ -1.89
CAST-203ENST00000338252 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
CAST-203ENST00000338252 KRTAP10-4P60372 401 aaPredicted RBP3.27□□□□□ -1.89
CAST-203ENST00000338252 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
CAST-203ENST00000338252 LPAP08519 4548 aa3.17□□□□□ -1.9
CAST-203ENST00000338252 PP632Q6XCG6 107 aa3.17□□□□□ -1.9
CAST-203ENST00000338252 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.91
CAST-203ENST00000338252 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
CAST-203ENST00000338252 PRO2289Q9P1D8 64 aa3.11□□□□□ -1.91
CAST-203ENST00000338252 R4GN34 69 aa3.11□□□□□ -1.91
CAST-203ENST00000338252 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
CAST-203ENST00000338252 KRTAP9-7A8MTY7 169 aa3.06□□□□□ -1.92
CAST-203ENST00000338252 INE1O15225 51 aa3□□□□□ -1.93
CAST-203ENST00000338252 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
CAST-203ENST00000338252 KRTAP19-1Q8IUB9 90 aa2.94□□□□□ -1.94
CAST-203ENST00000338252 TNP1P09430 55 aa2.92□□□□□ -1.94
CAST-203ENST00000338252 FLGP20930 4061 aaPredicted RBP2.91□□□□□ -1.94
CAST-203ENST00000338252 SYNE2Q8WXH0 6885 aaKnown RBP2.84□□□□□ -1.95
CAST-203ENST00000338252 KRTAP4-1Q9BYQ7 146 aa2.82□□□□□ -1.96
CAST-203ENST00000338252 MT1HP80294 61 aa2.81□□□□□ -1.96
CAST-203ENST00000338252 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
CAST-203ENST00000338252 SSPOA2VEC9 5147 aa2.81□□□□□ -1.96
CAST-203ENST00000338252 FCGBPQ9Y6R7 5405 aaPredicted RBP2.81□□□□□ -1.96
CAST-203ENST00000338252 KRTAP19-2Q3LHN2 52 aa2.8□□□□□ -1.96
CAST-203ENST00000338252 USH2AO75445 5202 aa2.8□□□□□ -1.96
CAST-203ENST00000338252 M0R2T5 61 aa2.79□□□□□ -1.96
CAST-203ENST00000338252 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
CAST-203ENST00000338252 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
CAST-203ENST00000338252 KRTAP8-1Q8IUC2 63 aa2.7□□□□□ -1.98
CAST-203ENST00000338252 KRTAP10-12P60413 245 aa2.68□□□□□ -1.98
CAST-203ENST00000338252 NEBP20929 6669 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms