RNA–Protein interactions for RNA: ENST00000336083.7

RAB6A-202, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB6A, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-202ENST00000336083 TPRXLQ17RH7 258 aa6.48□□□□□ -1.37
RAB6A-202ENST00000336083 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.38
RAB6A-202ENST00000336083 EPPK1P58107 5090 aaKnown RBP6.45□□□□□ -1.38
RAB6A-202ENST00000336083 RYR2Q92736 4967 aa6.44□□□□□ -1.38
RAB6A-202ENST00000336083 FAT1Q14517 4588 aa6.43□□□□□ -1.38
RAB6A-202ENST00000336083 KIAA1109Q2LD37 5005 aa6.4□□□□□ -1.38
RAB6A-202ENST00000336083 KRTAP3-3Q9BYR6 98 aa6.4□□□□□ -1.39
RAB6A-202ENST00000336083 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
RAB6A-202ENST00000336083 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
RAB6A-202ENST00000336083 DYNC1H1Q14204 4646 aaKnown RBP6.34□□□□□ -1.4
RAB6A-202ENST00000336083 S4R3F8 94 aa6.33□□□□□ -1.4
RAB6A-202ENST00000336083 KRTAP10-8P60410 259 aa6.32□□□□□ -1.4
RAB6A-202ENST00000336083 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
RAB6A-202ENST00000336083 PKHD1L1Q86WI1 4243 aa6.28□□□□□ -1.4
RAB6A-202ENST00000336083 KRTAP15-1Q3LI76 137 aa6.28□□□□□ -1.4
RAB6A-202ENST00000336083 APOBP04114 4563 aaKnown RBP6.27□□□□□ -1.41
RAB6A-202ENST00000336083 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
RAB6A-202ENST00000336083 MYCBP2O75592 4640 aa6.25□□□□□ -1.41
RAB6A-202ENST00000336083 HSPG2P98160 4391 aa6.22□□□□□ -1.41
RAB6A-202ENST00000336083 KRTAP12-1P59990 96 aa6.21□□□□□ -1.42
RAB6A-202ENST00000336083 LRP1Q07954 4544 aaKnown RBP6.2□□□□□ -1.42
RAB6A-202ENST00000336083 FAT3Q8TDW7 4589 aa6.18□□□□□ -1.42
RAB6A-202ENST00000336083 XP32Q5T750 250 aa6.17□□□□□ -1.42
RAB6A-202ENST00000336083 RYR1P21817 5038 aa6.14□□□□□ -1.43
RAB6A-202ENST00000336083 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
RAB6A-202ENST00000336083 KRTAP17-1Q9BYP8 105 aa6.12□□□□□ -1.43
RAB6A-202ENST00000336083 TNXBP22105 4242 aa6.09□□□□□ -1.43
RAB6A-202ENST00000336083 KRTAP4-5Q9BYR2 181 aa6.07□□□□□ -1.44
RAB6A-202ENST00000336083 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
RAB6A-202ENST00000336083 M0QZ58 72 aa6.04□□□□□ -1.44
RAB6A-202ENST00000336083 LPAP08519 4548 aa6.03□□□□□ -1.44
RAB6A-202ENST00000336083 PCLOQ9Y6V0 5065 aa6.02□□□□□ -1.45
RAB6A-202ENST00000336083 Q5VSD8 79 aa6□□□□□ -1.45
RAB6A-202ENST00000336083 HERC2O95714 4834 aa5.99□□□□□ -1.45
RAB6A-202ENST00000336083 A0A0A0MQY5 61 aa5.98□□□□□ -1.45
RAB6A-202ENST00000336083 BIRC6Q9NR09 4857 aa5.95□□□□□ -1.46
RAB6A-202ENST00000336083 R4GN34 69 aa5.95□□□□□ -1.46
RAB6A-202ENST00000336083 LRP2P98164 4655 aa5.94□□□□□ -1.46
RAB6A-202ENST00000336083 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
RAB6A-202ENST00000336083 HERC1Q15751 4861 aa5.92□□□□□ -1.46
RAB6A-202ENST00000336083 LORP23490 312 aaPredicted RBP5.83□□□□□ -1.48
RAB6A-202ENST00000336083 LUZP6Q538Z0 58 aa5.8□□□□□ -1.48
RAB6A-202ENST00000336083 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
RAB6A-202ENST00000336083 J3QL48 77 aa5.77□□□□□ -1.49
RAB6A-202ENST00000336083 RNF213Q63HN8 5207 aa5.73□□□□□ -1.49
RAB6A-202ENST00000336083 CAMK2N1Q7Z7J9 78 aa5.72□□□□□ -1.49
RAB6A-202ENST00000336083 MUC2Q02817 5179 aa5.72□□□□□ -1.49
RAB6A-202ENST00000336083 UBR4Q5T4S7 5183 aa5.68□□□□□ -1.5
RAB6A-202ENST00000336083 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
RAB6A-202ENST00000336083 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
RAB6A-202ENST00000336083 KRTAP4-1Q9BYQ7 146 aa5.55□□□□□ -1.52
RAB6A-202ENST00000336083 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
RAB6A-202ENST00000336083 TNP1P09430 55 aa5.46□□□□□ -1.54
RAB6A-202ENST00000336083 FAT4Q6V0I7 4981 aa5.46□□□□□ -1.54
RAB6A-202ENST00000336083 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
RAB6A-202ENST00000336083 KRTAP19-2Q3LHN2 52 aa5.38□□□□□ -1.55
RAB6A-202ENST00000336083 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
RAB6A-202ENST00000336083 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
RAB6A-202ENST00000336083 FLGP20930 4061 aaPredicted RBP5.23□□□□□ -1.57
RAB6A-202ENST00000336083 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
RAB6A-202ENST00000336083 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
RAB6A-202ENST00000336083 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
RAB6A-202ENST00000336083 PRO2289Q9P1D8 64 aa5.07□□□□□ -1.6
RAB6A-202ENST00000336083 M0R2T5 61 aa5.05□□□□□ -1.6
RAB6A-202ENST00000336083 SPRR2GQ9BYE4 73 aa5.05□□□□□ -1.6
RAB6A-202ENST00000336083 LCE2CQ5TA81 110 aa4.96□□□□□ -1.61
RAB6A-202ENST00000336083 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
RAB6A-202ENST00000336083 INE1O15225 51 aa4.94□□□□□ -1.62
RAB6A-202ENST00000336083 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
RAB6A-202ENST00000336083 USH2AO75445 5202 aa4.93□□□□□ -1.62
RAB6A-202ENST00000336083 MT1FP04733 61 aa4.89□□□□□ -1.63
RAB6A-202ENST00000336083 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
RAB6A-202ENST00000336083 MT2AP02795 61 aa4.85□□□□□ -1.63
RAB6A-202ENST00000336083 MT1HP80294 61 aa4.83□□□□□ -1.64
RAB6A-202ENST00000336083 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
RAB6A-202ENST00000336083 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
RAB6A-202ENST00000336083 MT1XP80297 61 aa4.8□□□□□ -1.64
RAB6A-202ENST00000336083 MT1BP07438 61 aa4.76□□□□□ -1.65
RAB6A-202ENST00000336083 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
RAB6A-202ENST00000336083 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
RAB6A-202ENST00000336083 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
RAB6A-202ENST00000336083 LCE2DQ5TA82 110 aaPredicted RBP4.69□□□□□ -1.66
RAB6A-202ENST00000336083 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
RAB6A-202ENST00000336083 KMT2DO14686 5537 aa4.59□□□□□ -1.67
RAB6A-202ENST00000336083 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
RAB6A-202ENST00000336083 LCE2AQ5TA79 106 aaPredicted RBP4.56□□□□□ -1.68
RAB6A-202ENST00000336083 KRTAP9-3Q9BYQ3 159 aa4.52□□□□□ -1.69
RAB6A-202ENST00000336083 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
RAB6A-202ENST00000336083 SSPOA2VEC9 5147 aa4.47□□□□□ -1.69
RAB6A-202ENST00000336083 KRTAP4-8A0A0G2JLE6 195 aa4.45□□□□□ -1.7
RAB6A-202ENST00000336083 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
RAB6A-202ENST00000336083 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
RAB6A-202ENST00000336083 LCE2BO14633 110 aa4.38□□□□□ -1.71
RAB6A-202ENST00000336083 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.72
RAB6A-202ENST00000336083 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.72
RAB6A-202ENST00000336083 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.72
RAB6A-202ENST00000336083 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
RAB6A-202ENST00000336083 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
RAB6A-202ENST00000336083 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
RAB6A-202ENST00000336083 FCGBPQ9Y6R7 5405 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms