RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 CSMD2Q7Z408 3487 aa6.84□□□□□ -1.32
PDZD8-201ENST00000334464 KRTAP4-5Q9BYR2 181 aa6.8□□□□□ -1.32
PDZD8-201ENST00000334464 DNAH1Q9P2D7 4330 aa6.78□□□□□ -1.32
PDZD8-201ENST00000334464 HUWE1Q7Z6Z7 4374 aaKnown RBP6.76□□□□□ -1.33
PDZD8-201ENST00000334464 KRTAP19-4Q3LI73 84 aa6.75□□□□□ -1.33
PDZD8-201ENST00000334464 LYSTQ99698 3801 aa6.7□□□□□ -1.34
PDZD8-201ENST00000334464 ANK3Q12955 4377 aaKnown RBP6.7□□□□□ -1.34
PDZD8-201ENST00000334464 DNAH7Q8WXX0 4024 aa6.67□□□□□ -1.34
PDZD8-201ENST00000334464 ZNF469Q96JG9 3925 aaPredicted RBP6.66□□□□□ -1.34
PDZD8-201ENST00000334464 LORP23490 312 aaPredicted RBP6.6□□□□□ -1.35
PDZD8-201ENST00000334464 SPRR2GQ9BYE4 73 aa6.6□□□□□ -1.35
PDZD8-201ENST00000334464 ANK2Q01484 3957 aa6.59□□□□□ -1.35
PDZD8-201ENST00000334464 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
PDZD8-201ENST00000334464 DNAH3Q8TD57 4116 aa6.52□□□□□ -1.37
PDZD8-201ENST00000334464 DNAH2Q9P225 4427 aa6.47□□□□□ -1.37
PDZD8-201ENST00000334464 MT1HP80294 61 aa6.45□□□□□ -1.38
PDZD8-201ENST00000334464 CMYA5Q8N3K9 4069 aa6.45□□□□□ -1.38
PDZD8-201ENST00000334464 HECTD4Q9Y4D8 3996 aa6.45□□□□□ -1.38
PDZD8-201ENST00000334464 LCE3CQ5T5A8 94 aa6.39□□□□□ -1.39
PDZD8-201ENST00000334464 VPS13BQ7Z7G8 4022 aa6.38□□□□□ -1.39
PDZD8-201ENST00000334464 MT2AP02795 61 aa6.37□□□□□ -1.39
PDZD8-201ENST00000334464 SPRR2FQ96RM1 72 aa6.36□□□□□ -1.39
PDZD8-201ENST00000334464 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
PDZD8-201ENST00000334464 KRTAP4-1Q9BYQ7 146 aa6.25□□□□□ -1.41
PDZD8-201ENST00000334464 DNAH6Q9C0G6 4158 aa6.19□□□□□ -1.42
PDZD8-201ENST00000334464 KMT2AQ03164 3969 aa6.19□□□□□ -1.42
PDZD8-201ENST00000334464 DNAH10Q8IVF4 4471 aa6.18□□□□□ -1.42
PDZD8-201ENST00000334464 MT1FP04733 61 aa6.17□□□□□ -1.42
PDZD8-201ENST00000334464 FAT2Q9NYQ8 4349 aa6.04□□□□□ -1.44
PDZD8-201ENST00000334464 DNAH9Q9NYC9 4486 aa6□□□□□ -1.45
PDZD8-201ENST00000334464 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
PDZD8-201ENST00000334464 DNAH11Q96DT5 4516 aa5.99□□□□□ -1.45
PDZD8-201ENST00000334464 FRAS1Q86XX4 4008 aa5.99□□□□□ -1.45
PDZD8-201ENST00000334464 PRKDCP78527 4128 aaKnown RBP5.97□□□□□ -1.45
PDZD8-201ENST00000334464 SPRR2EP22531 72 aa5.96□□□□□ -1.46
PDZD8-201ENST00000334464 SPRR2BP35325 72 aa5.96□□□□□ -1.46
PDZD8-201ENST00000334464 SPRR2AP35326 72 aa5.96□□□□□ -1.46
PDZD8-201ENST00000334464 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
PDZD8-201ENST00000334464 DYNC2H1Q8NCM8 4307 aaKnown RBP5.93□□□□□ -1.46
PDZD8-201ENST00000334464 DNAH5Q8TE73 4624 aa5.9□□□□□ -1.47
PDZD8-201ENST00000334464 FLGP20930 4061 aaPredicted RBP5.88□□□□□ -1.47
PDZD8-201ENST00000334464 LCE2BO14633 110 aa5.86□□□□□ -1.47
PDZD8-201ENST00000334464 LCE3BQ5TA77 95 aa5.86□□□□□ -1.47
PDZD8-201ENST00000334464 DNAH17Q9UFH2 4485 aa5.83□□□□□ -1.48
PDZD8-201ENST00000334464 SPRR2DP22532 72 aa5.82□□□□□ -1.48
PDZD8-201ENST00000334464 LRP1Q07954 4544 aaKnown RBP5.8□□□□□ -1.48
PDZD8-201ENST00000334464 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
PDZD8-201ENST00000334464 MT1XP80297 61 aa5.77□□□□□ -1.49
PDZD8-201ENST00000334464 VPS13DQ5THJ4 4388 aa5.76□□□□□ -1.49
PDZD8-201ENST00000334464 MT1GP13640 62 aa5.76□□□□□ -1.49
PDZD8-201ENST00000334464 DNAH8Q96JB1 4490 aa5.7□□□□□ -1.5
PDZD8-201ENST00000334464 STARD9Q9P2P6 4700 aa5.69□□□□□ -1.5
PDZD8-201ENST00000334464 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
PDZD8-201ENST00000334464 LCE3DQ9BYE3 92 aa5.65□□□□□ -1.5
PDZD8-201ENST00000334464 PLECQ15149 4684 aaKnown RBP5.63□□□□□ -1.51
PDZD8-201ENST00000334464 PKHD1P08F94 4074 aa5.62□□□□□ -1.51
PDZD8-201ENST00000334464 LCE3EQ5T5B0 92 aa5.58□□□□□ -1.52
PDZD8-201ENST00000334464 DYNC1H1Q14204 4646 aaKnown RBP5.56□□□□□ -1.52
PDZD8-201ENST00000334464 MT1BP07438 61 aa5.54□□□□□ -1.52
PDZD8-201ENST00000334464 PKHD1L1Q86WI1 4243 aa5.53□□□□□ -1.52
PDZD8-201ENST00000334464 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
PDZD8-201ENST00000334464 MT1LQ93083 61 aa5.47□□□□□ -1.53
PDZD8-201ENST00000334464 LRP1BQ9NZR2 4599 aa5.47□□□□□ -1.53
PDZD8-201ENST00000334464 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
PDZD8-201ENST00000334464 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
PDZD8-201ENST00000334464 LCE2CQ5TA81 110 aa5.44□□□□□ -1.54
PDZD8-201ENST00000334464 SACSQ9NZJ4 4579 aa5.41□□□□□ -1.54
PDZD8-201ENST00000334464 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
PDZD8-201ENST00000334464 FAT1Q14517 4588 aa5.38□□□□□ -1.55
PDZD8-201ENST00000334464 PKD1P98161 4303 aa5.35□□□□□ -1.55
PDZD8-201ENST00000334464 LCE2DQ5TA82 110 aaPredicted RBP5.31□□□□□ -1.56
PDZD8-201ENST00000334464 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
PDZD8-201ENST00000334464 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
PDZD8-201ENST00000334464 MT3P25713 68 aa5.28□□□□□ -1.56
PDZD8-201ENST00000334464 RYR1P21817 5038 aa5.28□□□□□ -1.56
PDZD8-201ENST00000334464 HSPG2P98160 4391 aa5.28□□□□□ -1.56
PDZD8-201ENST00000334464 MT1EP04732 61 aa5.27□□□□□ -1.57
PDZD8-201ENST00000334464 DNHD1Q96M86 4753 aa5.21□□□□□ -1.58
PDZD8-201ENST00000334464 MT1MQ8N339 61 aa5.14□□□□□ -1.59
PDZD8-201ENST00000334464 RYR3Q15413 4870 aa5.12□□□□□ -1.59
PDZD8-201ENST00000334464 FAT3Q8TDW7 4589 aa5.09□□□□□ -1.59
PDZD8-201ENST00000334464 PRM1P04553 51 aa5.09□□□□□ -1.59
PDZD8-201ENST00000334464 MYCBP2O75592 4640 aa5.06□□□□□ -1.6
PDZD8-201ENST00000334464 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
PDZD8-201ENST00000334464 KRTAP17-1Q9BYP8 105 aa5.03□□□□□ -1.6
PDZD8-201ENST00000334464 MT4P47944 62 aa5.03□□□□□ -1.6
PDZD8-201ENST00000334464 TNXBP22105 4242 aa4.97□□□□□ -1.61
PDZD8-201ENST00000334464 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
PDZD8-201ENST00000334464 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
PDZD8-201ENST00000334464 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
PDZD8-201ENST00000334464 KRTAP19-2Q3LHN2 52 aa4.91□□□□□ -1.62
PDZD8-201ENST00000334464 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
PDZD8-201ENST00000334464 MT1AP04731 61 aa4.85□□□□□ -1.63
PDZD8-201ENST00000334464 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
PDZD8-201ENST00000334464 LRP2P98164 4655 aa4.78□□□□□ -1.64
PDZD8-201ENST00000334464 KRTAP2-3P0C7H8 128 aa4.76□□□□□ -1.65
PDZD8-201ENST00000334464 KRTAP2-4Q9BYR9 128 aa4.76□□□□□ -1.65
PDZD8-201ENST00000334464 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
PDZD8-201ENST00000334464 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
PDZD8-201ENST00000334464 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms