RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 ADM2Q7Z4H4 148 aa9.84□□□□□ -0.83
RFTN1-201ENST00000334133 RPL37P61927 97 aaKnown RBP9.83□□□□□ -0.84
RFTN1-201ENST00000334133 MT1HL1P0DM35 61 aa9.81□□□□□ -0.84
RFTN1-201ENST00000334133 PRAC1Q96KF2 57 aa9.81□□□□□ -0.84
RFTN1-201ENST00000334133 LPAP08519 4548 aa9.81□□□□□ -0.84
RFTN1-201ENST00000334133 H0YAA0 97 aa9.78□□□□□ -0.84
RFTN1-201ENST00000334133 LRP2P98164 4655 aa9.76□□□□□ -0.85
RFTN1-201ENST00000334133 A0A1B0GU33 70 aa9.75□□□□□ -0.85
RFTN1-201ENST00000334133 RBM12B-AS1Q9P1G2 102 aa9.75□□□□□ -0.85
RFTN1-201ENST00000334133 ABCA13Q86UQ4 5058 aa9.71□□□□□ -0.86
RFTN1-201ENST00000334133 H1FX-AS1Q4G0G2 97 aa9.69□□□□□ -0.86
RFTN1-201ENST00000334133 KRTAP4-5Q9BYR2 181 aa9.66□□□□□ -0.86
RFTN1-201ENST00000334133 KRTAP3-3Q9BYR6 98 aa9.66□□□□□ -0.86
RFTN1-201ENST00000334133 S4R3F8 94 aa9.58□□□□□ -0.88
RFTN1-201ENST00000334133 KRTAP10-6P60371 365 aaPredicted RBP9.53□□□□□ -0.88
RFTN1-201ENST00000334133 A0A0D9SG42 100 aa9.48□□□□□ -0.89
RFTN1-201ENST00000334133 KRTAP13-4Q3LI77 160 aa9.48□□□□□ -0.89
RFTN1-201ENST00000334133 CSAG1Q6PB30 78 aa9.48□□□□□ -0.89
RFTN1-201ENST00000334133 KRTAP3-2Q9BYR7 98 aa9.47□□□□□ -0.89
RFTN1-201ENST00000334133 P0C880 135 aa9.46□□□□□ -0.9
RFTN1-201ENST00000334133 TPRXLQ17RH7 258 aa9.45□□□□□ -0.9
RFTN1-201ENST00000334133 CRIPTQ9P021 101 aa9.37□□□□□ -0.91
RFTN1-201ENST00000334133 K7ERS5 55 aa9.32□□□□□ -0.92
RFTN1-201ENST00000334133 HERC2O95714 4834 aa9.32□□□□□ -0.92
RFTN1-201ENST00000334133 J3QL48 77 aa9.26□□□□□ -0.93
RFTN1-201ENST00000334133 LINC01554Q52M75 96 aa9.25□□□□□ -0.93
RFTN1-201ENST00000334133 MUC2Q02817 5179 aa9.18□□□□□ -0.94
RFTN1-201ENST00000334133 KRTAP4-1Q9BYQ7 146 aa9.18□□□□□ -0.94
RFTN1-201ENST00000334133 MUC17Q685J3 4493 aa9.16□□□□□ -0.94
RFTN1-201ENST00000334133 KRTAP12-2P59991 146 aa9.15□□□□□ -0.94
RFTN1-201ENST00000334133 KRTAP25-1Q3LHN0 102 aa9.15□□□□□ -0.95
RFTN1-201ENST00000334133 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
RFTN1-201ENST00000334133 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
RFTN1-201ENST00000334133 ROMO1P60602 79 aa9.11□□□□□ -0.95
RFTN1-201ENST00000334133 KRTAP12-1P59990 96 aa9.04□□□□□ -0.96
RFTN1-201ENST00000334133 HERC1Q15751 4861 aa9□□□□□ -0.97
RFTN1-201ENST00000334133 M0QZ58 72 aa8.99□□□□□ -0.97
RFTN1-201ENST00000334133 C10orf95Q9H7T3 257 aa8.99□□□□□ -0.97
RFTN1-201ENST00000334133 BIRC6Q9NR09 4857 aa8.98□□□□□ -0.97
RFTN1-201ENST00000334133 LORP23490 312 aaPredicted RBP8.97□□□□□ -0.97
RFTN1-201ENST00000334133 R4GN34 69 aa8.93□□□□□ -0.98
RFTN1-201ENST00000334133 PCLOQ9Y6V0 5065 aa8.93□□□□□ -0.98
RFTN1-201ENST00000334133 KRTAP19-2Q3LHN2 52 aa8.86□□□□□ -0.99
RFTN1-201ENST00000334133 FAT4Q6V0I7 4981 aa8.74□□□□□ -1.01
RFTN1-201ENST00000334133 HMCN2Q8NDA2 5059 aa8.73□□□□□ -1.01
RFTN1-201ENST00000334133 FLGP20930 4061 aaPredicted RBP8.65□□□□□ -1.02
RFTN1-201ENST00000334133 RNF213Q63HN8 5207 aa8.62□□□□□ -1.03
RFTN1-201ENST00000334133 UBR4Q5T4S7 5183 aa8.53□□□□□ -1.04
RFTN1-201ENST00000334133 CAMK2N1Q7Z7J9 78 aa8.49□□□□□ -1.05
RFTN1-201ENST00000334133 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
RFTN1-201ENST00000334133 M0R2T5 61 aa8.37□□□□□ -1.07
RFTN1-201ENST00000334133 H3BS24 57 aa8.29□□□□□ -1.08
RFTN1-201ENST00000334133 KRTAP15-1Q3LI76 137 aa8.28□□□□□ -1.08
RFTN1-201ENST00000334133 MT1HP80294 61 aa8.23□□□□□ -1.09
RFTN1-201ENST00000334133 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
RFTN1-201ENST00000334133 NDUFAF8A1L188 74 aa8.13□□□□□ -1.11
RFTN1-201ENST00000334133 KRTAP10-10P60014 251 aa8.11□□□□□ -1.11
RFTN1-201ENST00000334133 MT1FP04733 61 aa8.1□□□□□ -1.11
RFTN1-201ENST00000334133 SPRR2GQ9BYE4 73 aa8.09□□□□□ -1.11
RFTN1-201ENST00000334133 MT2AP02795 61 aa8.07□□□□□ -1.12
RFTN1-201ENST00000334133 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
RFTN1-201ENST00000334133 TNP1P09430 55 aa8.05□□□□□ -1.12
RFTN1-201ENST00000334133 KRTAP9-8Q9BYQ0 159 aa8.01□□□□□ -1.13
RFTN1-201ENST00000334133 PP632Q6XCG6 107 aa8□□□□□ -1.13
RFTN1-201ENST00000334133 MT1BP07438 61 aa7.75□□□□□ -1.17
RFTN1-201ENST00000334133 LCE3AQ5TA76 89 aa7.74□□□□□ -1.17
RFTN1-201ENST00000334133 KRTAP19-8Q3LI54 63 aa7.73□□□□□ -1.17
RFTN1-201ENST00000334133 KRTAP23-1A1A580 65 aa7.68□□□□□ -1.18
RFTN1-201ENST00000334133 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
RFTN1-201ENST00000334133 KRTAP9-3Q9BYQ3 159 aa7.66□□□□□ -1.18
RFTN1-201ENST00000334133 MT1XP80297 61 aa7.65□□□□□ -1.18
RFTN1-201ENST00000334133 USH2AO75445 5202 aa7.65□□□□□ -1.19
RFTN1-201ENST00000334133 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
RFTN1-201ENST00000334133 KRTAP10-7P60409 375 aaPredicted RBP7.5□□□□□ -1.21
RFTN1-201ENST00000334133 LCE2BO14633 110 aa7.46□□□□□ -1.22
RFTN1-201ENST00000334133 KRTAP10-12P60413 245 aa7.44□□□□□ -1.22
RFTN1-201ENST00000334133 SPRR5A0A1B0GTR4 108 aa7.41□□□□□ -1.22
RFTN1-201ENST00000334133 KMT2DO14686 5537 aa7.41□□□□□ -1.22
RFTN1-201ENST00000334133 KRTAP8-1Q8IUC2 63 aa7.41□□□□□ -1.22
RFTN1-201ENST00000334133 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.23
RFTN1-201ENST00000334133 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
RFTN1-201ENST00000334133 PRO2289Q9P1D8 64 aa7.31□□□□□ -1.24
RFTN1-201ENST00000334133 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
RFTN1-201ENST00000334133 FSIP2Q5CZC0 6907 aa7.17□□□□□ -1.26
RFTN1-201ENST00000334133 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
RFTN1-201ENST00000334133 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
RFTN1-201ENST00000334133 KRTAP19-5Q3LI72 72 aa7.14□□□□□ -1.27
RFTN1-201ENST00000334133 SSPOA2VEC9 5147 aa6.97□□□□□ -1.29
RFTN1-201ENST00000334133 LCE3CQ5T5A8 94 aa6.87□□□□□ -1.31
RFTN1-201ENST00000334133 KRTAP19-7Q3SYF9 63 aa6.82□□□□□ -1.32
RFTN1-201ENST00000334133 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
RFTN1-201ENST00000334133 KRTAP9-6A8MVA2 160 aa6.71□□□□□ -1.34
RFTN1-201ENST00000334133 MT1EP04732 61 aa6.62□□□□□ -1.35
RFTN1-201ENST00000334133 KRTAP19-6Q3LI70 58 aa6.61□□□□□ -1.35
RFTN1-201ENST00000334133 FCGBPQ9Y6R7 5405 aaPredicted RBP6.6□□□□□ -1.35
RFTN1-201ENST00000334133 MT1LQ93083 61 aa6.59□□□□□ -1.35
RFTN1-201ENST00000334133 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
RFTN1-201ENST00000334133 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
RFTN1-201ENST00000334133 LCE2DQ5TA82 110 aaPredicted RBP6.38□□□□□ -1.39
RFTN1-201ENST00000334133 DSTQ03001 7570 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms