RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 DNAH9Q9NYC9 4486 aa2.67□□□□□ -1.98
CPEB4-202ENST00000334035 DNAH8Q96JB1 4490 aa2.66□□□□□ -1.98
CPEB4-202ENST00000334035 SPENQ96T58 3664 aaKnown RBP2.66□□□□□ -1.98
CPEB4-202ENST00000334035 MEGF8Q7Z7M0 2845 aa2.66□□□□□ -1.98
CPEB4-202ENST00000334035 KRTAP8-1Q8IUC2 63 aa2.65□□□□□ -1.98
CPEB4-202ENST00000334035 DYNC1H1Q14204 4646 aaKnown RBP2.65□□□□□ -1.99
CPEB4-202ENST00000334035 SACSQ9NZJ4 4579 aa2.64□□□□□ -1.99
CPEB4-202ENST00000334035 CMYA5Q8N3K9 4069 aa2.64□□□□□ -1.99
CPEB4-202ENST00000334035 VPS13CQ709C8 3753 aa2.64□□□□□ -1.99
CPEB4-202ENST00000334035 CUBNO60494 3623 aa2.64□□□□□ -1.99
CPEB4-202ENST00000334035 OTOGQ6ZRI0 2925 aa2.63□□□□□ -1.99
CPEB4-202ENST00000334035 PLECQ15149 4684 aaKnown RBP2.62□□□□□ -1.99
CPEB4-202ENST00000334035 DNAH6Q9C0G6 4158 aa2.61□□□□□ -1.99
CPEB4-202ENST00000334035 TRRAPQ9Y4A5 3859 aa2.61□□□□□ -1.99
CPEB4-202ENST00000334035 PKD1L1Q8TDX9 2849 aa2.61□□□□□ -1.99
CPEB4-202ENST00000334035 KRTAP10-5P60370 271 aa2.6□□□□□ -1.99
CPEB4-202ENST00000334035 DNAH5Q8TE73 4624 aa2.59□□□□□ -1.99
CPEB4-202ENST00000334035 FBN3Q75N90 2809 aa2.59□□□□□ -1.99
CPEB4-202ENST00000334035 DYNC2H1Q8NCM8 4307 aaKnown RBP2.59□□□□□ -2
CPEB4-202ENST00000334035 SRRM2Q9UQ35 2752 aaKnown RBP2.59□□□□□ -2
CPEB4-202ENST00000334035 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
CPEB4-202ENST00000334035 FBN1P35555 2871 aaKnown RBP2.57□□□□□ -2
CPEB4-202ENST00000334035 KRTAP4-1Q9BYQ7 146 aa2.55□□□□□ -2
CPEB4-202ENST00000334035 HSPG2P98160 4391 aa2.55□□□□□ -2
CPEB4-202ENST00000334035 HERC1Q15751 4861 aa2.53□□□□□ -2
CPEB4-202ENST00000334035 APOBP04114 4563 aaKnown RBP2.52□□□□□ -2.01
CPEB4-202ENST00000334035 MT2AP02795 61 aa2.51□□□□□ -2.01
CPEB4-202ENST00000334035 MT1HP80294 61 aa2.5□□□□□ -2.01
CPEB4-202ENST00000334035 KRTAP19-8Q3LI54 63 aa2.5□□□□□ -2.01
CPEB4-202ENST00000334035 KRTAP10-7P60409 375 aaPredicted RBP2.49□□□□□ -2.01
CPEB4-202ENST00000334035 KRTAP19-5Q3LI72 72 aa2.49□□□□□ -2.01
CPEB4-202ENST00000334035 CSMD2Q7Z408 3487 aa2.49□□□□□ -2.01
CPEB4-202ENST00000334035 ANK2Q01484 3957 aa2.48□□□□□ -2.01
CPEB4-202ENST00000334035 DNAH7Q8WXX0 4024 aa2.47□□□□□ -2.01
CPEB4-202ENST00000334035 FAT2Q9NYQ8 4349 aa2.47□□□□□ -2.01
CPEB4-202ENST00000334035 MUC3AQ02505 3323 aa2.47□□□□□ -2.01
CPEB4-202ENST00000334035 STARD9Q9P2P6 4700 aa2.44□□□□□ -2.02
CPEB4-202ENST00000334035 PRKDCP78527 4128 aaKnown RBP2.44□□□□□ -2.02
CPEB4-202ENST00000334035 LRP1BQ9NZR2 4599 aa2.44□□□□□ -2.02
CPEB4-202ENST00000334035 CSMD3Q7Z407 3707 aa2.43□□□□□ -2.02
CPEB4-202ENST00000334035 FAT1Q14517 4588 aa2.43□□□□□ -2.02
CPEB4-202ENST00000334035 MT1FP04733 61 aa2.43□□□□□ -2.02
CPEB4-202ENST00000334035 MYCBP2O75592 4640 aa2.43□□□□□ -2.02
CPEB4-202ENST00000334035 COL7A1Q02388 2944 aa2.42□□□□□ -2.02
CPEB4-202ENST00000334035 SPRR2FQ96RM1 72 aa2.42□□□□□ -2.02
CPEB4-202ENST00000334035 KRTAP19-1Q8IUB9 90 aa2.41□□□□□ -2.02
CPEB4-202ENST00000334035 FRAS1Q86XX4 4008 aa2.4□□□□□ -2.02
CPEB4-202ENST00000334035 FAT3Q8TDW7 4589 aa2.4□□□□□ -2.03
CPEB4-202ENST00000334035 ZNF469Q96JG9 3925 aaPredicted RBP2.39□□□□□ -2.03
CPEB4-202ENST00000334035 VPS13BQ7Z7G8 4022 aa2.38□□□□□ -2.03
CPEB4-202ENST00000334035 MT1XP80297 61 aa2.37□□□□□ -2.03
CPEB4-202ENST00000334035 HECTD4Q9Y4D8 3996 aa2.37□□□□□ -2.03
CPEB4-202ENST00000334035 LRP1Q07954 4544 aaKnown RBP2.37□□□□□ -2.03
CPEB4-202ENST00000334035 SPRR2EP22531 72 aa2.36□□□□□ -2.03
CPEB4-202ENST00000334035 SPRR2BP35325 72 aa2.36□□□□□ -2.03
CPEB4-202ENST00000334035 SPRR2AP35326 72 aa2.36□□□□□ -2.03
CPEB4-202ENST00000334035 KRTAP17-1Q9BYP8 105 aa2.36□□□□□ -2.03
CPEB4-202ENST00000334035 RYR2Q92736 4967 aa2.34□□□□□ -2.04
CPEB4-202ENST00000334035 PKHD1L1Q86WI1 4243 aa2.32□□□□□ -2.04
CPEB4-202ENST00000334035 MT1BP07438 61 aa2.31□□□□□ -2.04
CPEB4-202ENST00000334035 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
CPEB4-202ENST00000334035 KMT2AQ03164 3969 aa2.3□□□□□ -2.04
CPEB4-202ENST00000334035 PKD1P98161 4303 aa2.3□□□□□ -2.04
CPEB4-202ENST00000334035 DNHD1Q96M86 4753 aa2.3□□□□□ -2.04
CPEB4-202ENST00000334035 LCE2BO14633 110 aa2.29□□□□□ -2.04
CPEB4-202ENST00000334035 SPRR2DP22532 72 aa2.29□□□□□ -2.04
CPEB4-202ENST00000334035 LYSTQ99698 3801 aa2.29□□□□□ -2.04
CPEB4-202ENST00000334035 MUC17Q685J3 4493 aa2.25□□□□□ -2.05
CPEB4-202ENST00000334035 RYR1P21817 5038 aa2.25□□□□□ -2.05
CPEB4-202ENST00000334035 LCE3BQ5TA77 95 aa2.24□□□□□ -2.05
CPEB4-202ENST00000334035 KRTAP9-8Q9BYQ0 159 aa2.24□□□□□ -2.05
CPEB4-202ENST00000334035 MT1GP13640 62 aa2.23□□□□□ -2.05
CPEB4-202ENST00000334035 RYR3Q15413 4870 aa2.22□□□□□ -2.05
CPEB4-202ENST00000334035 PKHD1P08F94 4074 aa2.22□□□□□ -2.05
CPEB4-202ENST00000334035 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
CPEB4-202ENST00000334035 MT1LQ93083 61 aa2.21□□□□□ -2.06
CPEB4-202ENST00000334035 KRTAP19-2Q3LHN2 52 aa2.21□□□□□ -2.06
CPEB4-202ENST00000334035 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
CPEB4-202ENST00000334035 LCE2CQ5TA81 110 aa2.2□□□□□ -2.06
CPEB4-202ENST00000334035 KRTAP9-3Q9BYQ3 159 aa2.2□□□□□ -2.06
CPEB4-202ENST00000334035 TNXBP22105 4242 aa2.19□□□□□ -2.06
CPEB4-202ENST00000334035 MT1EP04732 61 aa2.19□□□□□ -2.06
CPEB4-202ENST00000334035 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
CPEB4-202ENST00000334035 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
CPEB4-202ENST00000334035 KRTAP2-1Q9BYU5 128 aa2.17□□□□□ -2.06
CPEB4-202ENST00000334035 KRTAP9-2Q9BYQ4 174 aa2.15□□□□□ -2.07
CPEB4-202ENST00000334035 KRTAP4-8A0A0G2JLE6 195 aa2.14□□□□□ -2.07
CPEB4-202ENST00000334035 KRTAP4-8Q9BYQ9 185 aa2.14□□□□□ -2.07
CPEB4-202ENST00000334035 KRTAP9-6A0A140TA67 174 aa2.12□□□□□ -2.07
CPEB4-202ENST00000334035 KRTAP19-3Q7Z4W3 81 aa2.11□□□□□ -2.07
CPEB4-202ENST00000334035 LCE2AQ5TA79 106 aaPredicted RBP2.1□□□□□ -2.07
CPEB4-202ENST00000334035 BIRC6Q9NR09 4857 aa2.09□□□□□ -2.08
CPEB4-202ENST00000334035 KRTAP4-7Q9BYR0 210 aa2.08□□□□□ -2.08
CPEB4-202ENST00000334035 HERC2O95714 4834 aa2.07□□□□□ -2.08
CPEB4-202ENST00000334035 FLGP20930 4061 aaPredicted RBP2.07□□□□□ -2.08
CPEB4-202ENST00000334035 HYDINQ4G0P3 5121 aa2.07□□□□□ -2.08
CPEB4-202ENST00000334035 LRP2P98164 4655 aa2.07□□□□□ -2.08
CPEB4-202ENST00000334035 PRM1P04553 51 aa2.06□□□□□ -2.08
CPEB4-202ENST00000334035 MT1MQ8N339 61 aa2.04□□□□□ -2.08
CPEB4-202ENST00000334035 MT1AP04731 61 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms