RNA–Protein interactions for RNA: ENST00000333651.10

HMG20B-202, Transcript of high mobility group 20B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20B, Length 1,596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-202ENST00000333651 SERP1Q9Y6X1 66 aa11.61□□□□□ -0.55
HMG20B-202ENST00000333651 KRTAP9-2Q9BYQ4 174 aa11.53□□□□□ -0.56
HMG20B-202ENST00000333651 KRTAP9-8Q9BYQ0 159 aa11.48□□□□□ -0.57
HMG20B-202ENST00000333651 KRTAP3-1Q9BYR8 98 aa11.48□□□□□ -0.57
HMG20B-202ENST00000333651 LCE2DQ5TA82 110 aaPredicted RBP11.45□□□□□ -0.58
HMG20B-202ENST00000333651 MT2AP02795 61 aa11.35□□□□□ -0.59
HMG20B-202ENST00000333651 SMIM26A0A096LP01 95 aa11.34□□□□□ -0.59
HMG20B-202ENST00000333651 S4R3F8 94 aa11.33□□□□□ -0.6
HMG20B-202ENST00000333651 KRTAP10-10P60014 251 aa11.28□□□□□ -0.6
HMG20B-202ENST00000333651 DMAC1Q96GE9 116 aa11.28□□□□□ -0.6
HMG20B-202ENST00000333651 MT1FP04733 61 aa11.27□□□□□ -0.61
HMG20B-202ENST00000333651 LCA10Q71F78 164 aa11.26□□□□□ -0.61
HMG20B-202ENST00000333651 ACYP2P14621 99 aa11.24□□□□□ -0.61
HMG20B-202ENST00000333651 COA5Q86WW8 74 aa11.24□□□□□ -0.61
HMG20B-202ENST00000333651 CSAG1Q6PB30 78 aa11.22□□□□□ -0.61
HMG20B-202ENST00000333651 A8MUN3 132 aa11.21□□□□□ -0.61
HMG20B-202ENST00000333651 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
HMG20B-202ENST00000333651 Q1T7F1 81 aa11.1□□□□□ -0.63
HMG20B-202ENST00000333651 KRTAP9-3Q9BYQ3 159 aa11.1□□□□□ -0.63
HMG20B-202ENST00000333651 V9GYY9 64 aa11.07□□□□□ -0.64
HMG20B-202ENST00000333651 FSIP2Q5CZC0 6907 aa11.04□□□□□ -0.64
HMG20B-202ENST00000333651 CHKB-CPT1BH3BT56 60 aa10.99□□□□□ -0.65
HMG20B-202ENST00000333651 KRTAP9-6A0A140TA67 174 aa10.99□□□□□ -0.65
HMG20B-202ENST00000333651 CRCT1Q9UGL9 99 aa10.98□□□□□ -0.65
HMG20B-202ENST00000333651 LCE2BO14633 110 aa10.94□□□□□ -0.66
HMG20B-202ENST00000333651 LINC01558Q9Y6Z2 57 aa10.9□□□□□ -0.66
HMG20B-202ENST00000333651 SPTSSBQ8NFR3 76 aa10.83□□□□□ -0.68
HMG20B-202ENST00000333651 H0YAA0 97 aa10.82□□□□□ -0.68
HMG20B-202ENST00000333651 USH2AO75445 5202 aa10.8□□□□□ -0.68
HMG20B-202ENST00000333651 PSPHP1O15172 72 aa10.76□□□□□ -0.69
HMG20B-202ENST00000333651 PRR15LQ9BU68 103 aa10.74□□□□□ -0.69
HMG20B-202ENST00000333651 Q5VV11 94 aa10.73□□□□□ -0.69
HMG20B-202ENST00000333651 ADM2Q7Z4H4 148 aa10.73□□□□□ -0.69
HMG20B-202ENST00000333651 KRTAP19-1Q8IUB9 90 aa10.73□□□□□ -0.69
HMG20B-202ENST00000333651 CRIPTQ9P021 101 aa10.7□□□□□ -0.7
HMG20B-202ENST00000333651 SPRR2GQ9BYE4 73 aa10.68□□□□□ -0.7
HMG20B-202ENST00000333651 A0A1B0GU69 56 aa10.63□□□□□ -0.71
HMG20B-202ENST00000333651 SSPOA2VEC9 5147 aa10.6□□□□□ -0.71
HMG20B-202ENST00000333651 SEC61GP60059 68 aa10.55□□□□□ -0.72
HMG20B-202ENST00000333651 P0C880 135 aa10.52□□□□□ -0.72
HMG20B-202ENST00000333651 KRTAP19-8Q3LI54 63 aa10.52□□□□□ -0.72
HMG20B-202ENST00000333651 KRTAP19-6Q3LI70 58 aa10.49□□□□□ -0.73
HMG20B-202ENST00000333651 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
HMG20B-202ENST00000333651 A6NED7 52 aa10.47□□□□□ -0.73
HMG20B-202ENST00000333651 BRK1Q8WUW1 75 aa10.47□□□□□ -0.73
HMG20B-202ENST00000333651 MT1BP07438 61 aa10.45□□□□□ -0.74
HMG20B-202ENST00000333651 R4GN34 69 aa10.44□□□□□ -0.74
HMG20B-202ENST00000333651 PRO0628Q9UI54 55 aa10.41□□□□□ -0.74
HMG20B-202ENST00000333651 UQCR11O14957 56 aa10.39□□□□□ -0.75
HMG20B-202ENST00000333651 CDC42SE1Q9NRR8 79 aa10.38□□□□□ -0.75
HMG20B-202ENST00000333651 M0QZ58 72 aa10.36□□□□□ -0.75
HMG20B-202ENST00000333651 FCGBPQ9Y6R7 5405 aaPredicted RBP10.34□□□□□ -0.75
HMG20B-202ENST00000333651 SPATA8Q6RVD6 105 aa10.3□□□□□ -0.76
HMG20B-202ENST00000333651 A0A1B0GU33 70 aa10.26□□□□□ -0.77
HMG20B-202ENST00000333651 MIR22HGQ0VDD5 57 aa10.24□□□□□ -0.77
HMG20B-202ENST00000333651 A6NN06 94 aa10.22□□□□□ -0.77
HMG20B-202ENST00000333651 A8MU10 97 aa10.2□□□□□ -0.78
HMG20B-202ENST00000333651 LINC01554Q52M75 96 aa10.2□□□□□ -0.78
HMG20B-202ENST00000333651 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.18□□□□□ -0.78
HMG20B-202ENST00000333651 PLAC4Q8WY50 150 aa10.18□□□□□ -0.78
HMG20B-202ENST00000333651 KRTAP10-5P60370 271 aa10.14□□□□□ -0.79
HMG20B-202ENST00000333651 KRTAP13-4Q3LI77 160 aa9.99□□□□□ -0.81
HMG20B-202ENST00000333651 PRO2289Q9P1D8 64 aa9.98□□□□□ -0.81
HMG20B-202ENST00000333651 SVIPQ8NHG7 77 aa9.97□□□□□ -0.81
HMG20B-202ENST00000333651 MACF1Q9UPN3 7388 aaKnown RBP9.96□□□□□ -0.81
HMG20B-202ENST00000333651 PMAIP1Q13794 54 aa9.94□□□□□ -0.82
HMG20B-202ENST00000333651 KRTAP9-7A8MTY7 169 aa9.93□□□□□ -0.82
HMG20B-202ENST00000333651 MT1XP80297 61 aa9.92□□□□□ -0.82
HMG20B-202ENST00000333651 SYNE2Q8WXH0 6885 aaKnown RBP9.81□□□□□ -0.84
HMG20B-202ENST00000333651 K7ERS5 55 aa9.79□□□□□ -0.84
HMG20B-202ENST00000333651 A0A0D9SG42 100 aa9.78□□□□□ -0.84
HMG20B-202ENST00000333651 KRTAP6-3Q3LI67 103 aa9.68□□□□□ -0.86
HMG20B-202ENST00000333651 CAMK2N1Q7Z7J9 78 aa9.67□□□□□ -0.86
HMG20B-202ENST00000333651 SPINT4Q6UDR6 99 aa9.63□□□□□ -0.87
HMG20B-202ENST00000333651 KRTAP12-1P59990 96 aa9.62□□□□□ -0.87
HMG20B-202ENST00000333651 KTN1-AS1Q86SY8 53 aa9.6□□□□□ -0.87
HMG20B-202ENST00000333651 KRTAP12-2P59991 146 aa9.59□□□□□ -0.87
HMG20B-202ENST00000333651 KRTAP10-7P60409 375 aaPredicted RBP9.48□□□□□ -0.89
HMG20B-202ENST00000333651 KRTAP10-12P60413 245 aa9.43□□□□□ -0.9
HMG20B-202ENST00000333651 KRTAP5-9P26371 169 aa9.41□□□□□ -0.9
HMG20B-202ENST00000333651 ROMO1P60602 79 aa9.39□□□□□ -0.91
HMG20B-202ENST00000333651 KMT2DO14686 5537 aa9.38□□□□□ -0.91
HMG20B-202ENST00000333651 KRTAP8-1Q8IUC2 63 aa9.38□□□□□ -0.91
HMG20B-202ENST00000333651 KRTAP4-8A0A0G2JLE6 195 aa9.36□□□□□ -0.91
HMG20B-202ENST00000333651 KRTAP4-8Q9BYQ9 185 aa9.36□□□□□ -0.91
HMG20B-202ENST00000333651 SPRR2FQ96RM1 72 aa9.26□□□□□ -0.93
HMG20B-202ENST00000333651 PRAC1Q96KF2 57 aa9.2□□□□□ -0.94
HMG20B-202ENST00000333651 MUC12Q9UKN1 5478 aa9.18□□□□□ -0.94
HMG20B-202ENST00000333651 C10orf95Q9H7T3 257 aa9.11□□□□□ -0.95
HMG20B-202ENST00000333651 NEBP20929 6669 aa9.1□□□□□ -0.95
HMG20B-202ENST00000333651 KRTAP25-1Q3LHN0 102 aa9.06□□□□□ -0.96
HMG20B-202ENST00000333651 TNP1P09430 55 aa9.03□□□□□ -0.96
HMG20B-202ENST00000333651 SPRR2EP22531 72 aa9.02□□□□□ -0.97
HMG20B-202ENST00000333651 SPRR2BP35325 72 aa9.02□□□□□ -0.97
HMG20B-202ENST00000333651 SPRR2AP35326 72 aa9.02□□□□□ -0.97
HMG20B-202ENST00000333651 MDN1Q9NU22 5596 aa9.02□□□□□ -0.97
HMG20B-202ENST00000333651 LCE1AQ5T7P2 110 aa8.95□□□□□ -0.98
HMG20B-202ENST00000333651 KRTAP19-7Q3SYF9 63 aa8.86□□□□□ -0.99
HMG20B-202ENST00000333651 LCE3AQ5TA76 89 aa8.79□□□□□ -1
HMG20B-202ENST00000333651 KRTAP19-5Q3LI72 72 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms