RNA–Protein interactions for RNA: ENST00000333175.9

TMEM259-201, Transcript of transmembrane protein 259, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM259, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-201ENST00000333175 EPPK1P58107 5090 aaKnown RBP11.54□□□□□ -0.56
TMEM259-201ENST00000333175 COX6B2Q6YFQ2 88 aa11.54□□□□□ -0.56
TMEM259-201ENST00000333175 XP32Q5T750 250 aa11.52□□□□□ -0.57
TMEM259-201ENST00000333175 RPL37P61927 97 aaKnown RBP11.5□□□□□ -0.57
TMEM259-201ENST00000333175 MT1HL1P0DM35 61 aa11.48□□□□□ -0.57
TMEM259-201ENST00000333175 H0YAA0 97 aa11.38□□□□□ -0.59
TMEM259-201ENST00000333175 LPAP08519 4548 aa11.34□□□□□ -0.59
TMEM259-201ENST00000333175 A0A1B0GU33 70 aa11.34□□□□□ -0.59
TMEM259-201ENST00000333175 LRP2P98164 4655 aa11.31□□□□□ -0.6
TMEM259-201ENST00000333175 LINC01554Q52M75 96 aa11.3□□□□□ -0.6
TMEM259-201ENST00000333175 H1FX-AS1Q4G0G2 97 aa11.3□□□□□ -0.6
TMEM259-201ENST00000333175 ABCA13Q86UQ4 5058 aa11.27□□□□□ -0.61
TMEM259-201ENST00000333175 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
TMEM259-201ENST00000333175 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
TMEM259-201ENST00000333175 CSAG1Q6PB30 78 aa11.22□□□□□ -0.61
TMEM259-201ENST00000333175 S4R3F8 94 aa11.18□□□□□ -0.62
TMEM259-201ENST00000333175 KRTAP10-6P60371 365 aaPredicted RBP11.1□□□□□ -0.63
TMEM259-201ENST00000333175 TPRXLQ17RH7 258 aa11.09□□□□□ -0.63
TMEM259-201ENST00000333175 KRTAP3-2Q9BYR7 98 aa11.04□□□□□ -0.64
TMEM259-201ENST00000333175 KRTAP13-4Q3LI77 160 aa11.02□□□□□ -0.65
TMEM259-201ENST00000333175 P0C880 135 aa10.98□□□□□ -0.65
TMEM259-201ENST00000333175 A0A0D9SG42 100 aa10.96□□□□□ -0.66
TMEM259-201ENST00000333175 HERC2O95714 4834 aa10.87□□□□□ -0.67
TMEM259-201ENST00000333175 H3BS24 57 aa10.86□□□□□ -0.67
TMEM259-201ENST00000333175 K7ERS5 55 aa10.85□□□□□ -0.67
TMEM259-201ENST00000333175 KRTAP25-1Q3LHN0 102 aa10.8□□□□□ -0.68
TMEM259-201ENST00000333175 J3QL48 77 aa10.79□□□□□ -0.68
TMEM259-201ENST00000333175 CRIPTQ9P021 101 aa10.75□□□□□ -0.69
TMEM259-201ENST00000333175 MUC17Q685J3 4493 aa10.74□□□□□ -0.69
TMEM259-201ENST00000333175 KRTAP4-1Q9BYQ7 146 aa10.69□□□□□ -0.7
TMEM259-201ENST00000333175 SEC61BP60468 96 aaKnown RBP10.69□□□□□ -0.7
TMEM259-201ENST00000333175 KRTAP12-2P59991 146 aa10.62□□□□□ -0.71
TMEM259-201ENST00000333175 ROMO1P60602 79 aa10.62□□□□□ -0.71
TMEM259-201ENST00000333175 BIRC6Q9NR09 4857 aa10.57□□□□□ -0.72
TMEM259-201ENST00000333175 SPINT4Q6UDR6 99 aa10.57□□□□□ -0.72
TMEM259-201ENST00000333175 MUC2Q02817 5179 aa10.55□□□□□ -0.72
TMEM259-201ENST00000333175 KRTAP12-1P59990 96 aa10.52□□□□□ -0.73
TMEM259-201ENST00000333175 M0QZ58 72 aa10.48□□□□□ -0.73
TMEM259-201ENST00000333175 HERC1Q15751 4861 aa10.44□□□□□ -0.74
TMEM259-201ENST00000333175 PCLOQ9Y6V0 5065 aa10.4□□□□□ -0.75
TMEM259-201ENST00000333175 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
TMEM259-201ENST00000333175 KRTAP19-2Q3LHN2 52 aa10.38□□□□□ -0.75
TMEM259-201ENST00000333175 R4GN34 69 aa10.38□□□□□ -0.75
TMEM259-201ENST00000333175 C10orf95Q9H7T3 257 aa10.36□□□□□ -0.75
TMEM259-201ENST00000333175 HMCN2Q8NDA2 5059 aa10.24□□□□□ -0.77
TMEM259-201ENST00000333175 FLGP20930 4061 aaPredicted RBP10.22□□□□□ -0.77
TMEM259-201ENST00000333175 FAT4Q6V0I7 4981 aa10.05□□□□□ -0.8
TMEM259-201ENST00000333175 KRTAP15-1Q3LI76 137 aa9.95□□□□□ -0.82
TMEM259-201ENST00000333175 NDUFAF8A1L188 74 aa9.92□□□□□ -0.82
TMEM259-201ENST00000333175 RNF213Q63HN8 5207 aa9.92□□□□□ -0.82
TMEM259-201ENST00000333175 UBR4Q5T4S7 5183 aa9.89□□□□□ -0.83
TMEM259-201ENST00000333175 LCE2CQ5TA81 110 aa9.87□□□□□ -0.83
TMEM259-201ENST00000333175 CAMK2N1Q7Z7J9 78 aa9.84□□□□□ -0.83
TMEM259-201ENST00000333175 M0R2T5 61 aa9.7□□□□□ -0.86
TMEM259-201ENST00000333175 MT1HP80294 61 aa9.63□□□□□ -0.87
TMEM259-201ENST00000333175 KRTAP19-1Q8IUB9 90 aa9.51□□□□□ -0.89
TMEM259-201ENST00000333175 SPRR2GQ9BYE4 73 aa9.48□□□□□ -0.89
TMEM259-201ENST00000333175 MT1FP04733 61 aa9.45□□□□□ -0.9
TMEM259-201ENST00000333175 MT2AP02795 61 aa9.43□□□□□ -0.9
TMEM259-201ENST00000333175 KRTAP10-10P60014 251 aa9.43□□□□□ -0.9
TMEM259-201ENST00000333175 PLAC4Q8WY50 150 aa9.39□□□□□ -0.91
TMEM259-201ENST00000333175 TNP1P09430 55 aa9.38□□□□□ -0.91
TMEM259-201ENST00000333175 PP632Q6XCG6 107 aa9.37□□□□□ -0.91
TMEM259-201ENST00000333175 KRTAP9-8Q9BYQ0 159 aa9.36□□□□□ -0.91
TMEM259-201ENST00000333175 A0A0A0MQY5 61 aa9.09□□□□□ -0.95
TMEM259-201ENST00000333175 KRTAP19-8Q3LI54 63 aa9.08□□□□□ -0.96
TMEM259-201ENST00000333175 KRTAP23-1A1A580 65 aa9.06□□□□□ -0.96
TMEM259-201ENST00000333175 MT1BP07438 61 aa9.05□□□□□ -0.96
TMEM259-201ENST00000333175 LCE3AQ5TA76 89 aa9□□□□□ -0.97
TMEM259-201ENST00000333175 LUZP6Q538Z0 58 aa8.97□□□□□ -0.97
TMEM259-201ENST00000333175 KRTAP9-3Q9BYQ3 159 aa8.97□□□□□ -0.97
TMEM259-201ENST00000333175 KRTAP10-5P60370 271 aa8.94□□□□□ -0.98
TMEM259-201ENST00000333175 MT1XP80297 61 aa8.94□□□□□ -0.98
TMEM259-201ENST00000333175 USH2AO75445 5202 aa8.76□□□□□ -1.01
TMEM259-201ENST00000333175 KRTAP10-7P60409 375 aaPredicted RBP8.72□□□□□ -1.01
TMEM259-201ENST00000333175 LCE2BO14633 110 aa8.69□□□□□ -1.02
TMEM259-201ENST00000333175 KRTAP10-12P60413 245 aa8.69□□□□□ -1.02
TMEM259-201ENST00000333175 SPRR5A0A1B0GTR4 108 aa8.68□□□□□ -1.02
TMEM259-201ENST00000333175 KRTAP8-1Q8IUC2 63 aa8.67□□□□□ -1.02
TMEM259-201ENST00000333175 LCE2AQ5TA79 106 aaPredicted RBP8.62□□□□□ -1.03
TMEM259-201ENST00000333175 PRO2289Q9P1D8 64 aa8.57□□□□□ -1.04
TMEM259-201ENST00000333175 KRTAP12-3P60328 96 aa8.54□□□□□ -1.04
TMEM259-201ENST00000333175 KMT2DO14686 5537 aa8.51□□□□□ -1.05
TMEM259-201ENST00000333175 KRTAP19-5Q3LI72 72 aa8.3□□□□□ -1.08
TMEM259-201ENST00000333175 KRTAP4-8A0A0G2JLE6 195 aa8.27□□□□□ -1.08
TMEM259-201ENST00000333175 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.08
TMEM259-201ENST00000333175 FSIP2Q5CZC0 6907 aa8.11□□□□□ -1.11
TMEM259-201ENST00000333175 SSPOA2VEC9 5147 aa8.11□□□□□ -1.11
TMEM259-201ENST00000333175 LCE3CQ5T5A8 94 aa8.01□□□□□ -1.13
TMEM259-201ENST00000333175 KRTAP19-7Q3SYF9 63 aa7.96□□□□□ -1.13
TMEM259-201ENST00000333175 KRTAP4-7Q9BYR0 210 aa7.85□□□□□ -1.15
TMEM259-201ENST00000333175 INE1O15225 51 aa7.79□□□□□ -1.16
TMEM259-201ENST00000333175 KRTAP9-6A8MVA2 160 aa7.78□□□□□ -1.16
TMEM259-201ENST00000333175 KRTAP19-6Q3LI70 58 aa7.78□□□□□ -1.16
TMEM259-201ENST00000333175 MT1EP04732 61 aa7.74□□□□□ -1.17
TMEM259-201ENST00000333175 MT1LQ93083 61 aa7.71□□□□□ -1.18
TMEM259-201ENST00000333175 LCE2DQ5TA82 110 aaPredicted RBP7.67□□□□□ -1.18
TMEM259-201ENST00000333175 FCGBPQ9Y6R7 5405 aaPredicted RBP7.65□□□□□ -1.19
TMEM259-201ENST00000333175 MUC12Q9UKN1 5478 aa7.58□□□□□ -1.2
TMEM259-201ENST00000333175 KRTAP9-2Q9BYQ4 174 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms