RNA–Protein interactions for RNA: ENST00000333137.11

SMTN-201, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMTN, Length 3,295 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-201ENST00000333137 PLAC4Q8WY50 150 aa7.03□□□□□ -1.28
SMTN-201ENST00000333137 DNAH8Q96JB1 4490 aa7.03□□□□□ -1.28
SMTN-201ENST00000333137 LRP1BQ9NZR2 4599 aa7.02□□□□□ -1.28
SMTN-201ENST00000333137 J3QL48 77 aa7.02□□□□□ -1.29
SMTN-201ENST00000333137 DYNC1H1Q14204 4646 aaKnown RBP7.01□□□□□ -1.29
SMTN-201ENST00000333137 KIAA1109Q2LD37 5005 aa7.01□□□□□ -1.29
SMTN-201ENST00000333137 HECTD4Q9Y4D8 3996 aa6.99□□□□□ -1.29
SMTN-201ENST00000333137 EPPK1P58107 5090 aaKnown RBP6.99□□□□□ -1.29
SMTN-201ENST00000333137 C9orf92A6NGG3 77 aa6.98□□□□□ -1.29
SMTN-201ENST00000333137 KRTAP12-2P59991 146 aa6.96□□□□□ -1.3
SMTN-201ENST00000333137 A0A1B0GVY2 172 aa6.95□□□□□ -1.3
SMTN-201ENST00000333137 KRTAP13-2Q52LG2 175 aa6.94□□□□□ -1.3
SMTN-201ENST00000333137 PKD1P98161 4303 aa6.93□□□□□ -1.3
SMTN-201ENST00000333137 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
SMTN-201ENST00000333137 XP32Q5T750 250 aa6.88□□□□□ -1.31
SMTN-201ENST00000333137 CAMK2N1Q7Z7J9 78 aa6.88□□□□□ -1.31
SMTN-201ENST00000333137 APOBP04114 4563 aaKnown RBP6.86□□□□□ -1.31
SMTN-201ENST00000333137 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
SMTN-201ENST00000333137 Q5VSD8 79 aa6.83□□□□□ -1.32
SMTN-201ENST00000333137 VPS13BQ7Z7G8 4022 aa6.82□□□□□ -1.32
SMTN-201ENST00000333137 KRTAP17-1Q9BYP8 105 aa6.79□□□□□ -1.32
SMTN-201ENST00000333137 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
SMTN-201ENST00000333137 KRTAP10-8P60410 259 aa6.76□□□□□ -1.33
SMTN-201ENST00000333137 RYR1P21817 5038 aa6.76□□□□□ -1.33
SMTN-201ENST00000333137 LRP1Q07954 4544 aaKnown RBP6.75□□□□□ -1.33
SMTN-201ENST00000333137 MYCBP2O75592 4640 aa6.74□□□□□ -1.33
SMTN-201ENST00000333137 KRTAP4-5Q9BYR2 181 aa6.74□□□□□ -1.33
SMTN-201ENST00000333137 HSPG2P98160 4391 aa6.71□□□□□ -1.34
SMTN-201ENST00000333137 KRTAP1-4P0C5Y4 121 aa6.7□□□□□ -1.34
SMTN-201ENST00000333137 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
SMTN-201ENST00000333137 KRTAP10-4P60372 401 aaPredicted RBP6.61□□□□□ -1.35
SMTN-201ENST00000333137 PRO2289Q9P1D8 64 aa6.6□□□□□ -1.35
SMTN-201ENST00000333137 FAT3Q8TDW7 4589 aa6.58□□□□□ -1.36
SMTN-201ENST00000333137 ABCA13Q86UQ4 5058 aa6.58□□□□□ -1.36
SMTN-201ENST00000333137 HERC2O95714 4834 aa6.57□□□□□ -1.36
SMTN-201ENST00000333137 BIRC6Q9NR09 4857 aa6.56□□□□□ -1.36
SMTN-201ENST00000333137 R4GN34 69 aa6.52□□□□□ -1.36
SMTN-201ENST00000333137 RPS29P62273 56 aaKnown RBP6.47□□□□□ -1.37
SMTN-201ENST00000333137 PCLOQ9Y6V0 5065 aa6.44□□□□□ -1.38
SMTN-201ENST00000333137 M0QZ58 72 aa6.44□□□□□ -1.38
SMTN-201ENST00000333137 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
SMTN-201ENST00000333137 MT1HL1P0DM35 61 aa6.38□□□□□ -1.39
SMTN-201ENST00000333137 HERC1Q15751 4861 aa6.38□□□□□ -1.39
SMTN-201ENST00000333137 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
SMTN-201ENST00000333137 LPAP08519 4548 aa6.29□□□□□ -1.4
SMTN-201ENST00000333137 TNXBP22105 4242 aa6.28□□□□□ -1.4
SMTN-201ENST00000333137 LRP2P98164 4655 aa6.28□□□□□ -1.4
SMTN-201ENST00000333137 INE1O15225 51 aa6.22□□□□□ -1.41
SMTN-201ENST00000333137 MUC2Q02817 5179 aa6.14□□□□□ -1.43
SMTN-201ENST00000333137 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
SMTN-201ENST00000333137 UBR4Q5T4S7 5183 aa6.09□□□□□ -1.44
SMTN-201ENST00000333137 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
SMTN-201ENST00000333137 HMCN2Q8NDA2 5059 aa5.99□□□□□ -1.45
SMTN-201ENST00000333137 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
SMTN-201ENST00000333137 TNP1P09430 55 aa5.92□□□□□ -1.46
SMTN-201ENST00000333137 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.46
SMTN-201ENST00000333137 KRTAP4-1Q9BYQ7 146 aa5.88□□□□□ -1.47
SMTN-201ENST00000333137 M0R2T5 61 aa5.71□□□□□ -1.5
SMTN-201ENST00000333137 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
SMTN-201ENST00000333137 MUC17Q685J3 4493 aa5.61□□□□□ -1.51
SMTN-201ENST00000333137 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
SMTN-201ENST00000333137 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
SMTN-201ENST00000333137 KRTAP19-2Q3LHN2 52 aa5.45□□□□□ -1.54
SMTN-201ENST00000333137 LCE2CQ5TA81 110 aa5.44□□□□□ -1.54
SMTN-201ENST00000333137 MT1HP80294 61 aa5.41□□□□□ -1.54
SMTN-201ENST00000333137 FLGP20930 4061 aaPredicted RBP5.35□□□□□ -1.55
SMTN-201ENST00000333137 KRTAP10-10P60014 251 aa5.34□□□□□ -1.55
SMTN-201ENST00000333137 USH2AO75445 5202 aa5.26□□□□□ -1.57
SMTN-201ENST00000333137 MT1FP04733 61 aa5.21□□□□□ -1.58
SMTN-201ENST00000333137 MT2AP02795 61 aa5.19□□□□□ -1.58
SMTN-201ENST00000333137 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
SMTN-201ENST00000333137 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
SMTN-201ENST00000333137 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
SMTN-201ENST00000333137 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
SMTN-201ENST00000333137 LCE2AQ5TA79 106 aaPredicted RBP5.13□□□□□ -1.59
SMTN-201ENST00000333137 KRTAP19-1Q8IUB9 90 aa5□□□□□ -1.61
SMTN-201ENST00000333137 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
SMTN-201ENST00000333137 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
SMTN-201ENST00000333137 LCE2BO14633 110 aa4.94□□□□□ -1.62
SMTN-201ENST00000333137 KRTAP10-5P60370 271 aa4.85□□□□□ -1.63
SMTN-201ENST00000333137 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
SMTN-201ENST00000333137 MT1BP07438 61 aa4.82□□□□□ -1.64
SMTN-201ENST00000333137 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
SMTN-201ENST00000333137 KMT2DO14686 5537 aa4.8□□□□□ -1.64
SMTN-201ENST00000333137 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
SMTN-201ENST00000333137 KRTAP9-2Q9BYQ4 174 aa4.75□□□□□ -1.65
SMTN-201ENST00000333137 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
SMTN-201ENST00000333137 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
SMTN-201ENST00000333137 KRTAP2-1Q9BYU5 128 aa4.75□□□□□ -1.65
SMTN-201ENST00000333137 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
SMTN-201ENST00000333137 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
SMTN-201ENST00000333137 MT1XP80297 61 aa4.68□□□□□ -1.66
SMTN-201ENST00000333137 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
SMTN-201ENST00000333137 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
SMTN-201ENST00000333137 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
SMTN-201ENST00000333137 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
SMTN-201ENST00000333137 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.67
SMTN-201ENST00000333137 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
SMTN-201ENST00000333137 KRTAP4-8A0A0G2JLE6 195 aa4.56□□□□□ -1.68
SMTN-201ENST00000333137 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms