RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 KIAA1109Q2LD37 5005 aa2.17□□□□□ -2.06
RLIM-201ENST00000332687 FBN1P35555 2871 aaKnown RBP2.17□□□□□ -2.06
RLIM-201ENST00000332687 DNAH1Q9P2D7 4330 aa2.16□□□□□ -2.06
RLIM-201ENST00000332687 RYR3Q15413 4870 aa2.16□□□□□ -2.06
RLIM-201ENST00000332687 HYDINQ4G0P3 5121 aa2.16□□□□□ -2.06
RLIM-201ENST00000332687 OTOGQ6ZRI0 2925 aa2.15□□□□□ -2.07
RLIM-201ENST00000332687 TRRAPQ9Y4A5 3859 aa2.14□□□□□ -2.07
RLIM-201ENST00000332687 PLECQ15149 4684 aaKnown RBP2.13□□□□□ -2.07
RLIM-201ENST00000332687 EPPK1P58107 5090 aaKnown RBP2.13□□□□□ -2.07
RLIM-201ENST00000332687 SRRM2Q9UQ35 2752 aaKnown RBP2.12□□□□□ -2.07
RLIM-201ENST00000332687 ABCA13Q86UQ4 5058 aa2.12□□□□□ -2.07
RLIM-201ENST00000332687 HERC2O95714 4834 aa2.1□□□□□ -2.07
RLIM-201ENST00000332687 DYNC1H1Q14204 4646 aaKnown RBP2.1□□□□□ -2.07
RLIM-201ENST00000332687 ANK2Q01484 3957 aa2.09□□□□□ -2.07
RLIM-201ENST00000332687 KRTAP3-3Q9BYR6 98 aa2.09□□□□□ -2.08
RLIM-201ENST00000332687 KRTAP3-2Q9BYR7 98 aa2.08□□□□□ -2.08
RLIM-201ENST00000332687 PCLOQ9Y6V0 5065 aa2.08□□□□□ -2.08
RLIM-201ENST00000332687 LYSTQ99698 3801 aa2.07□□□□□ -2.08
RLIM-201ENST00000332687 KRTAP10-7P60409 375 aaPredicted RBP2.07□□□□□ -2.08
RLIM-201ENST00000332687 KRTAP4-5Q9BYR2 181 aa2.06□□□□□ -2.08
RLIM-201ENST00000332687 SPRR2GQ9BYE4 73 aa2.05□□□□□ -2.08
RLIM-201ENST00000332687 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
RLIM-201ENST00000332687 LCE3AQ5TA76 89 aa2.03□□□□□ -2.09
RLIM-201ENST00000332687 MT1HP80294 61 aa2.01□□□□□ -2.09
RLIM-201ENST00000332687 HERC1Q15751 4861 aa2.01□□□□□ -2.09
RLIM-201ENST00000332687 LORP23490 312 aaPredicted RBP1.99□□□□□ -2.09
RLIM-201ENST00000332687 DNAH11Q96DT5 4516 aa1.98□□□□□ -2.09
RLIM-201ENST00000332687 HMCN2Q8NDA2 5059 aa1.97□□□□□ -2.09
RLIM-201ENST00000332687 KMT2CQ8NEZ4 4911 aaKnown RBP1.97□□□□□ -2.09
RLIM-201ENST00000332687 DNAH6Q9C0G6 4158 aa1.97□□□□□ -2.09
RLIM-201ENST00000332687 FRAS1Q86XX4 4008 aa1.97□□□□□ -2.09
RLIM-201ENST00000332687 SPRR2FQ96RM1 72 aa1.97□□□□□ -2.09
RLIM-201ENST00000332687 DNAH5Q8TE73 4624 aa1.97□□□□□ -2.09
RLIM-201ENST00000332687 SACSQ9NZJ4 4579 aa1.97□□□□□ -2.09
RLIM-201ENST00000332687 OBSCNQ5VST9 7968 aa1.96□□□□□ -2.1
RLIM-201ENST00000332687 KRTAP10-5P60370 271 aa1.96□□□□□ -2.1
RLIM-201ENST00000332687 MT2AP02795 61 aa1.96□□□□□ -2.1
RLIM-201ENST00000332687 DNAH9Q9NYC9 4486 aa1.96□□□□□ -2.1
RLIM-201ENST00000332687 LRP1BQ9NZR2 4599 aa1.95□□□□□ -2.1
RLIM-201ENST00000332687 FAT1Q14517 4588 aa1.93□□□□□ -2.1
RLIM-201ENST00000332687 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
RLIM-201ENST00000332687 UBR4Q5T4S7 5183 aa1.92□□□□□ -2.1
RLIM-201ENST00000332687 DNAH2Q9P225 4427 aa1.91□□□□□ -2.1
RLIM-201ENST00000332687 KRTAP17-1Q9BYP8 105 aa1.91□□□□□ -2.1
RLIM-201ENST00000332687 DNAH10Q8IVF4 4471 aa1.91□□□□□ -2.1
RLIM-201ENST00000332687 DNAH3Q8TD57 4116 aa1.91□□□□□ -2.1
RLIM-201ENST00000332687 SPRR2EP22531 72 aa1.91□□□□□ -2.1
RLIM-201ENST00000332687 SPRR2BP35325 72 aa1.91□□□□□ -2.1
RLIM-201ENST00000332687 SPRR2AP35326 72 aa1.91□□□□□ -2.1
RLIM-201ENST00000332687 KRTAP19-8Q3LI54 63 aa1.9□□□□□ -2.11
RLIM-201ENST00000332687 DNAH7Q8WXX0 4024 aa1.89□□□□□ -2.11
RLIM-201ENST00000332687 LCE2BO14633 110 aa1.89□□□□□ -2.11
RLIM-201ENST00000332687 LCE3CQ5T5A8 94 aa1.88□□□□□ -2.11
RLIM-201ENST00000332687 DNAH17Q9UFH2 4485 aa1.88□□□□□ -2.11
RLIM-201ENST00000332687 RNF213Q63HN8 5207 aa1.87□□□□□ -2.11
RLIM-201ENST00000332687 SPRR2DP22532 72 aa1.87□□□□□ -2.11
RLIM-201ENST00000332687 STARD9Q9P2P6 4700 aa1.87□□□□□ -2.11
RLIM-201ENST00000332687 MT1FP04733 61 aa1.86□□□□□ -2.11
RLIM-201ENST00000332687 HECTD4Q9Y4D8 3996 aa1.86□□□□□ -2.11
RLIM-201ENST00000332687 VPS13DQ5THJ4 4388 aa1.85□□□□□ -2.11
RLIM-201ENST00000332687 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
RLIM-201ENST00000332687 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.11
RLIM-201ENST00000332687 APOBP04114 4563 aaKnown RBP1.84□□□□□ -2.12
RLIM-201ENST00000332687 FAT2Q9NYQ8 4349 aa1.83□□□□□ -2.12
RLIM-201ENST00000332687 MT1GP13640 62 aa1.83□□□□□ -2.12
RLIM-201ENST00000332687 CMYA5Q8N3K9 4069 aa1.83□□□□□ -2.12
RLIM-201ENST00000332687 VPS13BQ7Z7G8 4022 aa1.82□□□□□ -2.12
RLIM-201ENST00000332687 DYNC2H1Q8NCM8 4307 aaKnown RBP1.81□□□□□ -2.12
RLIM-201ENST00000332687 MYCBP2O75592 4640 aa1.81□□□□□ -2.12
RLIM-201ENST00000332687 LCE2CQ5TA81 110 aa1.81□□□□□ -2.12
RLIM-201ENST00000332687 LRP1Q07954 4544 aaKnown RBP1.8□□□□□ -2.12
RLIM-201ENST00000332687 FAT4Q6V0I7 4981 aa1.78□□□□□ -2.12
RLIM-201ENST00000332687 DNAH8Q96JB1 4490 aa1.77□□□□□ -2.13
RLIM-201ENST00000332687 FAT3Q8TDW7 4589 aa1.77□□□□□ -2.13
RLIM-201ENST00000332687 PKHD1L1Q86WI1 4243 aa1.76□□□□□ -2.13
RLIM-201ENST00000332687 LCE2DQ5TA82 110 aaPredicted RBP1.74□□□□□ -2.13
RLIM-201ENST00000332687 KRTAP19-1Q8IUB9 90 aa1.74□□□□□ -2.13
RLIM-201ENST00000332687 PRKDCP78527 4128 aaKnown RBP1.73□□□□□ -2.13
RLIM-201ENST00000332687 KRTAP9-8Q9BYQ0 159 aa1.71□□□□□ -2.14
RLIM-201ENST00000332687 MT1XP80297 61 aa1.71□□□□□ -2.14
RLIM-201ENST00000332687 MT1LQ93083 61 aa1.71□□□□□ -2.14
RLIM-201ENST00000332687 KRTAP19-3Q7Z4W3 81 aa1.71□□□□□ -2.14
RLIM-201ENST00000332687 KRTAP9-3Q9BYQ3 159 aa1.7□□□□□ -2.14
RLIM-201ENST00000332687 HSPG2P98160 4391 aa1.69□□□□□ -2.14
RLIM-201ENST00000332687 KRTAP19-6Q3LI70 58 aa1.69□□□□□ -2.14
RLIM-201ENST00000332687 MT1BP07438 61 aa1.68□□□□□ -2.14
RLIM-201ENST00000332687 KMT2AQ03164 3969 aa1.68□□□□□ -2.14
RLIM-201ENST00000332687 LCE3DQ9BYE3 92 aa1.68□□□□□ -2.14
RLIM-201ENST00000332687 MT3P25713 68 aa1.67□□□□□ -2.14
RLIM-201ENST00000332687 KRTAP9-2Q9BYQ4 174 aa1.66□□□□□ -2.14
RLIM-201ENST00000332687 LCE3EQ5T5B0 92 aa1.66□□□□□ -2.14
RLIM-201ENST00000332687 KRTAP9-6A0A140TA67 174 aa1.66□□□□□ -2.14
RLIM-201ENST00000332687 LCE3BQ5TA77 95 aa1.66□□□□□ -2.14
RLIM-201ENST00000332687 DSTQ03001 7570 aaKnown RBP1.66□□□□□ -2.14
RLIM-201ENST00000332687 USH2AO75445 5202 aa1.65□□□□□ -2.15
RLIM-201ENST00000332687 LRP2P98164 4655 aa1.64□□□□□ -2.15
RLIM-201ENST00000332687 LCE1AQ5T7P2 110 aa1.64□□□□□ -2.15
RLIM-201ENST00000332687 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
RLIM-201ENST00000332687 MT1EP04732 61 aa1.63□□□□□ -2.15
RLIM-201ENST00000332687 PKD1P98161 4303 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms