RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 DCAF8L2P0C7V8 631 aa8.43□□□□□ -1.06
RLIM-201ENST00000332687 NISCHQ9Y2I1 1504 aa8.3□□□□□ -1.08
RLIM-201ENST00000332687 FAM9AQ8IZU1 332 aaPredicted RBP8.28□□□□□ -1.08
RLIM-201ENST00000332687 APLP2Q06481 763 aa7.88□□□□□ -1.15
RLIM-201ENST00000332687 PELP1Q8IZL8 1130 aaKnown RBP7.84□□□□□ -1.15
RLIM-201ENST00000332687 SUPT5HO00267 1087 aaKnown RBP7.7□□□□□ -1.18
RLIM-201ENST00000332687 SHROOM4Q9ULL8 1493 aa7.52□□□□□ -1.21
RLIM-201ENST00000332687 CCER1Q8TC90 406 aaPredicted RBP7.49□□□□□ -1.21
RLIM-201ENST00000332687 ZEB1P37275 1124 aaPredicted RBP7.42□□□□□ -1.22
RLIM-201ENST00000332687 TRIM41Q8WV44 630 aa7.39□□□□□ -1.23
RLIM-201ENST00000332687 ATP1B4Q9UN42 357 aaPredicted RBP7.38□□□□□ -1.23
RLIM-201ENST00000332687 MYT1LQ9UL68 1186 aa7.35□□□□□ -1.23
RLIM-201ENST00000332687 UBTFP17480 764 aaKnown RBP7.35□□□□□ -1.23
RLIM-201ENST00000332687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.26□□□□□ -1.25
RLIM-201ENST00000332687 HNRNPUL2Q1KMD3 747 aaKnown RBP7.26□□□□□ -1.25
RLIM-201ENST00000332687 CENPBP07199 599 aaPredicted RBP7.25□□□□□ -1.25
RLIM-201ENST00000332687 NEFLP07196 543 aa7.24□□□□□ -1.25
RLIM-201ENST00000332687 ERICH6Q7L0X2 663 aa7.22□□□□□ -1.25
RLIM-201ENST00000332687 EHMT2Q96KQ7 1210 aa7.22□□□□□ -1.25
RLIM-201ENST00000332687 CCDC180Q9P1Z9 1646 aa7.19□□□□□ -1.26
RLIM-201ENST00000332687 ABCC9O60706 1549 aa7.15□□□□□ -1.26
RLIM-201ENST00000332687 RANGAP1P46060 587 aaPredicted RBP7.14□□□□□ -1.27
RLIM-201ENST00000332687 YTHDC1Q96MU7 727 aaKnown RBP7.14□□□□□ -1.27
RLIM-201ENST00000332687 NEFMP07197 916 aa7.12□□□□□ -1.27
RLIM-201ENST00000332687 CDK11AQ9UQ88 783 aaPredicted RBP7.11□□□□□ -1.27
RLIM-201ENST00000332687 ESF1Q9H501 851 aaKnown RBP7.11□□□□□ -1.27
RLIM-201ENST00000332687 DAXXQ9UER7 740 aaPredicted RBP7.11□□□□□ -1.27
RLIM-201ENST00000332687 NPM1P06748 294 aaKnown RBP eCLIP7.1□□□□□ -1.27
RLIM-201ENST00000332687 ACIN1Q9UKV3 1341 aaKnown RBP7.1□□□□□ -1.27
RLIM-201ENST00000332687 PCGF6Q9BYE7 350 aa7.08□□□□□ -1.28
RLIM-201ENST00000332687 RB1CC1Q8TDY2 1594 aa7.06□□□□□ -1.28
RLIM-201ENST00000332687 ZBTB47Q9UFB7 747 aaPredicted RBP7.03□□□□□ -1.28
RLIM-201ENST00000332687 SLC4A1APQ9BWU0 796 aaKnown RBP7.01□□□□□ -1.29
RLIM-201ENST00000332687 TTBK1Q5TCY1 1321 aaPredicted RBP7.01□□□□□ -1.29
RLIM-201ENST00000332687 MYT1Q01538 1121 aa6.98□□□□□ -1.29
RLIM-201ENST00000332687 FBLN2P98095 1184 aa6.97□□□□□ -1.29
RLIM-201ENST00000332687 TRIM26Q12899 539 aaPredicted RBP6.97□□□□□ -1.29
RLIM-201ENST00000332687 NACADO15069 1562 aa6.97□□□□□ -1.29
RLIM-201ENST00000332687 BCANQ96GW7 911 aa6.95□□□□□ -1.3
RLIM-201ENST00000332687 PABPN1Q86U42 306 aaKnown RBP eCLIP6.95□□□□□ -1.3
RLIM-201ENST00000332687 POLR3GLQ9BT43 218 aa6.92□□□□□ -1.3
RLIM-201ENST00000332687 TRIM52Q96A61 297 aa6.91□□□□□ -1.3
RLIM-201ENST00000332687 STAG3Q9UJ98 1225 aa6.91□□□□□ -1.3
RLIM-201ENST00000332687 CHIC1Q5VXU3 224 aa6.91□□□□□ -1.3
RLIM-201ENST00000332687 FAM50AQ14320 339 aaKnown RBP6.9□□□□□ -1.3
RLIM-201ENST00000332687 ITGAEP38570 1179 aa6.89□□□□□ -1.31
RLIM-201ENST00000332687 SCRIBQ14160 1630 aa6.88□□□□□ -1.31
RLIM-201ENST00000332687 CLSPNQ9HAW4 1339 aa6.87□□□□□ -1.31
RLIM-201ENST00000332687 ZNF316A6NFI3 1004 aaPredicted RBP6.86□□□□□ -1.31
RLIM-201ENST00000332687 SLC24A1O60721 1099 aa6.84□□□□□ -1.32
RLIM-201ENST00000332687 NPM2Q86SE8 214 aaKnown RBP6.82□□□□□ -1.32
RLIM-201ENST00000332687 CHMP7Q8WUX9 453 aaPredicted RBP6.82□□□□□ -1.32
RLIM-201ENST00000332687 EIF5BO60841 1220 aaKnown RBP6.81□□□□□ -1.32
RLIM-201ENST00000332687 ERCC6Q03468 1493 aa6.81□□□□□ -1.32
RLIM-201ENST00000332687 RSF1Q96T23 1441 aaPredicted RBP6.8□□□□□ -1.32
RLIM-201ENST00000332687 TSPY4P0CV99 314 aa6.8□□□□□ -1.32
RLIM-201ENST00000332687 TSPY10P0CW01 314 aa6.8□□□□□ -1.32
RLIM-201ENST00000332687 HDGFP51858 240 aaKnown RBP6.79□□□□□ -1.32
RLIM-201ENST00000332687 ZCCHC6Q5VYS8 1495 aaKnown RBP6.79□□□□□ -1.32
RLIM-201ENST00000332687 EEA1Q15075 1411 aa6.79□□□□□ -1.32
RLIM-201ENST00000332687 ANP32CO43423 234 aa6.78□□□□□ -1.32
RLIM-201ENST00000332687 CANXP27824 592 aaKnown RBP6.78□□□□□ -1.32
RLIM-201ENST00000332687 CSRNP3Q8WYN3 585 aa6.76□□□□□ -1.33
RLIM-201ENST00000332687 RTL5Q5HYW3 569 aaPredicted RBP6.75□□□□□ -1.33
RLIM-201ENST00000332687 BAZ1BQ9UIG0 1483 aaKnown RBP6.73□□□□□ -1.33
RLIM-201ENST00000332687 CDCA8Q53HL2 280 aa6.73□□□□□ -1.33
RLIM-201ENST00000332687 ZNF777Q9ULD5 760 aaPredicted RBP6.72□□□□□ -1.33
RLIM-201ENST00000332687 PLEKHD1A6NEE1 506 aa6.71□□□□□ -1.33
RLIM-201ENST00000332687 DCAF1Q9Y4B6 1507 aa6.71□□□□□ -1.34
RLIM-201ENST00000332687 EIF4G2P78344 907 aaKnown RBP eCLIP6.71□□□□□ -1.34
RLIM-201ENST00000332687 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.71□□□□□ -1.34
RLIM-201ENST00000332687 PPP1R15AO75807 674 aaPredicted RBP6.71□□□□□ -1.34
RLIM-201ENST00000332687 MTUS2Q5JR59 1369 aa6.7□□□□□ -1.34
RLIM-201ENST00000332687 CHGAP10645 457 aaKnown RBP6.7□□□□□ -1.34
RLIM-201ENST00000332687 ZNF326Q5BKZ1 582 aaKnown RBP6.69□□□□□ -1.34
RLIM-201ENST00000332687 BAZ1AQ9NRL2 1556 aaPredicted RBP6.69□□□□□ -1.34
RLIM-201ENST00000332687 TONSLQ96HA7 1378 aa6.69□□□□□ -1.34
RLIM-201ENST00000332687 SMARCA2P51531 1590 aa6.69□□□□□ -1.34
RLIM-201ENST00000332687 UPF2Q9HAU5 1272 aaKnown RBP6.69□□□□□ -1.34
RLIM-201ENST00000332687 HAP1P54257 671 aaPredicted RBP6.68□□□□□ -1.34
RLIM-201ENST00000332687 CLIP1P30622 1438 aa6.68□□□□□ -1.34
RLIM-201ENST00000332687 C14orf37Q86TY3 774 aa6.68□□□□□ -1.34
RLIM-201ENST00000332687 PDS5BQ9NTI5 1447 aa6.67□□□□□ -1.34
RLIM-201ENST00000332687 KANK1Q14678 1352 aa6.67□□□□□ -1.34
RLIM-201ENST00000332687 CDK11BP21127 795 aaKnown RBP6.67□□□□□ -1.34
RLIM-201ENST00000332687 ANP32BQ92688 251 aaKnown RBP6.67□□□□□ -1.34
RLIM-201ENST00000332687 KIF27Q86VH2 1401 aa6.67□□□□□ -1.34
RLIM-201ENST00000332687 CHMP4AQ9BY43 222 aa6.67□□□□□ -1.34
RLIM-201ENST00000332687 ARID4BQ4LE39 1312 aaPredicted RBP6.66□□□□□ -1.34
RLIM-201ENST00000332687 PNNQ9H307 717 aaKnown RBP6.66□□□□□ -1.34
RLIM-201ENST00000332687 NEUROD1Q13562 356 aa6.66□□□□□ -1.34
RLIM-201ENST00000332687 CHMP4BQ9H444 224 aaKnown RBP6.66□□□□□ -1.34
RLIM-201ENST00000332687 MYH16Q9H6N6 1097 aa6.66□□□□□ -1.34
RLIM-201ENST00000332687 CARMIL2Q6F5E8 1435 aa6.65□□□□□ -1.35
RLIM-201ENST00000332687 ANO8Q9HCE9 1232 aaPredicted RBP6.64□□□□□ -1.35
RLIM-201ENST00000332687 CEP162Q5TB80 1403 aa6.64□□□□□ -1.35
RLIM-201ENST00000332687 FHAD1B1AJZ9 1412 aa6.63□□□□□ -1.35
RLIM-201ENST00000332687 CFAP53Q96M91 514 aa6.63□□□□□ -1.35
RLIM-201ENST00000332687 MYO15BQ96JP2 1530 aa6.62□□□□□ -1.35
RLIM-201ENST00000332687 ABCC8Q09428 1581 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms