RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 LRP1Q07954 4544 aaKnown RBP9.31□□□□□ -0.92
PRKCD-201ENST00000330452 Q8N1X5 172 aa9.27□□□□□ -0.93
PRKCD-201ENST00000330452 KIAA1109Q2LD37 5005 aa9.24□□□□□ -0.93
PRKCD-201ENST00000330452 C10orf95Q9H7T3 257 aa9.24□□□□□ -0.93
PRKCD-201ENST00000330452 DMBT1Q9UGM3 2413 aaPredicted RBP9.21□□□□□ -0.93
PRKCD-201ENST00000330452 EPPK1P58107 5090 aaKnown RBP9.18□□□□□ -0.94
PRKCD-201ENST00000330452 MYCBP2O75592 4640 aa9.18□□□□□ -0.94
PRKCD-201ENST00000330452 HSPG2P98160 4391 aa9.17□□□□□ -0.94
PRKCD-201ENST00000330452 KRTAP10-4P60372 401 aaPredicted RBP9.17□□□□□ -0.94
PRKCD-201ENST00000330452 PKHD1L1Q86WI1 4243 aa9.16□□□□□ -0.94
PRKCD-201ENST00000330452 C9orf92A6NGG3 77 aa9.15□□□□□ -0.94
PRKCD-201ENST00000330452 KRTAP17-1Q9BYP8 105 aa9.15□□□□□ -0.94
PRKCD-201ENST00000330452 RPS29P62273 56 aaKnown RBP9.14□□□□□ -0.95
PRKCD-201ENST00000330452 COX6B2Q6YFQ2 88 aa9.11□□□□□ -0.95
PRKCD-201ENST00000330452 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
PRKCD-201ENST00000330452 RYR1P21817 5038 aa9.04□□□□□ -0.96
PRKCD-201ENST00000330452 Q5VSD8 79 aa9.01□□□□□ -0.97
PRKCD-201ENST00000330452 SEC61BP60468 96 aaKnown RBP9□□□□□ -0.97
PRKCD-201ENST00000330452 FAT3Q8TDW7 4589 aa8.96□□□□□ -0.97
PRKCD-201ENST00000330452 TNXBP22105 4242 aa8.96□□□□□ -0.97
PRKCD-201ENST00000330452 KRTAP3-1Q9BYR8 98 aa8.96□□□□□ -0.97
PRKCD-201ENST00000330452 A0A0D9SG42 100 aa8.87□□□□□ -0.99
PRKCD-201ENST00000330452 KRTAP13-4Q3LI77 160 aa8.84□□□□□ -0.99
PRKCD-201ENST00000330452 ABCA13Q86UQ4 5058 aa8.8□□□□□ -1
PRKCD-201ENST00000330452 KRTAP4-5Q9BYR2 181 aa8.79□□□□□ -1
PRKCD-201ENST00000330452 KRTAP10-8P60410 259 aa8.75□□□□□ -1.01
PRKCD-201ENST00000330452 KRTAP10-6P60371 365 aaPredicted RBP8.74□□□□□ -1.01
PRKCD-201ENST00000330452 LPAP08519 4548 aa8.72□□□□□ -1.01
PRKCD-201ENST00000330452 S4R3F8 94 aa8.71□□□□□ -1.01
PRKCD-201ENST00000330452 KRTAP3-2Q9BYR7 98 aa8.69□□□□□ -1.02
PRKCD-201ENST00000330452 XP32Q5T750 250 aa8.68□□□□□ -1.02
PRKCD-201ENST00000330452 LRP2P98164 4655 aa8.67□□□□□ -1.02
PRKCD-201ENST00000330452 MT1HL1P0DM35 61 aa8.67□□□□□ -1.02
PRKCD-201ENST00000330452 KRTAP12-2P59991 146 aa8.64□□□□□ -1.03
PRKCD-201ENST00000330452 PLAC4Q8WY50 150 aa8.58□□□□□ -1.04
PRKCD-201ENST00000330452 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
PRKCD-201ENST00000330452 HERC2O95714 4834 aa8.56□□□□□ -1.04
PRKCD-201ENST00000330452 KRTAP12-1P59990 96 aa8.48□□□□□ -1.05
PRKCD-201ENST00000330452 MUC2Q02817 5179 aa8.4□□□□□ -1.07
PRKCD-201ENST00000330452 PCLOQ9Y6V0 5065 aa8.36□□□□□ -1.07
PRKCD-201ENST00000330452 HERC1Q15751 4861 aa8.36□□□□□ -1.07
PRKCD-201ENST00000330452 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
PRKCD-201ENST00000330452 BIRC6Q9NR09 4857 aa8.33□□□□□ -1.08
PRKCD-201ENST00000330452 J3QL48 77 aa8.31□□□□□ -1.08
PRKCD-201ENST00000330452 PRO2289Q9P1D8 64 aa8.13□□□□□ -1.11
PRKCD-201ENST00000330452 KRTAP4-1Q9BYQ7 146 aa8.1□□□□□ -1.11
PRKCD-201ENST00000330452 MUC17Q685J3 4493 aa8.05□□□□□ -1.12
PRKCD-201ENST00000330452 M0QZ58 72 aa8.04□□□□□ -1.12
PRKCD-201ENST00000330452 RNF213Q63HN8 5207 aa8.01□□□□□ -1.13
PRKCD-201ENST00000330452 FAT4Q6V0I7 4981 aa7.97□□□□□ -1.13
PRKCD-201ENST00000330452 HMCN2Q8NDA2 5059 aa7.97□□□□□ -1.13
PRKCD-201ENST00000330452 UBR4Q5T4S7 5183 aa7.94□□□□□ -1.14
PRKCD-201ENST00000330452 PP632Q6XCG6 107 aa7.87□□□□□ -1.15
PRKCD-201ENST00000330452 R4GN34 69 aa7.86□□□□□ -1.15
PRKCD-201ENST00000330452 LORP23490 312 aaPredicted RBP7.85□□□□□ -1.15
PRKCD-201ENST00000330452 SPRR5A0A1B0GTR4 108 aa7.82□□□□□ -1.16
PRKCD-201ENST00000330452 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
PRKCD-201ENST00000330452 INE1O15225 51 aa7.72□□□□□ -1.17
PRKCD-201ENST00000330452 FLGP20930 4061 aaPredicted RBP7.62□□□□□ -1.19
PRKCD-201ENST00000330452 LCE2CQ5TA81 110 aa7.46□□□□□ -1.21
PRKCD-201ENST00000330452 M0R2T5 61 aa7.4□□□□□ -1.22
PRKCD-201ENST00000330452 KRTAP23-1A1A580 65 aa7.31□□□□□ -1.24
PRKCD-201ENST00000330452 MT1HP80294 61 aa7.3□□□□□ -1.24
PRKCD-201ENST00000330452 TNP1P09430 55 aa7.23□□□□□ -1.25
PRKCD-201ENST00000330452 MT1FP04733 61 aa7.13□□□□□ -1.27
PRKCD-201ENST00000330452 KRTAP10-10P60014 251 aa7.12□□□□□ -1.27
PRKCD-201ENST00000330452 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
PRKCD-201ENST00000330452 SPRR2GQ9BYE4 73 aa7.1□□□□□ -1.27
PRKCD-201ENST00000330452 MT2AP02795 61 aa7.09□□□□□ -1.27
PRKCD-201ENST00000330452 KRTAP9-8Q9BYQ0 159 aa7.05□□□□□ -1.28
PRKCD-201ENST00000330452 USH2AO75445 5202 aa7.04□□□□□ -1.28
PRKCD-201ENST00000330452 FSIP2Q5CZC0 6907 aa6.87□□□□□ -1.31
PRKCD-201ENST00000330452 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
PRKCD-201ENST00000330452 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
PRKCD-201ENST00000330452 KRTAP9-3Q9BYQ3 159 aa6.75□□□□□ -1.33
PRKCD-201ENST00000330452 MT1BP07438 61 aa6.74□□□□□ -1.33
PRKCD-201ENST00000330452 KRTAP10-5P60370 271 aa6.7□□□□□ -1.34
PRKCD-201ENST00000330452 MT1XP80297 61 aa6.69□□□□□ -1.34
PRKCD-201ENST00000330452 KMT2DO14686 5537 aa6.68□□□□□ -1.34
PRKCD-201ENST00000330452 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
PRKCD-201ENST00000330452 LCE2BO14633 110 aa6.65□□□□□ -1.35
PRKCD-201ENST00000330452 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
PRKCD-201ENST00000330452 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
PRKCD-201ENST00000330452 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
PRKCD-201ENST00000330452 KRTAP12-3P60328 96 aa6.48□□□□□ -1.37
PRKCD-201ENST00000330452 SSPOA2VEC9 5147 aa6.41□□□□□ -1.38
PRKCD-201ENST00000330452 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
PRKCD-201ENST00000330452 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
PRKCD-201ENST00000330452 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
PRKCD-201ENST00000330452 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
PRKCD-201ENST00000330452 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
PRKCD-201ENST00000330452 KRTAP2-1Q9BYU5 128 aa6.13□□□□□ -1.43
PRKCD-201ENST00000330452 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
PRKCD-201ENST00000330452 FCGBPQ9Y6R7 5405 aaPredicted RBP6.03□□□□□ -1.44
PRKCD-201ENST00000330452 KRTAP9-6A8MVA2 160 aa6.02□□□□□ -1.45
PRKCD-201ENST00000330452 MUC12Q9UKN1 5478 aa5.98□□□□□ -1.45
PRKCD-201ENST00000330452 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
PRKCD-201ENST00000330452 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
PRKCD-201ENST00000330452 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.46
PRKCD-201ENST00000330452 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms