RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 FAM236AA0A1B0GUQ0 79 aa12.73□□□□□ -0.37
ATPAF1-201ENST00000329231 FAM236BA0A1B0GV22 79 aa12.73□□□□□ -0.37
ATPAF1-201ENST00000329231 KRTAP19-6Q3LI70 58 aa12.72□□□□□ -0.37
ATPAF1-201ENST00000329231 H3BPC8 53 aa12.66□□□□□ -0.38
ATPAF1-201ENST00000329231 KLKP1Q107X0 134 aa12.66□□□□□ -0.38
ATPAF1-201ENST00000329231 KRTAP9-7A8MTY7 169 aa12.62□□□□□ -0.39
ATPAF1-201ENST00000329231 KRTAP3-3Q9BYR6 98 aa12.61□□□□□ -0.39
ATPAF1-201ENST00000329231 A8MUN3 132 aa12.57□□□□□ -0.4
ATPAF1-201ENST00000329231 SMIM20Q8N5G0 67 aa12.52□□□□□ -0.41
ATPAF1-201ENST00000329231 TRAV7A0A075B6U4 112 aa12.47□□□□□ -0.41
ATPAF1-201ENST00000329231 SPRR2GQ9BYE4 73 aa12.46□□□□□ -0.41
ATPAF1-201ENST00000329231 NDUFC1O43677 76 aa12.43□□□□□ -0.42
ATPAF1-201ENST00000329231 Q5VV11 94 aa12.38□□□□□ -0.43
ATPAF1-201ENST00000329231 KRTAP19-8Q3LI54 63 aa12.36□□□□□ -0.43
ATPAF1-201ENST00000329231 MT1BP07438 61 aa12.33□□□□□ -0.44
ATPAF1-201ENST00000329231 DMAC1Q96GE9 116 aa12.33□□□□□ -0.44
ATPAF1-201ENST00000329231 CRIPTQ9P021 101 aa12.33□□□□□ -0.44
ATPAF1-201ENST00000329231 MACF1Q9UPN3 7388 aaKnown RBP12.3□□□□□ -0.44
ATPAF1-201ENST00000329231 H0YAA0 97 aa12.28□□□□□ -0.44
ATPAF1-201ENST00000329231 A6NN06 94 aa12.2□□□□□ -0.46
ATPAF1-201ENST00000329231 SERP2Q8N6R1 65 aa12.19□□□□□ -0.46
ATPAF1-201ENST00000329231 SNURFQ9Y675 71 aa12.16□□□□□ -0.46
ATPAF1-201ENST00000329231 ADM2Q7Z4H4 148 aa12.14□□□□□ -0.47
ATPAF1-201ENST00000329231 ACYP2P14621 99 aa12.11□□□□□ -0.47
ATPAF1-201ENST00000329231 C20orf197Q8N268 126 aa12.09□□□□□ -0.47
ATPAF1-201ENST00000329231 SYNE2Q8WXH0 6885 aaKnown RBP12.08□□□□□ -0.48
ATPAF1-201ENST00000329231 KRTAP10-5P60370 271 aa12.05□□□□□ -0.48
ATPAF1-201ENST00000329231 KRTAP6-3Q3LI67 103 aa12.03□□□□□ -0.48
ATPAF1-201ENST00000329231 SPANXA2-OT1Q8N9U9 137 aa11.98□□□□□ -0.49
ATPAF1-201ENST00000329231 COX7CP15954 63 aa11.9□□□□□ -0.5
ATPAF1-201ENST00000329231 SPTSSBQ8NFR3 76 aa11.9□□□□□ -0.5
ATPAF1-201ENST00000329231 CHKB-CPT1BH3BT56 60 aa11.88□□□□□ -0.51
ATPAF1-201ENST00000329231 P0C880 135 aa11.86□□□□□ -0.51
ATPAF1-201ENST00000329231 R4GN34 69 aa11.85□□□□□ -0.51
ATPAF1-201ENST00000329231 KRTAP3-2Q9BYR7 98 aa11.83□□□□□ -0.52
ATPAF1-201ENST00000329231 PLAC4Q8WY50 150 aa11.75□□□□□ -0.53
ATPAF1-201ENST00000329231 M0QZ58 72 aa11.74□□□□□ -0.53
ATPAF1-201ENST00000329231 PRO2289Q9P1D8 64 aa11.69□□□□□ -0.54
ATPAF1-201ENST00000329231 ANAPC13Q9BS18 74 aa11.67□□□□□ -0.54
ATPAF1-201ENST00000329231 H7BZZ5 65 aa11.64□□□□□ -0.55
ATPAF1-201ENST00000329231 CYSTM1Q9H1C7 97 aa11.64□□□□□ -0.55
ATPAF1-201ENST00000329231 COA5Q86WW8 74 aa11.61□□□□□ -0.55
ATPAF1-201ENST00000329231 MT1XP80297 61 aa11.6□□□□□ -0.55
ATPAF1-201ENST00000329231 LINC01554Q52M75 96 aa11.57□□□□□ -0.56
ATPAF1-201ENST00000329231 KRTAP5-9P26371 169 aa11.51□□□□□ -0.57
ATPAF1-201ENST00000329231 MUC12Q9UKN1 5478 aa11.43□□□□□ -0.58
ATPAF1-201ENST00000329231 CCDC179H3BU77 68 aa11.41□□□□□ -0.58
ATPAF1-201ENST00000329231 NEBP20929 6669 aa11.37□□□□□ -0.59
ATPAF1-201ENST00000329231 KRTAP12-2P59991 146 aa11.32□□□□□ -0.6
ATPAF1-201ENST00000329231 SEC61GP60059 68 aa11.29□□□□□ -0.6
ATPAF1-201ENST00000329231 KMT2DO14686 5537 aa11.28□□□□□ -0.6
ATPAF1-201ENST00000329231 SERP1Q9Y6X1 66 aa11.26□□□□□ -0.61
ATPAF1-201ENST00000329231 KRTAP13-4Q3LI77 160 aa11.22□□□□□ -0.61
ATPAF1-201ENST00000329231 KRTAP8-1Q8IUC2 63 aa11.21□□□□□ -0.61
ATPAF1-201ENST00000329231 SPRR2FQ96RM1 72 aa11.21□□□□□ -0.61
ATPAF1-201ENST00000329231 ATP5EP56381 51 aaPredicted RBP11.2□□□□□ -0.62
ATPAF1-201ENST00000329231 MDN1Q9NU22 5596 aa11.12□□□□□ -0.63
ATPAF1-201ENST00000329231 KRTAP20-1Q3LI63 56 aa11.1□□□□□ -0.63
ATPAF1-201ENST00000329231 KRTAP10-7P60409 375 aaPredicted RBP11.07□□□□□ -0.64
ATPAF1-201ENST00000329231 A0A1B0GU33 70 aa11.06□□□□□ -0.64
ATPAF1-201ENST00000329231 KRTAP4-8A0A0G2JLE6 195 aa11.05□□□□□ -0.64
ATPAF1-201ENST00000329231 KRTAP4-8Q9BYQ9 185 aa11.05□□□□□ -0.64
ATPAF1-201ENST00000329231 A0A1B0GU69 56 aa11.02□□□□□ -0.65
ATPAF1-201ENST00000329231 SPRR2EP22531 72 aa11.02□□□□□ -0.65
ATPAF1-201ENST00000329231 SPRR2BP35325 72 aa11.02□□□□□ -0.65
ATPAF1-201ENST00000329231 SPRR2AP35326 72 aa11.02□□□□□ -0.65
ATPAF1-201ENST00000329231 KRTAP10-12P60413 245 aa11.02□□□□□ -0.65
ATPAF1-201ENST00000329231 TMEM258P61165 79 aa11.02□□□□□ -0.65
ATPAF1-201ENST00000329231 SPATA8Q6RVD6 105 aa10.97□□□□□ -0.65
ATPAF1-201ENST00000329231 A0A0D9SG42 100 aa10.92□□□□□ -0.66
ATPAF1-201ENST00000329231 CAMK2N1Q7Z7J9 78 aa10.92□□□□□ -0.66
ATPAF1-201ENST00000329231 LCE1AQ5T7P2 110 aa10.87□□□□□ -0.67
ATPAF1-201ENST00000329231 KRTAP2-3P0C7H8 128 aa10.84□□□□□ -0.67
ATPAF1-201ENST00000329231 KRTAP2-4Q9BYR9 128 aa10.84□□□□□ -0.67
ATPAF1-201ENST00000329231 PRR15LQ9BU68 103 aa10.81□□□□□ -0.68
ATPAF1-201ENST00000329231 LINC01558Q9Y6Z2 57 aa10.78□□□□□ -0.68
ATPAF1-201ENST00000329231 SPINT4Q6UDR6 99 aa10.76□□□□□ -0.69
ATPAF1-201ENST00000329231 SMIM26A0A096LP01 95 aa10.75□□□□□ -0.69
ATPAF1-201ENST00000329231 KRTAP12-1P59990 96 aa10.72□□□□□ -0.69
ATPAF1-201ENST00000329231 SPRR2DP22532 72 aa10.65□□□□□ -0.7
ATPAF1-201ENST00000329231 A8MU10 97 aa10.64□□□□□ -0.71
ATPAF1-201ENST00000329231 KRTAP2-2Q9BYT5 123 aa10.51□□□□□ -0.73
ATPAF1-201ENST00000329231 KRTAP2-1Q9BYU5 128 aa10.51□□□□□ -0.73
ATPAF1-201ENST00000329231 UQCR11O14957 56 aa10.45□□□□□ -0.74
ATPAF1-201ENST00000329231 V9GYY9 64 aa10.38□□□□□ -0.75
ATPAF1-201ENST00000329231 KRTAP19-7Q3SYF9 63 aa10.36□□□□□ -0.75
ATPAF1-201ENST00000329231 LCE3BQ5TA77 95 aa10.35□□□□□ -0.75
ATPAF1-201ENST00000329231 Q1T7F1 81 aa10.31□□□□□ -0.76
ATPAF1-201ENST00000329231 PCP4P48539 62 aa10.29□□□□□ -0.76
ATPAF1-201ENST00000329231 MT1EP04732 61 aa10.27□□□□□ -0.77
ATPAF1-201ENST00000329231 PSPHP1O15172 72 aa10.24□□□□□ -0.77
ATPAF1-201ENST00000329231 MIR22HGQ0VDD5 57 aa10.24□□□□□ -0.77
ATPAF1-201ENST00000329231 C10orf95Q9H7T3 257 aa10.22□□□□□ -0.77
ATPAF1-201ENST00000329231 LCE5AQ5TCM9 118 aa10.19□□□□□ -0.78
ATPAF1-201ENST00000329231 KRTAP19-3Q7Z4W3 81 aa10.18□□□□□ -0.78
ATPAF1-201ENST00000329231 KRTAP19-5Q3LI72 72 aa10.14□□□□□ -0.79
ATPAF1-201ENST00000329231 TNP1P09430 55 aa10.13□□□□□ -0.79
ATPAF1-201ENST00000329231 RPS28P62857 69 aaKnown RBP10.1□□□□□ -0.79
ATPAF1-201ENST00000329231 K7ERS5 55 aa10□□□□□ -0.81
ATPAF1-201ENST00000329231 MT1GP13640 62 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms