RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 MT1HL1P0DM35 61 aa5.74□□□□□ -1.49
PCM1-202ENST00000327578 FRAS1Q86XX4 4008 aa5.71□□□□□ -1.5
PCM1-202ENST00000327578 LORP23490 312 aaPredicted RBP5.71□□□□□ -1.5
PCM1-202ENST00000327578 ZNF469Q96JG9 3925 aaPredicted RBP5.69□□□□□ -1.5
PCM1-202ENST00000327578 KRTAP8-1Q8IUC2 63 aa5.65□□□□□ -1.5
PCM1-202ENST00000327578 DNAH2Q9P225 4427 aa5.63□□□□□ -1.51
PCM1-202ENST00000327578 CMYA5Q8N3K9 4069 aa5.61□□□□□ -1.51
PCM1-202ENST00000327578 DNAH3Q8TD57 4116 aa5.58□□□□□ -1.52
PCM1-202ENST00000327578 KRTAP4-5Q9BYR2 181 aa5.51□□□□□ -1.53
PCM1-202ENST00000327578 ANK2Q01484 3957 aa5.48□□□□□ -1.53
PCM1-202ENST00000327578 KRTAP10-4P60372 401 aaPredicted RBP5.44□□□□□ -1.54
PCM1-202ENST00000327578 LYSTQ99698 3801 aa5.41□□□□□ -1.54
PCM1-202ENST00000327578 DNAH7Q8WXX0 4024 aa5.41□□□□□ -1.54
PCM1-202ENST00000327578 VPS13BQ7Z7G8 4022 aa5.4□□□□□ -1.54
PCM1-202ENST00000327578 DNAH1Q9P2D7 4330 aa5.39□□□□□ -1.55
PCM1-202ENST00000327578 KMT2AQ03164 3969 aa5.37□□□□□ -1.55
PCM1-202ENST00000327578 DNAH6Q9C0G6 4158 aa5.33□□□□□ -1.56
PCM1-202ENST00000327578 DNAH8Q96JB1 4490 aa5.31□□□□□ -1.56
PCM1-202ENST00000327578 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
PCM1-202ENST00000327578 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
PCM1-202ENST00000327578 KRTAP19-5Q3LI72 72 aa5.29□□□□□ -1.56
PCM1-202ENST00000327578 DNAH10Q8IVF4 4471 aa5.28□□□□□ -1.56
PCM1-202ENST00000327578 HECTD4Q9Y4D8 3996 aa5.22□□□□□ -1.57
PCM1-202ENST00000327578 DNAH9Q9NYC9 4486 aa5.19□□□□□ -1.58
PCM1-202ENST00000327578 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
PCM1-202ENST00000327578 SPRR2GQ9BYE4 73 aa5.17□□□□□ -1.58
PCM1-202ENST00000327578 MT1HP80294 61 aa5.16□□□□□ -1.58
PCM1-202ENST00000327578 KRTAP4-1Q9BYQ7 146 aa5.14□□□□□ -1.59
PCM1-202ENST00000327578 FAT2Q9NYQ8 4349 aa5.11□□□□□ -1.59
PCM1-202ENST00000327578 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
PCM1-202ENST00000327578 DNAH11Q96DT5 4516 aa5.08□□□□□ -1.6
PCM1-202ENST00000327578 PRKDCP78527 4128 aaKnown RBP5.07□□□□□ -1.6
PCM1-202ENST00000327578 MT2AP02795 61 aa5.05□□□□□ -1.6
PCM1-202ENST00000327578 VPS13DQ5THJ4 4388 aa5.03□□□□□ -1.6
PCM1-202ENST00000327578 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
PCM1-202ENST00000327578 DYNC2H1Q8NCM8 4307 aaKnown RBP4.98□□□□□ -1.61
PCM1-202ENST00000327578 MT1FP04733 61 aa4.96□□□□□ -1.61
PCM1-202ENST00000327578 DNAH17Q9UFH2 4485 aa4.93□□□□□ -1.62
PCM1-202ENST00000327578 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.62
PCM1-202ENST00000327578 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
PCM1-202ENST00000327578 SPRR2EP22531 72 aa4.87□□□□□ -1.63
PCM1-202ENST00000327578 SPRR2BP35325 72 aa4.87□□□□□ -1.63
PCM1-202ENST00000327578 SPRR2AP35326 72 aa4.87□□□□□ -1.63
PCM1-202ENST00000327578 MT1GP13640 62 aa4.84□□□□□ -1.63
PCM1-202ENST00000327578 PLECQ15149 4684 aaKnown RBP4.8□□□□□ -1.64
PCM1-202ENST00000327578 STARD9Q9P2P6 4700 aa4.76□□□□□ -1.65
PCM1-202ENST00000327578 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
PCM1-202ENST00000327578 LCE2BO14633 110 aa4.7□□□□□ -1.66
PCM1-202ENST00000327578 SPRR2DP22532 72 aa4.69□□□□□ -1.66
PCM1-202ENST00000327578 PKD1P98161 4303 aa4.68□□□□□ -1.66
PCM1-202ENST00000327578 DNAH5Q8TE73 4624 aa4.68□□□□□ -1.66
PCM1-202ENST00000327578 MT1XP80297 61 aa4.65□□□□□ -1.66
PCM1-202ENST00000327578 LRP1BQ9NZR2 4599 aa4.65□□□□□ -1.67
PCM1-202ENST00000327578 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
PCM1-202ENST00000327578 FAT1Q14517 4588 aa4.62□□□□□ -1.67
PCM1-202ENST00000327578 PKHD1L1Q86WI1 4243 aa4.62□□□□□ -1.67
PCM1-202ENST00000327578 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
PCM1-202ENST00000327578 APOBP04114 4563 aaKnown RBP4.6□□□□□ -1.67
PCM1-202ENST00000327578 KRTAP19-1Q8IUB9 90 aa4.6□□□□□ -1.67
PCM1-202ENST00000327578 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
PCM1-202ENST00000327578 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
PCM1-202ENST00000327578 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
PCM1-202ENST00000327578 SACSQ9NZJ4 4579 aa4.49□□□□□ -1.69
PCM1-202ENST00000327578 PRM1P04553 51 aa4.48□□□□□ -1.69
PCM1-202ENST00000327578 MT1BP07438 61 aa4.43□□□□□ -1.7
PCM1-202ENST00000327578 TNXBP22105 4242 aa4.42□□□□□ -1.7
PCM1-202ENST00000327578 DYNC1H1Q14204 4646 aaKnown RBP4.42□□□□□ -1.7
PCM1-202ENST00000327578 PKHD1P08F94 4074 aa4.4□□□□□ -1.7
PCM1-202ENST00000327578 LCE2CQ5TA81 110 aa4.39□□□□□ -1.71
PCM1-202ENST00000327578 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
PCM1-202ENST00000327578 LRP1Q07954 4544 aaKnown RBP4.36□□□□□ -1.71
PCM1-202ENST00000327578 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
PCM1-202ENST00000327578 FAT3Q8TDW7 4589 aa4.33□□□□□ -1.72
PCM1-202ENST00000327578 MT1LQ93083 61 aa4.33□□□□□ -1.72
PCM1-202ENST00000327578 LPAP08519 4548 aa4.32□□□□□ -1.72
PCM1-202ENST00000327578 LCE2DQ5TA82 110 aaPredicted RBP4.31□□□□□ -1.72
PCM1-202ENST00000327578 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
PCM1-202ENST00000327578 MT4P47944 62 aa4.24□□□□□ -1.73
PCM1-202ENST00000327578 KRTAP9-3Q9BYQ3 159 aa4.23□□□□□ -1.73
PCM1-202ENST00000327578 HSPG2P98160 4391 aa4.22□□□□□ -1.73
PCM1-202ENST00000327578 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
PCM1-202ENST00000327578 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
PCM1-202ENST00000327578 MT1EP04732 61 aa4.19□□□□□ -1.74
PCM1-202ENST00000327578 MT3P25713 68 aa4.19□□□□□ -1.74
PCM1-202ENST00000327578 MYCBP2O75592 4640 aa4.19□□□□□ -1.74
PCM1-202ENST00000327578 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
PCM1-202ENST00000327578 KRTAP17-1Q9BYP8 105 aa4.1□□□□□ -1.75
PCM1-202ENST00000327578 MT1MQ8N339 61 aa4.08□□□□□ -1.76
PCM1-202ENST00000327578 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
PCM1-202ENST00000327578 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
PCM1-202ENST00000327578 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
PCM1-202ENST00000327578 LRP2P98164 4655 aa3.9□□□□□ -1.78
PCM1-202ENST00000327578 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
PCM1-202ENST00000327578 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
PCM1-202ENST00000327578 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
PCM1-202ENST00000327578 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
PCM1-202ENST00000327578 DNHD1Q96M86 4753 aa3.86□□□□□ -1.79
PCM1-202ENST00000327578 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
PCM1-202ENST00000327578 MUC17Q685J3 4493 aa3.81□□□□□ -1.8
PCM1-202ENST00000327578 RYR1P21817 5038 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms