RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 APOBP04114 4563 aaKnown RBP5.33□□□□□ -1.56
SP1-201ENST00000327443 VPS13BQ7Z7G8 4022 aa5.33□□□□□ -1.56
SP1-201ENST00000327443 PKHD1P08F94 4074 aa5.28□□□□□ -1.56
SP1-201ENST00000327443 KRTAP13-2Q52LG2 175 aa5.28□□□□□ -1.56
SP1-201ENST00000327443 COX6B2Q6YFQ2 88 aa5.28□□□□□ -1.56
SP1-201ENST00000327443 KMT2CQ8NEZ4 4911 aaKnown RBP5.28□□□□□ -1.56
SP1-201ENST00000327443 RPL37P61927 97 aaKnown RBP5.26□□□□□ -1.57
SP1-201ENST00000327443 A0A0D9SG42 100 aa5.23□□□□□ -1.57
SP1-201ENST00000327443 RYR3Q15413 4870 aa5.19□□□□□ -1.58
SP1-201ENST00000327443 Q5VSD8 79 aa5.18□□□□□ -1.58
SP1-201ENST00000327443 RYR1P21817 5038 aa5.17□□□□□ -1.58
SP1-201ENST00000327443 SMR3BP02814 79 aaPredicted RBP5.17□□□□□ -1.58
SP1-201ENST00000327443 HSPG2P98160 4391 aa5.17□□□□□ -1.58
SP1-201ENST00000327443 KRTAP10-8P60410 259 aa5.16□□□□□ -1.58
SP1-201ENST00000327443 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
SP1-201ENST00000327443 KRTAP3-1Q9BYR8 98 aa5.08□□□□□ -1.6
SP1-201ENST00000327443 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
SP1-201ENST00000327443 FAT1Q14517 4588 aa5.06□□□□□ -1.6
SP1-201ENST00000327443 TNXBP22105 4242 aa5.06□□□□□ -1.6
SP1-201ENST00000327443 CAMK2N1Q7Z7J9 78 aa5.06□□□□□ -1.6
SP1-201ENST00000327443 S4R3F8 94 aa5.05□□□□□ -1.6
SP1-201ENST00000327443 FAT3Q8TDW7 4589 aa5.05□□□□□ -1.6
SP1-201ENST00000327443 MT1HL1P0DM35 61 aa5.03□□□□□ -1.6
SP1-201ENST00000327443 KRTAP17-1Q9BYP8 105 aa5.03□□□□□ -1.6
SP1-201ENST00000327443 KRTAP3-2Q9BYR7 98 aa5.03□□□□□ -1.6
SP1-201ENST00000327443 XP32Q5T750 250 aa5.02□□□□□ -1.61
SP1-201ENST00000327443 C9orf92A6NGG3 77 aa5.01□□□□□ -1.61
SP1-201ENST00000327443 KRTAP12-2P59991 146 aa5.01□□□□□ -1.61
SP1-201ENST00000327443 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
SP1-201ENST00000327443 BIRC6Q9NR09 4857 aa4.98□□□□□ -1.61
SP1-201ENST00000327443 EPPK1P58107 5090 aaKnown RBP4.97□□□□□ -1.61
SP1-201ENST00000327443 HERC2O95714 4834 aa4.94□□□□□ -1.62
SP1-201ENST00000327443 KIAA1109Q2LD37 5005 aa4.93□□□□□ -1.62
SP1-201ENST00000327443 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
SP1-201ENST00000327443 KRTAP4-5Q9BYR2 181 aa4.87□□□□□ -1.63
SP1-201ENST00000327443 PRO2289Q9P1D8 64 aa4.87□□□□□ -1.63
SP1-201ENST00000327443 LRP1Q07954 4544 aaKnown RBP4.86□□□□□ -1.63
SP1-201ENST00000327443 MYCBP2O75592 4640 aa4.83□□□□□ -1.64
SP1-201ENST00000327443 KRTAP3-3Q9BYR6 98 aa4.78□□□□□ -1.64
SP1-201ENST00000327443 R4GN34 69 aa4.78□□□□□ -1.64
SP1-201ENST00000327443 ABCA13Q86UQ4 5058 aa4.76□□□□□ -1.65
SP1-201ENST00000327443 MUC17Q685J3 4493 aa4.74□□□□□ -1.65
SP1-201ENST00000327443 LPAP08519 4548 aa4.64□□□□□ -1.67
SP1-201ENST00000327443 PCLOQ9Y6V0 5065 aa4.62□□□□□ -1.67
SP1-201ENST00000327443 LRP2P98164 4655 aa4.58□□□□□ -1.68
SP1-201ENST00000327443 M0QZ58 72 aa4.57□□□□□ -1.68
SP1-201ENST00000327443 INE1O15225 51 aa4.57□□□□□ -1.68
SP1-201ENST00000327443 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
SP1-201ENST00000327443 HMCN2Q8NDA2 5059 aa4.52□□□□□ -1.69
SP1-201ENST00000327443 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
SP1-201ENST00000327443 HERC1Q15751 4861 aa4.51□□□□□ -1.69
SP1-201ENST00000327443 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
SP1-201ENST00000327443 KRTAP19-2Q3LHN2 52 aa4.48□□□□□ -1.69
SP1-201ENST00000327443 KRTAP4-1Q9BYQ7 146 aa4.47□□□□□ -1.69
SP1-201ENST00000327443 LCE2DQ5TA82 110 aaPredicted RBP4.38□□□□□ -1.71
SP1-201ENST00000327443 FLGP20930 4061 aaPredicted RBP4.36□□□□□ -1.71
SP1-201ENST00000327443 LCE2CQ5TA81 110 aa4.33□□□□□ -1.72
SP1-201ENST00000327443 MUC2Q02817 5179 aa4.31□□□□□ -1.72
SP1-201ENST00000327443 LORP23490 312 aaPredicted RBP4.28□□□□□ -1.72
SP1-201ENST00000327443 RNF213Q63HN8 5207 aa4.23□□□□□ -1.73
SP1-201ENST00000327443 MT1HP80294 61 aa4.22□□□□□ -1.73
SP1-201ENST00000327443 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
SP1-201ENST00000327443 TNP1P09430 55 aa4.16□□□□□ -1.74
SP1-201ENST00000327443 UBR4Q5T4S7 5183 aa4.12□□□□□ -1.75
SP1-201ENST00000327443 FAT4Q6V0I7 4981 aa4.1□□□□□ -1.75
SP1-201ENST00000327443 SPRR2GQ9BYE4 73 aa4.09□□□□□ -1.75
SP1-201ENST00000327443 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
SP1-201ENST00000327443 M0R2T5 61 aa4.07□□□□□ -1.76
SP1-201ENST00000327443 MT2AP02795 61 aa4.06□□□□□ -1.76
SP1-201ENST00000327443 MT1FP04733 61 aa4.01□□□□□ -1.77
SP1-201ENST00000327443 KRTAP19-8Q3LI54 63 aa4□□□□□ -1.77
SP1-201ENST00000327443 LCE2BO14633 110 aa3.99□□□□□ -1.77
SP1-201ENST00000327443 KRTAP19-1Q8IUB9 90 aa3.99□□□□□ -1.77
SP1-201ENST00000327443 KRTAP10-10P60014 251 aa3.97□□□□□ -1.77
SP1-201ENST00000327443 KRTAP9-3Q9BYQ3 159 aa3.95□□□□□ -1.78
SP1-201ENST00000327443 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
SP1-201ENST00000327443 MT1BP07438 61 aa3.85□□□□□ -1.79
SP1-201ENST00000327443 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
SP1-201ENST00000327443 MT1XP80297 61 aa3.72□□□□□ -1.81
SP1-201ENST00000327443 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
SP1-201ENST00000327443 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
SP1-201ENST00000327443 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
SP1-201ENST00000327443 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
SP1-201ENST00000327443 USH2AO75445 5202 aa3.63□□□□□ -1.83
SP1-201ENST00000327443 KMT2DO14686 5537 aa3.61□□□□□ -1.83
SP1-201ENST00000327443 KRTAP9-2Q9BYQ4 174 aa3.57□□□□□ -1.84
SP1-201ENST00000327443 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
SP1-201ENST00000327443 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
SP1-201ENST00000327443 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
SP1-201ENST00000327443 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
SP1-201ENST00000327443 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
SP1-201ENST00000327443 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
SP1-201ENST00000327443 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
SP1-201ENST00000327443 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
SP1-201ENST00000327443 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
SP1-201ENST00000327443 CRCT1Q9UGL9 99 aa3.39□□□□□ -1.87
SP1-201ENST00000327443 FSIP2Q5CZC0 6907 aa3.39□□□□□ -1.87
SP1-201ENST00000327443 KRTAP4-8A0A0G2JLE6 195 aa3.38□□□□□ -1.87
SP1-201ENST00000327443 KRTAP4-8Q9BYQ9 185 aa3.38□□□□□ -1.87
SP1-201ENST00000327443 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms