RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 LINC00304Q8N9R0 145 aa5.8□□□□□ -1.48
ABCF1-201ENST00000326195 HERC1Q15751 4861 aa5.8□□□□□ -1.48
ABCF1-201ENST00000326195 ROMO1P60602 79 aa5.79□□□□□ -1.48
ABCF1-201ENST00000326195 CRIPTQ9P021 101 aa5.76□□□□□ -1.49
ABCF1-201ENST00000326195 KRTAP25-1Q3LHN0 102 aa5.75□□□□□ -1.49
ABCF1-201ENST00000326195 C9orf92A6NGG3 77 aa5.75□□□□□ -1.49
ABCF1-201ENST00000326195 A8MUU9 505 aa5.72□□□□□ -1.49
ABCF1-201ENST00000326195 P0C880 135 aa5.72□□□□□ -1.49
ABCF1-201ENST00000326195 PKHD1L1Q86WI1 4243 aa5.72□□□□□ -1.49
ABCF1-201ENST00000326195 H0YAA0 97 aa5.72□□□□□ -1.49
ABCF1-201ENST00000326195 MT1HL1P0DM35 61 aa5.69□□□□□ -1.5
ABCF1-201ENST00000326195 KRTAP10-8P60410 259 aa5.67□□□□□ -1.5
ABCF1-201ENST00000326195 KRTAP16-1A8MUX0 517 aa5.65□□□□□ -1.5
ABCF1-201ENST00000326195 LRP2P98164 4655 aa5.65□□□□□ -1.51
ABCF1-201ENST00000326195 LPAP08519 4548 aa5.63□□□□□ -1.51
ABCF1-201ENST00000326195 TNXBP22105 4242 aa5.61□□□□□ -1.51
ABCF1-201ENST00000326195 A0A1B0GU33 70 aa5.54□□□□□ -1.52
ABCF1-201ENST00000326195 UBR4Q5T4S7 5183 aa5.52□□□□□ -1.53
ABCF1-201ENST00000326195 RPS29P62273 56 aaKnown RBP5.51□□□□□ -1.53
ABCF1-201ENST00000326195 RNF213Q63HN8 5207 aa5.51□□□□□ -1.53
ABCF1-201ENST00000326195 MUC2Q02817 5179 aa5.5□□□□□ -1.53
ABCF1-201ENST00000326195 H1FX-AS1Q4G0G2 97 aa5.5□□□□□ -1.53
ABCF1-201ENST00000326195 K7ERS5 55 aa5.5□□□□□ -1.53
ABCF1-201ENST00000326195 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
ABCF1-201ENST00000326195 TPRXLQ17RH7 258 aa5.46□□□□□ -1.53
ABCF1-201ENST00000326195 NDUFAF8A1L188 74 aa5.46□□□□□ -1.54
ABCF1-201ENST00000326195 SPINT4Q6UDR6 99 aa5.44□□□□□ -1.54
ABCF1-201ENST00000326195 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
ABCF1-201ENST00000326195 C20orf166-AS1Q96NR2 134 aa5.43□□□□□ -1.54
ABCF1-201ENST00000326195 COX6B2Q6YFQ2 88 aa5.42□□□□□ -1.54
ABCF1-201ENST00000326195 HMCN2Q8NDA2 5059 aa5.4□□□□□ -1.55
ABCF1-201ENST00000326195 XP32Q5T750 250 aa5.39□□□□□ -1.55
ABCF1-201ENST00000326195 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
ABCF1-201ENST00000326195 KRTAP13-4Q3LI77 160 aa5.35□□□□□ -1.55
ABCF1-201ENST00000326195 A0A0D9SG42 100 aa5.33□□□□□ -1.56
ABCF1-201ENST00000326195 RPL37P61927 97 aaKnown RBP5.29□□□□□ -1.56
ABCF1-201ENST00000326195 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
ABCF1-201ENST00000326195 A0A0A0MQY5 61 aa5.27□□□□□ -1.57
ABCF1-201ENST00000326195 FAT4Q6V0I7 4981 aa5.27□□□□□ -1.57
ABCF1-201ENST00000326195 S4R3F8 94 aa5.27□□□□□ -1.57
ABCF1-201ENST00000326195 SEC61BP60468 96 aaKnown RBP5.24□□□□□ -1.57
ABCF1-201ENST00000326195 KRTAP4-1Q9BYQ7 146 aa5.22□□□□□ -1.57
ABCF1-201ENST00000326195 KRTAP3-2Q9BYR7 98 aa5.2□□□□□ -1.58
ABCF1-201ENST00000326195 KRTAP3-3Q9BYR6 98 aa5.19□□□□□ -1.58
ABCF1-201ENST00000326195 KRTAP12-2P59991 146 aa5.18□□□□□ -1.58
ABCF1-201ENST00000326195 M0R2T5 61 aa5.11□□□□□ -1.59
ABCF1-201ENST00000326195 KRTAP12-1P59990 96 aa5.06□□□□□ -1.6
ABCF1-201ENST00000326195 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
ABCF1-201ENST00000326195 R4GN34 69 aa5□□□□□ -1.61
ABCF1-201ENST00000326195 M0QZ58 72 aa4.99□□□□□ -1.61
ABCF1-201ENST00000326195 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
ABCF1-201ENST00000326195 FSIP2Q5CZC0 6907 aa4.98□□□□□ -1.61
ABCF1-201ENST00000326195 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
ABCF1-201ENST00000326195 LCE2CQ5TA81 110 aa4.85□□□□□ -1.63
ABCF1-201ENST00000326195 CAMK2N1Q7Z7J9 78 aa4.85□□□□□ -1.63
ABCF1-201ENST00000326195 KRTAP19-2Q3LHN2 52 aa4.84□□□□□ -1.64
ABCF1-201ENST00000326195 MT1HP80294 61 aa4.82□□□□□ -1.64
ABCF1-201ENST00000326195 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
ABCF1-201ENST00000326195 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
ABCF1-201ENST00000326195 LORP23490 312 aaPredicted RBP4.7□□□□□ -1.66
ABCF1-201ENST00000326195 USH2AO75445 5202 aa4.69□□□□□ -1.66
ABCF1-201ENST00000326195 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
ABCF1-201ENST00000326195 MT1FP04733 61 aa4.62□□□□□ -1.67
ABCF1-201ENST00000326195 MT2AP02795 61 aa4.61□□□□□ -1.67
ABCF1-201ENST00000326195 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
ABCF1-201ENST00000326195 TNP1P09430 55 aa4.54□□□□□ -1.68
ABCF1-201ENST00000326195 PP632Q6XCG6 107 aa4.53□□□□□ -1.68
ABCF1-201ENST00000326195 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
ABCF1-201ENST00000326195 LCE2BO14633 110 aa4.41□□□□□ -1.7
ABCF1-201ENST00000326195 KRTAP19-1Q8IUB9 90 aa4.4□□□□□ -1.7
ABCF1-201ENST00000326195 KRTAP9-3Q9BYQ3 159 aa4.4□□□□□ -1.71
ABCF1-201ENST00000326195 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
ABCF1-201ENST00000326195 SSPOA2VEC9 5147 aa4.37□□□□□ -1.71
ABCF1-201ENST00000326195 PRO2289Q9P1D8 64 aa4.36□□□□□ -1.71
ABCF1-201ENST00000326195 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
ABCF1-201ENST00000326195 KMT2DO14686 5537 aa4.27□□□□□ -1.73
ABCF1-201ENST00000326195 MT1BP07438 61 aa4.26□□□□□ -1.73
ABCF1-201ENST00000326195 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
ABCF1-201ENST00000326195 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
ABCF1-201ENST00000326195 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
ABCF1-201ENST00000326195 CRCT1Q9UGL9 99 aa4.17□□□□□ -1.74
ABCF1-201ENST00000326195 INE1O15225 51 aa4.17□□□□□ -1.74
ABCF1-201ENST00000326195 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
ABCF1-201ENST00000326195 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
ABCF1-201ENST00000326195 LCE3AQ5TA76 89 aa4.15□□□□□ -1.74
ABCF1-201ENST00000326195 LCE2DQ5TA82 110 aaPredicted RBP4.15□□□□□ -1.75
ABCF1-201ENST00000326195 MT1XP80297 61 aa4.09□□□□□ -1.75
ABCF1-201ENST00000326195 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
ABCF1-201ENST00000326195 KRTAP9-6A0A140TA67 174 aa4.05□□□□□ -1.76
ABCF1-201ENST00000326195 KRTAP4-8A0A0G2JLE6 195 aa4.04□□□□□ -1.76
ABCF1-201ENST00000326195 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
ABCF1-201ENST00000326195 KRTAP4-8Q9BYQ9 185 aa4.04□□□□□ -1.76
ABCF1-201ENST00000326195 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
ABCF1-201ENST00000326195 KRTAP12-3P60328 96 aa4□□□□□ -1.77
ABCF1-201ENST00000326195 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
ABCF1-201ENST00000326195 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
ABCF1-201ENST00000326195 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
ABCF1-201ENST00000326195 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
ABCF1-201ENST00000326195 MDN1Q9NU22 5596 aa3.86□□□□□ -1.79
ABCF1-201ENST00000326195 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms