RNA–Protein interactions for RNA: ENST00000325222.8

CUL1-201, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 3,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-201ENST00000325222 TPRXLQ17RH7 258 aa7.63□□□□□ -1.19
CUL1-201ENST00000325222 A0A0D9SG42 100 aa7.63□□□□□ -1.19
CUL1-201ENST00000325222 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
CUL1-201ENST00000325222 KRTAP13-4Q3LI77 160 aa7.58□□□□□ -1.2
CUL1-201ENST00000325222 KRTAP10-6P60371 365 aaPredicted RBP7.57□□□□□ -1.2
CUL1-201ENST00000325222 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
CUL1-201ENST00000325222 FAT3Q8TDW7 4589 aa7.54□□□□□ -1.2
CUL1-201ENST00000325222 HSPG2P98160 4391 aa7.54□□□□□ -1.2
CUL1-201ENST00000325222 RPL37P61927 97 aaKnown RBP7.52□□□□□ -1.21
CUL1-201ENST00000325222 KRTAP15-1Q3LI76 137 aa7.52□□□□□ -1.21
CUL1-201ENST00000325222 KRTAP3-2Q9BYR7 98 aa7.5□□□□□ -1.21
CUL1-201ENST00000325222 LRP1Q07954 4544 aaKnown RBP7.48□□□□□ -1.21
CUL1-201ENST00000325222 KRTAP21-3Q3LHN1 58 aa7.46□□□□□ -1.21
CUL1-201ENST00000325222 TNXBP22105 4242 aa7.46□□□□□ -1.22
CUL1-201ENST00000325222 KRTAP10-8P60410 259 aa7.45□□□□□ -1.22
CUL1-201ENST00000325222 MYCBP2O75592 4640 aa7.44□□□□□ -1.22
CUL1-201ENST00000325222 A0A1B0GVY2 172 aa7.39□□□□□ -1.23
CUL1-201ENST00000325222 S4R3F8 94 aa7.32□□□□□ -1.24
CUL1-201ENST00000325222 KRTAP12-2P59991 146 aa7.31□□□□□ -1.24
CUL1-201ENST00000325222 RYR2Q92736 4967 aa7.31□□□□□ -1.24
CUL1-201ENST00000325222 LUZP6Q538Z0 58 aa7.3□□□□□ -1.24
CUL1-201ENST00000325222 XP32Q5T750 250 aa7.27□□□□□ -1.25
CUL1-201ENST00000325222 LPAP08519 4548 aa7.27□□□□□ -1.25
CUL1-201ENST00000325222 KMT2CQ8NEZ4 4911 aaKnown RBP7.23□□□□□ -1.25
CUL1-201ENST00000325222 KRTAP12-1P59990 96 aa7.21□□□□□ -1.25
CUL1-201ENST00000325222 KRTAP17-1Q9BYP8 105 aa7.12□□□□□ -1.27
CUL1-201ENST00000325222 LRP2P98164 4655 aa7.12□□□□□ -1.27
CUL1-201ENST00000325222 RYR1P21817 5038 aa7.08□□□□□ -1.28
CUL1-201ENST00000325222 Q5VSD8 79 aa7.06□□□□□ -1.28
CUL1-201ENST00000325222 PLAC4Q8WY50 150 aa7□□□□□ -1.29
CUL1-201ENST00000325222 MT1HL1P0DM35 61 aa6.99□□□□□ -1.29
CUL1-201ENST00000325222 M0QZ58 72 aa6.99□□□□□ -1.29
CUL1-201ENST00000325222 KIAA1109Q2LD37 5005 aa6.96□□□□□ -1.3
CUL1-201ENST00000325222 RYR3Q15413 4870 aa6.94□□□□□ -1.3
CUL1-201ENST00000325222 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
CUL1-201ENST00000325222 LORP23490 312 aaPredicted RBP6.86□□□□□ -1.31
CUL1-201ENST00000325222 R4GN34 69 aa6.8□□□□□ -1.32
CUL1-201ENST00000325222 MUC17Q685J3 4493 aa6.78□□□□□ -1.32
CUL1-201ENST00000325222 EPPK1P58107 5090 aaKnown RBP6.69□□□□□ -1.34
CUL1-201ENST00000325222 KRTAP4-1Q9BYQ7 146 aa6.67□□□□□ -1.34
CUL1-201ENST00000325222 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
CUL1-201ENST00000325222 KRTAP4-5Q9BYR2 181 aa6.58□□□□□ -1.36
CUL1-201ENST00000325222 KRTAP19-2Q3LHN2 52 aa6.57□□□□□ -1.36
CUL1-201ENST00000325222 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
CUL1-201ENST00000325222 MUC2Q02817 5179 aa6.48□□□□□ -1.37
CUL1-201ENST00000325222 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
CUL1-201ENST00000325222 FLGP20930 4061 aaPredicted RBP6.4□□□□□ -1.38
CUL1-201ENST00000325222 HERC1Q15751 4861 aa6.34□□□□□ -1.4
CUL1-201ENST00000325222 PCLOQ9Y6V0 5065 aa6.33□□□□□ -1.4
CUL1-201ENST00000325222 HERC2O95714 4834 aa6.32□□□□□ -1.4
CUL1-201ENST00000325222 TNP1P09430 55 aa6.26□□□□□ -1.41
CUL1-201ENST00000325222 SPRR5A0A1B0GTR4 108 aa6.25□□□□□ -1.41
CUL1-201ENST00000325222 BIRC6Q9NR09 4857 aa6.25□□□□□ -1.41
CUL1-201ENST00000325222 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
CUL1-201ENST00000325222 J3QL48 77 aa6.19□□□□□ -1.42
CUL1-201ENST00000325222 KRTAP23-1A1A580 65 aa6.18□□□□□ -1.42
CUL1-201ENST00000325222 FAT4Q6V0I7 4981 aa6.16□□□□□ -1.42
CUL1-201ENST00000325222 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
CUL1-201ENST00000325222 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
CUL1-201ENST00000325222 SPRR2GQ9BYE4 73 aa6.02□□□□□ -1.44
CUL1-201ENST00000325222 HMCN2Q8NDA2 5059 aa6.02□□□□□ -1.45
CUL1-201ENST00000325222 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
CUL1-201ENST00000325222 INE1O15225 51 aa5.98□□□□□ -1.45
CUL1-201ENST00000325222 UBR4Q5T4S7 5183 aa5.93□□□□□ -1.46
CUL1-201ENST00000325222 RNF213Q63HN8 5207 aa5.86□□□□□ -1.47
CUL1-201ENST00000325222 MT1FP04733 61 aa5.84□□□□□ -1.47
CUL1-201ENST00000325222 MT1HP80294 61 aa5.81□□□□□ -1.48
CUL1-201ENST00000325222 MT2AP02795 61 aa5.8□□□□□ -1.48
CUL1-201ENST00000325222 KRTAP8-1Q8IUC2 63 aa5.8□□□□□ -1.48
CUL1-201ENST00000325222 M0R2T5 61 aa5.79□□□□□ -1.48
CUL1-201ENST00000325222 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
CUL1-201ENST00000325222 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
CUL1-201ENST00000325222 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
CUL1-201ENST00000325222 MT1XP80297 61 aa5.72□□□□□ -1.49
CUL1-201ENST00000325222 KRTAP19-8Q3LI54 63 aa5.71□□□□□ -1.49
CUL1-201ENST00000325222 MT1BP07438 61 aa5.71□□□□□ -1.5
CUL1-201ENST00000325222 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
CUL1-201ENST00000325222 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
CUL1-201ENST00000325222 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
CUL1-201ENST00000325222 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
CUL1-201ENST00000325222 KMT2DO14686 5537 aa5.42□□□□□ -1.54
CUL1-201ENST00000325222 KRTAP19-5Q3LI72 72 aa5.39□□□□□ -1.55
CUL1-201ENST00000325222 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
CUL1-201ENST00000325222 USH2AO75445 5202 aa5.35□□□□□ -1.55
CUL1-201ENST00000325222 KRTAP9-6A8MVA2 160 aa5.31□□□□□ -1.56
CUL1-201ENST00000325222 LCE2BO14633 110 aa5.27□□□□□ -1.57
CUL1-201ENST00000325222 KRTAP4-8A0A0G2JLE6 195 aa5.25□□□□□ -1.57
CUL1-201ENST00000325222 KRTAP4-8Q9BYQ9 185 aa5.25□□□□□ -1.57
CUL1-201ENST00000325222 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
CUL1-201ENST00000325222 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
CUL1-201ENST00000325222 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
CUL1-201ENST00000325222 KRTAP2-1Q9BYU5 128 aa5.12□□□□□ -1.59
CUL1-201ENST00000325222 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
CUL1-201ENST00000325222 MT1LQ93083 61 aa4.95□□□□□ -1.62
CUL1-201ENST00000325222 MT1EP04732 61 aa4.91□□□□□ -1.62
CUL1-201ENST00000325222 LCE2AQ5TA79 106 aaPredicted RBP4.9□□□□□ -1.63
CUL1-201ENST00000325222 SSPOA2VEC9 5147 aa4.82□□□□□ -1.64
CUL1-201ENST00000325222 LOC100996750A0A140TA64 210 aa4.81□□□□□ -1.64
CUL1-201ENST00000325222 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
CUL1-201ENST00000325222 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms