RNA–Protein interactions for RNA: ENST00000319725.9

FUBP3-201, Transcript of far upstream element binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FUBP3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3-201ENST00000319725 RYR3Q15413 4870 aa10.59□□□□□ -0.71
FUBP3-201ENST00000319725 FAT3Q8TDW7 4589 aa10.54□□□□□ -0.72
FUBP3-201ENST00000319725 Q5VSD8 79 aa10.49□□□□□ -0.73
FUBP3-201ENST00000319725 KRTAP10-8P60410 259 aa10.48□□□□□ -0.73
FUBP3-201ENST00000319725 KIAA1109Q2LD37 5005 aa10.47□□□□□ -0.73
FUBP3-201ENST00000319725 K7ERS5 55 aa10.43□□□□□ -0.74
FUBP3-201ENST00000319725 TNXBP22105 4242 aa10.42□□□□□ -0.74
FUBP3-201ENST00000319725 KRTAP13-4Q3LI77 160 aa10.4□□□□□ -0.75
FUBP3-201ENST00000319725 KRTAP25-1Q3LHN0 102 aa10.39□□□□□ -0.75
FUBP3-201ENST00000319725 LPAP08519 4548 aa10.39□□□□□ -0.75
FUBP3-201ENST00000319725 KRTAP3-3Q9BYR6 98 aa10.36□□□□□ -0.75
FUBP3-201ENST00000319725 XP32Q5T750 250 aa10.35□□□□□ -0.75
FUBP3-201ENST00000319725 KRTAP17-1Q9BYP8 105 aa10.34□□□□□ -0.75
FUBP3-201ENST00000319725 KRTAP10-6P60371 365 aaPredicted RBP10.32□□□□□ -0.76
FUBP3-201ENST00000319725 S4R3F8 94 aa10.32□□□□□ -0.76
FUBP3-201ENST00000319725 P0C880 135 aa10.31□□□□□ -0.76
FUBP3-201ENST00000319725 RPL37P61927 97 aaKnown RBP10.31□□□□□ -0.76
FUBP3-201ENST00000319725 RYR1P21817 5038 aa10.28□□□□□ -0.76
FUBP3-201ENST00000319725 LRP2P98164 4655 aa10.27□□□□□ -0.77
FUBP3-201ENST00000319725 EPPK1P58107 5090 aaKnown RBP10.26□□□□□ -0.77
FUBP3-201ENST00000319725 KRTAP3-2Q9BYR7 98 aa10.22□□□□□ -0.77
FUBP3-201ENST00000319725 C10orf95Q9H7T3 257 aa10.2□□□□□ -0.78
FUBP3-201ENST00000319725 ROMO1P60602 79 aa10.19□□□□□ -0.78
FUBP3-201ENST00000319725 SPINT4Q6UDR6 99 aa10.17□□□□□ -0.78
FUBP3-201ENST00000319725 H3BS24 57 aa10.15□□□□□ -0.78
FUBP3-201ENST00000319725 KRTAP12-2P59991 146 aa10.06□□□□□ -0.8
FUBP3-201ENST00000319725 TPRXLQ17RH7 258 aa10.05□□□□□ -0.8
FUBP3-201ENST00000319725 ABCA13Q86UQ4 5058 aa10.04□□□□□ -0.8
FUBP3-201ENST00000319725 MT1HL1P0DM35 61 aa10.02□□□□□ -0.81
FUBP3-201ENST00000319725 KRTAP4-5Q9BYR2 181 aa9.99□□□□□ -0.81
FUBP3-201ENST00000319725 KRTAP12-1P59990 96 aa9.87□□□□□ -0.83
FUBP3-201ENST00000319725 M0QZ58 72 aa9.79□□□□□ -0.84
FUBP3-201ENST00000319725 R4GN34 69 aa9.7□□□□□ -0.86
FUBP3-201ENST00000319725 J3QL48 77 aa9.69□□□□□ -0.86
FUBP3-201ENST00000319725 MUC2Q02817 5179 aa9.68□□□□□ -0.86
FUBP3-201ENST00000319725 HERC2O95714 4834 aa9.68□□□□□ -0.86
FUBP3-201ENST00000319725 LORP23490 312 aaPredicted RBP9.64□□□□□ -0.87
FUBP3-201ENST00000319725 NDUFAF8A1L188 74 aa9.58□□□□□ -0.88
FUBP3-201ENST00000319725 KRTAP4-1Q9BYQ7 146 aa9.53□□□□□ -0.88
FUBP3-201ENST00000319725 MUC17Q685J3 4493 aa9.46□□□□□ -0.9
FUBP3-201ENST00000319725 KRTAP15-1Q3LI76 137 aa9.45□□□□□ -0.9
FUBP3-201ENST00000319725 SEC61BP60468 96 aaKnown RBP9.44□□□□□ -0.9
FUBP3-201ENST00000319725 HERC1Q15751 4861 aa9.38□□□□□ -0.91
FUBP3-201ENST00000319725 CAMK2N1Q7Z7J9 78 aa9.31□□□□□ -0.92
FUBP3-201ENST00000319725 PCLOQ9Y6V0 5065 aa9.29□□□□□ -0.92
FUBP3-201ENST00000319725 BIRC6Q9NR09 4857 aa9.29□□□□□ -0.92
FUBP3-201ENST00000319725 FAT4Q6V0I7 4981 aa9.18□□□□□ -0.94
FUBP3-201ENST00000319725 PLAC4Q8WY50 150 aa9.12□□□□□ -0.95
FUBP3-201ENST00000319725 KRTAP19-2Q3LHN2 52 aa9.07□□□□□ -0.96
FUBP3-201ENST00000319725 RNF213Q63HN8 5207 aa9.05□□□□□ -0.96
FUBP3-201ENST00000319725 FLGP20930 4061 aaPredicted RBP8.99□□□□□ -0.97
FUBP3-201ENST00000319725 HMCN2Q8NDA2 5059 aa8.98□□□□□ -0.97
FUBP3-201ENST00000319725 UBR4Q5T4S7 5183 aa8.91□□□□□ -0.98
FUBP3-201ENST00000319725 M0R2T5 61 aa8.82□□□□□ -1
FUBP3-201ENST00000319725 TNP1P09430 55 aa8.76□□□□□ -1.01
FUBP3-201ENST00000319725 LUZP6Q538Z0 58 aa8.76□□□□□ -1.01
FUBP3-201ENST00000319725 PP632Q6XCG6 107 aa8.74□□□□□ -1.01
FUBP3-201ENST00000319725 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
FUBP3-201ENST00000319725 KRTAP10-10P60014 251 aa8.51□□□□□ -1.05
FUBP3-201ENST00000319725 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
FUBP3-201ENST00000319725 MT1HP80294 61 aa8.43□□□□□ -1.06
FUBP3-201ENST00000319725 LCE3AQ5TA76 89 aa8.4□□□□□ -1.06
FUBP3-201ENST00000319725 MT1FP04733 61 aa8.38□□□□□ -1.07
FUBP3-201ENST00000319725 SPRR2GQ9BYE4 73 aa8.38□□□□□ -1.07
FUBP3-201ENST00000319725 MT2AP02795 61 aa8.32□□□□□ -1.08
FUBP3-201ENST00000319725 A0A0A0MQY5 61 aa8.31□□□□□ -1.08
FUBP3-201ENST00000319725 KRTAP9-8Q9BYQ0 159 aa8.17□□□□□ -1.1
FUBP3-201ENST00000319725 KRTAP23-1A1A580 65 aa8.17□□□□□ -1.1
FUBP3-201ENST00000319725 SPRR5A0A1B0GTR4 108 aa8.13□□□□□ -1.11
FUBP3-201ENST00000319725 USH2AO75445 5202 aa8.11□□□□□ -1.11
FUBP3-201ENST00000319725 MT1BP07438 61 aa8.03□□□□□ -1.12
FUBP3-201ENST00000319725 KMT2DO14686 5537 aa8.03□□□□□ -1.12
FUBP3-201ENST00000319725 KRTAP10-5P60370 271 aa8.02□□□□□ -1.13
FUBP3-201ENST00000319725 MT1XP80297 61 aa8.01□□□□□ -1.13
FUBP3-201ENST00000319725 KRTAP10-7P60409 375 aaPredicted RBP7.96□□□□□ -1.14
FUBP3-201ENST00000319725 KRTAP10-12P60413 245 aa7.95□□□□□ -1.14
FUBP3-201ENST00000319725 KRTAP19-8Q3LI54 63 aa7.92□□□□□ -1.14
FUBP3-201ENST00000319725 KRTAP12-3P60328 96 aa7.92□□□□□ -1.14
FUBP3-201ENST00000319725 KRTAP8-1Q8IUC2 63 aa7.89□□□□□ -1.15
FUBP3-201ENST00000319725 KRTAP9-3Q9BYQ3 159 aa7.79□□□□□ -1.16
FUBP3-201ENST00000319725 FSIP2Q5CZC0 6907 aa7.71□□□□□ -1.17
FUBP3-201ENST00000319725 LCE2BO14633 110 aa7.63□□□□□ -1.19
FUBP3-201ENST00000319725 PRO2289Q9P1D8 64 aa7.63□□□□□ -1.19
FUBP3-201ENST00000319725 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
FUBP3-201ENST00000319725 KRTAP4-8A0A0G2JLE6 195 aa7.59□□□□□ -1.19
FUBP3-201ENST00000319725 KRTAP4-8Q9BYQ9 185 aa7.59□□□□□ -1.19
FUBP3-201ENST00000319725 LCE2AQ5TA79 106 aaPredicted RBP7.53□□□□□ -1.2
FUBP3-201ENST00000319725 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
FUBP3-201ENST00000319725 LCE3CQ5T5A8 94 aa7.38□□□□□ -1.23
FUBP3-201ENST00000319725 KRTAP9-6A8MVA2 160 aa7.27□□□□□ -1.25
FUBP3-201ENST00000319725 INE1O15225 51 aa7.24□□□□□ -1.25
FUBP3-201ENST00000319725 SSPOA2VEC9 5147 aa7.21□□□□□ -1.25
FUBP3-201ENST00000319725 KRTAP19-7Q3SYF9 63 aa7.12□□□□□ -1.27
FUBP3-201ENST00000319725 MUC12Q9UKN1 5478 aa7.02□□□□□ -1.29
FUBP3-201ENST00000319725 DSTQ03001 7570 aaKnown RBP6.99□□□□□ -1.29
FUBP3-201ENST00000319725 FCGBPQ9Y6R7 5405 aaPredicted RBP6.96□□□□□ -1.3
FUBP3-201ENST00000319725 MT1LQ93083 61 aa6.92□□□□□ -1.3
FUBP3-201ENST00000319725 CRCT1Q9UGL9 99 aa6.91□□□□□ -1.3
FUBP3-201ENST00000319725 MT1EP04732 61 aa6.89□□□□□ -1.31
FUBP3-201ENST00000319725 KRTAP4-3Q9BYR4 195 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms