RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
RAPH1-202ENST00000319170 CMYA5Q8N3K9 4069 aa6.01□□□□□ -1.45
RAPH1-202ENST00000319170 DNAH3Q8TD57 4116 aa6□□□□□ -1.45
RAPH1-202ENST00000319170 KRTAP4-5Q9BYR2 181 aa5.98□□□□□ -1.45
RAPH1-202ENST00000319170 ZNF469Q96JG9 3925 aaPredicted RBP5.97□□□□□ -1.45
RAPH1-202ENST00000319170 DNAH7Q8WXX0 4024 aa5.95□□□□□ -1.46
RAPH1-202ENST00000319170 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
RAPH1-202ENST00000319170 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
RAPH1-202ENST00000319170 LYSTQ99698 3801 aa5.86□□□□□ -1.47
RAPH1-202ENST00000319170 KRTAP10-4P60372 401 aaPredicted RBP5.85□□□□□ -1.47
RAPH1-202ENST00000319170 ANK2Q01484 3957 aa5.83□□□□□ -1.48
RAPH1-202ENST00000319170 DNAH2Q9P225 4427 aa5.81□□□□□ -1.48
RAPH1-202ENST00000319170 DNAH1Q9P2D7 4330 aa5.79□□□□□ -1.48
RAPH1-202ENST00000319170 FRAS1Q86XX4 4008 aa5.76□□□□□ -1.49
RAPH1-202ENST00000319170 HECTD4Q9Y4D8 3996 aa5.67□□□□□ -1.5
RAPH1-202ENST00000319170 DNAH6Q9C0G6 4158 aa5.66□□□□□ -1.5
RAPH1-202ENST00000319170 KMT2AQ03164 3969 aa5.65□□□□□ -1.5
RAPH1-202ENST00000319170 VPS13BQ7Z7G8 4022 aa5.62□□□□□ -1.51
RAPH1-202ENST00000319170 KRTAP10-7P60409 375 aaPredicted RBP5.52□□□□□ -1.53
RAPH1-202ENST00000319170 MT1HP80294 61 aa5.51□□□□□ -1.53
RAPH1-202ENST00000319170 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
RAPH1-202ENST00000319170 DNAH9Q9NYC9 4486 aa5.47□□□□□ -1.53
RAPH1-202ENST00000319170 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.53
RAPH1-202ENST00000319170 KRTAP4-1Q9BYQ7 146 aa5.46□□□□□ -1.54
RAPH1-202ENST00000319170 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
RAPH1-202ENST00000319170 FAT2Q9NYQ8 4349 aa5.41□□□□□ -1.54
RAPH1-202ENST00000319170 DNAH10Q8IVF4 4471 aa5.4□□□□□ -1.54
RAPH1-202ENST00000319170 SPRR2GQ9BYE4 73 aa5.4□□□□□ -1.54
RAPH1-202ENST00000319170 PRKDCP78527 4128 aaKnown RBP5.38□□□□□ -1.55
RAPH1-202ENST00000319170 MT2AP02795 61 aa5.37□□□□□ -1.55
RAPH1-202ENST00000319170 DNAH11Q96DT5 4516 aa5.35□□□□□ -1.55
RAPH1-202ENST00000319170 VPS13DQ5THJ4 4388 aa5.28□□□□□ -1.56
RAPH1-202ENST00000319170 DYNC2H1Q8NCM8 4307 aaKnown RBP5.28□□□□□ -1.56
RAPH1-202ENST00000319170 MT1FP04733 61 aa5.27□□□□□ -1.57
RAPH1-202ENST00000319170 DNAH8Q96JB1 4490 aa5.26□□□□□ -1.57
RAPH1-202ENST00000319170 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
RAPH1-202ENST00000319170 SPRR2EP22531 72 aa5.18□□□□□ -1.58
RAPH1-202ENST00000319170 SPRR2BP35325 72 aa5.18□□□□□ -1.58
RAPH1-202ENST00000319170 SPRR2AP35326 72 aa5.18□□□□□ -1.58
RAPH1-202ENST00000319170 STARD9Q9P2P6 4700 aa5.13□□□□□ -1.59
RAPH1-202ENST00000319170 DNAH17Q9UFH2 4485 aa5.12□□□□□ -1.59
RAPH1-202ENST00000319170 PLECQ15149 4684 aaKnown RBP5.08□□□□□ -1.6
RAPH1-202ENST00000319170 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
RAPH1-202ENST00000319170 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
RAPH1-202ENST00000319170 DNAH5Q8TE73 4624 aa5.02□□□□□ -1.61
RAPH1-202ENST00000319170 SPRR2DP22532 72 aa5.01□□□□□ -1.61
RAPH1-202ENST00000319170 MT1GP13640 62 aa5.01□□□□□ -1.61
RAPH1-202ENST00000319170 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
RAPH1-202ENST00000319170 LCE2BO14633 110 aa4.97□□□□□ -1.61
RAPH1-202ENST00000319170 PKHD1P08F94 4074 aa4.9□□□□□ -1.63
RAPH1-202ENST00000319170 PKHD1L1Q86WI1 4243 aa4.9□□□□□ -1.63
RAPH1-202ENST00000319170 MT1XP80297 61 aa4.89□□□□□ -1.63
RAPH1-202ENST00000319170 LRP1BQ9NZR2 4599 aa4.87□□□□□ -1.63
RAPH1-202ENST00000319170 KRTAP19-8Q3LI54 63 aa4.85□□□□□ -1.63
RAPH1-202ENST00000319170 KRTAP19-1Q8IUB9 90 aa4.81□□□□□ -1.64
RAPH1-202ENST00000319170 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
RAPH1-202ENST00000319170 DYNC1H1Q14204 4646 aaKnown RBP4.78□□□□□ -1.64
RAPH1-202ENST00000319170 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
RAPH1-202ENST00000319170 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
RAPH1-202ENST00000319170 PKD1P98161 4303 aa4.71□□□□□ -1.66
RAPH1-202ENST00000319170 FAT1Q14517 4588 aa4.7□□□□□ -1.66
RAPH1-202ENST00000319170 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
RAPH1-202ENST00000319170 MT1BP07438 61 aa4.67□□□□□ -1.66
RAPH1-202ENST00000319170 LCE2CQ5TA81 110 aa4.64□□□□□ -1.67
RAPH1-202ENST00000319170 TNXBP22105 4242 aa4.64□□□□□ -1.67
RAPH1-202ENST00000319170 LRP1Q07954 4544 aaKnown RBP4.63□□□□□ -1.67
RAPH1-202ENST00000319170 APOBP04114 4563 aaKnown RBP4.63□□□□□ -1.67
RAPH1-202ENST00000319170 KRTAP9-8Q9BYQ0 159 aa4.63□□□□□ -1.67
RAPH1-202ENST00000319170 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
RAPH1-202ENST00000319170 SACSQ9NZJ4 4579 aa4.6□□□□□ -1.67
RAPH1-202ENST00000319170 LCE2DQ5TA82 110 aaPredicted RBP4.55□□□□□ -1.68
RAPH1-202ENST00000319170 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
RAPH1-202ENST00000319170 KRTAP17-1Q9BYP8 105 aa4.54□□□□□ -1.68
RAPH1-202ENST00000319170 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
RAPH1-202ENST00000319170 FAT3Q8TDW7 4589 aa4.51□□□□□ -1.69
RAPH1-202ENST00000319170 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
RAPH1-202ENST00000319170 MT4P47944 62 aa4.5□□□□□ -1.69
RAPH1-202ENST00000319170 HSPG2P98160 4391 aa4.49□□□□□ -1.69
RAPH1-202ENST00000319170 MT1LQ93083 61 aa4.48□□□□□ -1.69
RAPH1-202ENST00000319170 PRM1P04553 51 aa4.47□□□□□ -1.69
RAPH1-202ENST00000319170 LPAP08519 4548 aa4.43□□□□□ -1.7
RAPH1-202ENST00000319170 MT1EP04732 61 aa4.41□□□□□ -1.7
RAPH1-202ENST00000319170 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
RAPH1-202ENST00000319170 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
RAPH1-202ENST00000319170 MT3P25713 68 aa4.34□□□□□ -1.72
RAPH1-202ENST00000319170 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
RAPH1-202ENST00000319170 MT1MQ8N339 61 aa4.31□□□□□ -1.72
RAPH1-202ENST00000319170 MYCBP2O75592 4640 aa4.27□□□□□ -1.73
RAPH1-202ENST00000319170 DNHD1Q96M86 4753 aa4.26□□□□□ -1.73
RAPH1-202ENST00000319170 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
RAPH1-202ENST00000319170 RYR3Q15413 4870 aa4.2□□□□□ -1.74
RAPH1-202ENST00000319170 RYR1P21817 5038 aa4.18□□□□□ -1.74
RAPH1-202ENST00000319170 MUC17Q685J3 4493 aa4.13□□□□□ -1.75
RAPH1-202ENST00000319170 RYR2Q92736 4967 aa4.1□□□□□ -1.75
RAPH1-202ENST00000319170 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.76
RAPH1-202ENST00000319170 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
RAPH1-202ENST00000319170 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
RAPH1-202ENST00000319170 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
RAPH1-202ENST00000319170 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
RAPH1-202ENST00000319170 KIAA1109Q2LD37 5005 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms