RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 XP32Q5T750 250 aa6.78□□□□□ -1.32
PTPN6-201ENST00000318974 SPINK7P58062 85 aa6.76□□□□□ -1.33
PTPN6-201ENST00000318974 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
PTPN6-201ENST00000318974 A0A1B0GU69 56 aa6.74□□□□□ -1.33
PTPN6-201ENST00000318974 H3BS24 57 aa6.69□□□□□ -1.34
PTPN6-201ENST00000318974 LINC01554Q52M75 96 aa6.69□□□□□ -1.34
PTPN6-201ENST00000318974 PRAC1Q96KF2 57 aa6.66□□□□□ -1.34
PTPN6-201ENST00000318974 PCLOQ9Y6V0 5065 aa6.66□□□□□ -1.34
PTPN6-201ENST00000318974 UQCR11O14957 56 aa6.61□□□□□ -1.35
PTPN6-201ENST00000318974 ADM2Q7Z4H4 148 aa6.61□□□□□ -1.35
PTPN6-201ENST00000318974 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
PTPN6-201ENST00000318974 SPATA8Q6RVD6 105 aa6.6□□□□□ -1.35
PTPN6-201ENST00000318974 LPAP08519 4548 aa6.58□□□□□ -1.36
PTPN6-201ENST00000318974 SEC61BP60468 96 aaKnown RBP6.57□□□□□ -1.36
PTPN6-201ENST00000318974 MIR22HGQ0VDD5 57 aa6.56□□□□□ -1.36
PTPN6-201ENST00000318974 COX6B2Q6YFQ2 88 aa6.56□□□□□ -1.36
PTPN6-201ENST00000318974 LRP2P98164 4655 aa6.51□□□□□ -1.37
PTPN6-201ENST00000318974 HERC1Q15751 4861 aa6.48□□□□□ -1.37
PTPN6-201ENST00000318974 HMCN2Q8NDA2 5059 aa6.45□□□□□ -1.38
PTPN6-201ENST00000318974 CSAG1Q6PB30 78 aa6.43□□□□□ -1.38
PTPN6-201ENST00000318974 MUC17Q685J3 4493 aa6.42□□□□□ -1.38
PTPN6-201ENST00000318974 A0A1B0GU33 70 aa6.41□□□□□ -1.38
PTPN6-201ENST00000318974 KRTAP4-1Q9BYQ7 146 aa6.41□□□□□ -1.38
PTPN6-201ENST00000318974 H1FX-AS1Q4G0G2 97 aa6.39□□□□□ -1.39
PTPN6-201ENST00000318974 H0YAA0 97 aa6.38□□□□□ -1.39
PTPN6-201ENST00000318974 KRTAP3-3Q9BYR6 98 aa6.34□□□□□ -1.39
PTPN6-201ENST00000318974 S4R3F8 94 aa6.32□□□□□ -1.4
PTPN6-201ENST00000318974 ROMO1P60602 79 aa6.27□□□□□ -1.41
PTPN6-201ENST00000318974 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
PTPN6-201ENST00000318974 KRTAP25-1Q3LHN0 102 aa6.25□□□□□ -1.41
PTPN6-201ENST00000318974 KRTAP19-2Q3LHN2 52 aa6.22□□□□□ -1.41
PTPN6-201ENST00000318974 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
PTPN6-201ENST00000318974 K7ERS5 55 aa6.19□□□□□ -1.42
PTPN6-201ENST00000318974 KRTAP13-4Q3LI77 160 aa6.13□□□□□ -1.43
PTPN6-201ENST00000318974 P0C880 135 aa6.13□□□□□ -1.43
PTPN6-201ENST00000318974 UBR4Q5T4S7 5183 aa6.12□□□□□ -1.43
PTPN6-201ENST00000318974 MUC2Q02817 5179 aa6.11□□□□□ -1.43
PTPN6-201ENST00000318974 RNF213Q63HN8 5207 aa6.09□□□□□ -1.43
PTPN6-201ENST00000318974 LCE2CQ5TA81 110 aa6.09□□□□□ -1.43
PTPN6-201ENST00000318974 A0A0D9SG42 100 aa6.06□□□□□ -1.44
PTPN6-201ENST00000318974 M0QZ58 72 aa6.01□□□□□ -1.45
PTPN6-201ENST00000318974 MT1HP80294 61 aa5.98□□□□□ -1.45
PTPN6-201ENST00000318974 FLGP20930 4061 aaPredicted RBP5.97□□□□□ -1.45
PTPN6-201ENST00000318974 M0R2T5 61 aa5.94□□□□□ -1.46
PTPN6-201ENST00000318974 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
PTPN6-201ENST00000318974 KRTAP12-1P59990 96 aa5.93□□□□□ -1.46
PTPN6-201ENST00000318974 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.47
PTPN6-201ENST00000318974 SPINT4Q6UDR6 99 aa5.89□□□□□ -1.47
PTPN6-201ENST00000318974 CRIPTQ9P021 101 aa5.89□□□□□ -1.47
PTPN6-201ENST00000318974 R4GN34 69 aa5.86□□□□□ -1.47
PTPN6-201ENST00000318974 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
PTPN6-201ENST00000318974 NDUFAF8A1L188 74 aa5.79□□□□□ -1.48
PTPN6-201ENST00000318974 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
PTPN6-201ENST00000318974 LCE2AQ5TA79 106 aaPredicted RBP5.76□□□□□ -1.49
PTPN6-201ENST00000318974 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
PTPN6-201ENST00000318974 MT2AP02795 61 aa5.74□□□□□ -1.49
PTPN6-201ENST00000318974 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
PTPN6-201ENST00000318974 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
PTPN6-201ENST00000318974 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
PTPN6-201ENST00000318974 MT1FP04733 61 aa5.7□□□□□ -1.5
PTPN6-201ENST00000318974 SPRR2GQ9BYE4 73 aa5.6□□□□□ -1.51
PTPN6-201ENST00000318974 KRTAP19-1Q8IUB9 90 aa5.59□□□□□ -1.52
PTPN6-201ENST00000318974 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
PTPN6-201ENST00000318974 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
PTPN6-201ENST00000318974 KRTAP19-8Q3LI54 63 aa5.47□□□□□ -1.53
PTPN6-201ENST00000318974 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
PTPN6-201ENST00000318974 PLAC4Q8WY50 150 aa5.43□□□□□ -1.54
PTPN6-201ENST00000318974 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
PTPN6-201ENST00000318974 LCE2BO14633 110 aa5.4□□□□□ -1.55
PTPN6-201ENST00000318974 MT1BP07438 61 aa5.4□□□□□ -1.55
PTPN6-201ENST00000318974 TNP1P09430 55 aa5.34□□□□□ -1.55
PTPN6-201ENST00000318974 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
PTPN6-201ENST00000318974 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
PTPN6-201ENST00000318974 LCE2DQ5TA82 110 aaPredicted RBP5.26□□□□□ -1.57
PTPN6-201ENST00000318974 MT1XP80297 61 aa5.21□□□□□ -1.58
PTPN6-201ENST00000318974 KRTAP10-5P60370 271 aa5.2□□□□□ -1.58
PTPN6-201ENST00000318974 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
PTPN6-201ENST00000318974 USH2AO75445 5202 aa5.17□□□□□ -1.58
PTPN6-201ENST00000318974 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
PTPN6-201ENST00000318974 KRTAP19-6Q3LI70 58 aa5.08□□□□□ -1.6
PTPN6-201ENST00000318974 LCE3AQ5TA76 89 aa5.03□□□□□ -1.6
PTPN6-201ENST00000318974 SSPOA2VEC9 5147 aa5□□□□□ -1.61
PTPN6-201ENST00000318974 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
PTPN6-201ENST00000318974 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
PTPN6-201ENST00000318974 KRTAP8-1Q8IUC2 63 aa4.96□□□□□ -1.62
PTPN6-201ENST00000318974 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
PTPN6-201ENST00000318974 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
PTPN6-201ENST00000318974 FSIP2Q5CZC0 6907 aa4.89□□□□□ -1.63
PTPN6-201ENST00000318974 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
PTPN6-201ENST00000318974 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
PTPN6-201ENST00000318974 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
PTPN6-201ENST00000318974 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
PTPN6-201ENST00000318974 INE1O15225 51 aa4.73□□□□□ -1.65
PTPN6-201ENST00000318974 KRTAP19-5Q3LI72 72 aa4.7□□□□□ -1.66
PTPN6-201ENST00000318974 KMT2DO14686 5537 aa4.69□□□□□ -1.66
PTPN6-201ENST00000318974 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.67
PTPN6-201ENST00000318974 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
PTPN6-201ENST00000318974 MT1EP04732 61 aa4.57□□□□□ -1.68
PTPN6-201ENST00000318974 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
PTPN6-201ENST00000318974 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms