RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 EPPK1P58107 5090 aaKnown RBP10.79□□□□□ -0.68
TTC39C-202ENST00000317571 MT1HL1P0DM35 61 aa10.78□□□□□ -0.68
TTC39C-202ENST00000317571 LINC01554Q52M75 96 aa10.75□□□□□ -0.69
TTC39C-202ENST00000317571 XP32Q5T750 250 aa10.75□□□□□ -0.69
TTC39C-202ENST00000317571 COX6B2Q6YFQ2 88 aa10.75□□□□□ -0.69
TTC39C-202ENST00000317571 RPL37P61927 97 aaKnown RBP10.74□□□□□ -0.69
TTC39C-202ENST00000317571 H3BS24 57 aa10.69□□□□□ -0.7
TTC39C-202ENST00000317571 H0YAA0 97 aa10.66□□□□□ -0.7
TTC39C-202ENST00000317571 A0A1B0GU33 70 aa10.59□□□□□ -0.71
TTC39C-202ENST00000317571 LPAP08519 4548 aa10.58□□□□□ -0.72
TTC39C-202ENST00000317571 KRTAP3-3Q9BYR6 98 aa10.56□□□□□ -0.72
TTC39C-202ENST00000317571 H1FX-AS1Q4G0G2 97 aa10.55□□□□□ -0.72
TTC39C-202ENST00000317571 LRP2P98164 4655 aa10.54□□□□□ -0.72
TTC39C-202ENST00000317571 CSAG1Q6PB30 78 aa10.51□□□□□ -0.73
TTC39C-202ENST00000317571 KRTAP4-5Q9BYR2 181 aa10.5□□□□□ -0.73
TTC39C-202ENST00000317571 ABCA13Q86UQ4 5058 aa10.48□□□□□ -0.73
TTC39C-202ENST00000317571 TPRXLQ17RH7 258 aa10.39□□□□□ -0.75
TTC39C-202ENST00000317571 KRTAP10-6P60371 365 aaPredicted RBP10.38□□□□□ -0.75
TTC39C-202ENST00000317571 S4R3F8 94 aa10.37□□□□□ -0.75
TTC39C-202ENST00000317571 KRTAP3-2Q9BYR7 98 aa10.34□□□□□ -0.75
TTC39C-202ENST00000317571 KRTAP13-4Q3LI77 160 aa10.27□□□□□ -0.77
TTC39C-202ENST00000317571 K7ERS5 55 aa10.21□□□□□ -0.77
TTC39C-202ENST00000317571 P0C880 135 aa10.21□□□□□ -0.78
TTC39C-202ENST00000317571 KRTAP25-1Q3LHN0 102 aa10.21□□□□□ -0.78
TTC39C-202ENST00000317571 HERC2O95714 4834 aa10.13□□□□□ -0.79
TTC39C-202ENST00000317571 MUC17Q685J3 4493 aa10.11□□□□□ -0.79
TTC39C-202ENST00000317571 A0A0D9SG42 100 aa10.11□□□□□ -0.79
TTC39C-202ENST00000317571 CRIPTQ9P021 101 aa10.11□□□□□ -0.79
TTC39C-202ENST00000317571 ROMO1P60602 79 aa10.08□□□□□ -0.8
TTC39C-202ENST00000317571 KRTAP4-1Q9BYQ7 146 aa10.03□□□□□ -0.8
TTC39C-202ENST00000317571 J3QL48 77 aa9.96□□□□□ -0.81
TTC39C-202ENST00000317571 BIRC6Q9NR09 4857 aa9.95□□□□□ -0.82
TTC39C-202ENST00000317571 SEC61BP60468 96 aaKnown RBP9.94□□□□□ -0.82
TTC39C-202ENST00000317571 KRTAP12-2P59991 146 aa9.87□□□□□ -0.83
TTC39C-202ENST00000317571 KRTAP19-2Q3LHN2 52 aa9.83□□□□□ -0.84
TTC39C-202ENST00000317571 KRTAP12-1P59990 96 aa9.81□□□□□ -0.84
TTC39C-202ENST00000317571 SPINT4Q6UDR6 99 aa9.75□□□□□ -0.85
TTC39C-202ENST00000317571 M0QZ58 72 aa9.75□□□□□ -0.85
TTC39C-202ENST00000317571 C10orf95Q9H7T3 257 aa9.74□□□□□ -0.85
TTC39C-202ENST00000317571 MUC2Q02817 5179 aa9.73□□□□□ -0.85
TTC39C-202ENST00000317571 LORP23490 312 aaPredicted RBP9.7□□□□□ -0.86
TTC39C-202ENST00000317571 HERC1Q15751 4861 aa9.67□□□□□ -0.86
TTC39C-202ENST00000317571 PCLOQ9Y6V0 5065 aa9.65□□□□□ -0.86
TTC39C-202ENST00000317571 HMCN2Q8NDA2 5059 aa9.6□□□□□ -0.87
TTC39C-202ENST00000317571 A0A0A0MQY5 61 aa9.6□□□□□ -0.87
TTC39C-202ENST00000317571 R4GN34 69 aa9.58□□□□□ -0.88
TTC39C-202ENST00000317571 FLGP20930 4061 aaPredicted RBP9.52□□□□□ -0.89
TTC39C-202ENST00000317571 NDUFAF8A1L188 74 aa9.41□□□□□ -0.9
TTC39C-202ENST00000317571 KRTAP15-1Q3LI76 137 aa9.37□□□□□ -0.91
TTC39C-202ENST00000317571 FAT4Q6V0I7 4981 aa9.32□□□□□ -0.92
TTC39C-202ENST00000317571 LCE2CQ5TA81 110 aa9.31□□□□□ -0.92
TTC39C-202ENST00000317571 UBR4Q5T4S7 5183 aa9.16□□□□□ -0.94
TTC39C-202ENST00000317571 RNF213Q63HN8 5207 aa9.16□□□□□ -0.94
TTC39C-202ENST00000317571 CAMK2N1Q7Z7J9 78 aa9.05□□□□□ -0.96
TTC39C-202ENST00000317571 MT1HP80294 61 aa9.03□□□□□ -0.96
TTC39C-202ENST00000317571 KRTAP19-1Q8IUB9 90 aa8.93□□□□□ -0.98
TTC39C-202ENST00000317571 M0R2T5 61 aa8.91□□□□□ -0.98
TTC39C-202ENST00000317571 SPRR2GQ9BYE4 73 aa8.91□□□□□ -0.98
TTC39C-202ENST00000317571 PLAC4Q8WY50 150 aa8.9□□□□□ -0.98
TTC39C-202ENST00000317571 MT1FP04733 61 aa8.85□□□□□ -0.99
TTC39C-202ENST00000317571 MT2AP02795 61 aa8.84□□□□□ -0.99
TTC39C-202ENST00000317571 PP632Q6XCG6 107 aa8.83□□□□□ -1
TTC39C-202ENST00000317571 KRTAP9-8Q9BYQ0 159 aa8.81□□□□□ -1
TTC39C-202ENST00000317571 LUZP6Q538Z0 58 aa8.73□□□□□ -1.01
TTC39C-202ENST00000317571 KRTAP10-10P60014 251 aa8.73□□□□□ -1.01
TTC39C-202ENST00000317571 TNP1P09430 55 aa8.69□□□□□ -1.02
TTC39C-202ENST00000317571 KRTAP19-8Q3LI54 63 aa8.56□□□□□ -1.04
TTC39C-202ENST00000317571 KRTAP23-1A1A580 65 aa8.52□□□□□ -1.05
TTC39C-202ENST00000317571 MT1BP07438 61 aa8.51□□□□□ -1.05
TTC39C-202ENST00000317571 KRTAP9-3Q9BYQ3 159 aa8.44□□□□□ -1.06
TTC39C-202ENST00000317571 KRTAP10-5P60370 271 aa8.39□□□□□ -1.07
TTC39C-202ENST00000317571 MT1XP80297 61 aa8.39□□□□□ -1.07
TTC39C-202ENST00000317571 LCE3AQ5TA76 89 aa8.37□□□□□ -1.07
TTC39C-202ENST00000317571 SPRR5A0A1B0GTR4 108 aa8.29□□□□□ -1.08
TTC39C-202ENST00000317571 LCE2BO14633 110 aa8.17□□□□□ -1.1
TTC39C-202ENST00000317571 LCE2AQ5TA79 106 aaPredicted RBP8.16□□□□□ -1.1
TTC39C-202ENST00000317571 KRTAP10-7P60409 375 aaPredicted RBP8.14□□□□□ -1.11
TTC39C-202ENST00000317571 KRTAP8-1Q8IUC2 63 aa8.13□□□□□ -1.11
TTC39C-202ENST00000317571 KRTAP10-12P60413 245 aa8.08□□□□□ -1.12
TTC39C-202ENST00000317571 USH2AO75445 5202 aa8.06□□□□□ -1.12
TTC39C-202ENST00000317571 PRO2289Q9P1D8 64 aa7.94□□□□□ -1.14
TTC39C-202ENST00000317571 KRTAP12-3P60328 96 aa7.93□□□□□ -1.14
TTC39C-202ENST00000317571 KMT2DO14686 5537 aa7.81□□□□□ -1.16
TTC39C-202ENST00000317571 KRTAP19-5Q3LI72 72 aa7.73□□□□□ -1.17
TTC39C-202ENST00000317571 KRTAP4-8A0A0G2JLE6 195 aa7.71□□□□□ -1.17
TTC39C-202ENST00000317571 KRTAP4-8Q9BYQ9 185 aa7.71□□□□□ -1.17
TTC39C-202ENST00000317571 SSPOA2VEC9 5147 aa7.58□□□□□ -1.2
TTC39C-202ENST00000317571 KRTAP19-7Q3SYF9 63 aa7.49□□□□□ -1.21
TTC39C-202ENST00000317571 LCE3CQ5T5A8 94 aa7.47□□□□□ -1.21
TTC39C-202ENST00000317571 INE1O15225 51 aa7.46□□□□□ -1.22
TTC39C-202ENST00000317571 KRTAP19-6Q3LI70 58 aa7.35□□□□□ -1.23
TTC39C-202ENST00000317571 FSIP2Q5CZC0 6907 aa7.34□□□□□ -1.23
TTC39C-202ENST00000317571 KRTAP4-7Q9BYR0 210 aa7.3□□□□□ -1.24
TTC39C-202ENST00000317571 KRTAP9-6A8MVA2 160 aa7.29□□□□□ -1.24
TTC39C-202ENST00000317571 MT1EP04732 61 aa7.26□□□□□ -1.25
TTC39C-202ENST00000317571 MT1LQ93083 61 aa7.22□□□□□ -1.25
TTC39C-202ENST00000317571 FCGBPQ9Y6R7 5405 aaPredicted RBP7.06□□□□□ -1.28
TTC39C-202ENST00000317571 LCE2DQ5TA82 110 aaPredicted RBP7.01□□□□□ -1.29
TTC39C-202ENST00000317571 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
TTC39C-202ENST00000317571 MUC12Q9UKN1 5478 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms